RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 CDC42BPGQ6DT37 1551 aa10.92□□□□□ -0.66
ATXN3-235ENST00000556082 CEP170BQ9Y4F5 1589 aaPredicted RBP10.92□□□□□ -0.66
ATXN3-235ENST00000556082 SLC4A3P48751 1232 aa10.92□□□□□ -0.66
ATXN3-235ENST00000556082 RUNDC1Q96C34 613 aa10.92□□□□□ -0.66
ATXN3-235ENST00000556082 SLC26A8Q96RN1 970 aa10.92□□□□□ -0.66
ATXN3-235ENST00000556082 GGNBP2Q9H3C7 697 aa10.92□□□□□ -0.66
ATXN3-235ENST00000556082 RCAN3Q9UKA8 241 aa10.92□□□□□ -0.66
ATXN3-235ENST00000556082 APAF1O14727 1248 aa10.91□□□□□ -0.66
ATXN3-235ENST00000556082 CCDC27Q2M243 656 aa10.91□□□□□ -0.66
ATXN3-235ENST00000556082 ANKLE2Q86XL3 938 aa10.91□□□□□ -0.66
ATXN3-235ENST00000556082 C3orf80F5H4A9 247 aa10.9□□□□□ -0.66
ATXN3-235ENST00000556082 TNNT2P45379 298 aaPredicted RBP10.9□□□□□ -0.66
ATXN3-235ENST00000556082 SLFN5Q08AF3 891 aa10.9□□□□□ -0.66
ATXN3-235ENST00000556082 PADI6Q6TGC4 694 aa10.9□□□□□ -0.66
ATXN3-235ENST00000556082 SLF2Q8IX21 1173 aa10.9□□□□□ -0.66
ATXN3-235ENST00000556082 AATKQ6ZMQ8 1374 aa10.9□□□□□ -0.67
ATXN3-235ENST00000556082 PRR36Q9H6K5 1346 aa10.89□□□□□ -0.67
ATXN3-235ENST00000556082 MLLT3P42568 568 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-235ENST00000556082 DUSP27Q5VZP5 1158 aa10.89□□□□□ -0.67
ATXN3-235ENST00000556082 SALL2Q9Y467 1007 aaPredicted RBP10.89□□□□□ -0.67
ATXN3-235ENST00000556082 E9PSI1 815 aa10.88□□□□□ -0.67
ATXN3-235ENST00000556082 RRP1P56182 461 aaKnown RBP10.88□□□□□ -0.67
ATXN3-235ENST00000556082 WDR63Q8IWG1 891 aa10.88□□□□□ -0.67
ATXN3-235ENST00000556082 CCDC146Q8IYE0 955 aa10.88□□□□□ -0.67
ATXN3-235ENST00000556082 EYA1Q99502 592 aa10.88□□□□□ -0.67
ATXN3-235ENST00000556082 PNNQ9H307 717 aaKnown RBP10.88□□□□□ -0.67
ATXN3-235ENST00000556082 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.88□□□□□ -0.67
ATXN3-235ENST00000556082 ANKRD26Q9UPS8 1709 aa10.88□□□□□ -0.67
ATXN3-235ENST00000556082 SETD1BQ9UPS6 1966 aaKnown RBP10.88□□□□□ -0.67
ATXN3-235ENST00000556082 SHPRHQ149N8 1683 aa10.88□□□□□ -0.67
ATXN3-235ENST00000556082 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-235ENST00000556082 SENP3-EIF4A1A0A087X0R7 540 aa10.87□□□□□ -0.67
ATXN3-235ENST00000556082 PTGDRQ13258 359 aa10.87□□□□□ -0.67
ATXN3-235ENST00000556082 TJAP1Q5JTD0 557 aa10.87□□□□□ -0.67
ATXN3-235ENST00000556082 IL21Q9HBE4 155 aa10.87□□□□□ -0.67
ATXN3-235ENST00000556082 ZNF142P52746 1687 aaPredicted RBP10.87□□□□□ -0.67
ATXN3-235ENST00000556082 RIMS1Q86UR5 1692 aaKnown RBP10.87□□□□□ -0.67
ATXN3-235ENST00000556082 XRN1Q8IZH2 1706 aaKnown RBP10.87□□□□□ -0.67
ATXN3-235ENST00000556082 ANKARQ7Z5J8 1434 aa10.86□□□□□ -0.67
ATXN3-235ENST00000556082 IRX6P78412 446 aaPredicted RBP10.86□□□□□ -0.67
ATXN3-235ENST00000556082 PLCB2Q00722 1185 aa10.86□□□□□ -0.67
ATXN3-235ENST00000556082 WWC1Q8IX03 1113 aa10.86□□□□□ -0.67
ATXN3-235ENST00000556082 TCP11L2Q8N4U5 519 aa10.86□□□□□ -0.67
ATXN3-235ENST00000556082 IRX2Q9BZI1 471 aaPredicted RBP10.86□□□□□ -0.67
ATXN3-235ENST00000556082 POLKQ9UBT6 870 aa10.86□□□□□ -0.67
ATXN3-235ENST00000556082 SSH2Q76I76 1423 aa10.85□□□□□ -0.67
ATXN3-235ENST00000556082 DIAPH1O60610 1272 aaKnown RBP10.85□□□□□ -0.67
ATXN3-235ENST00000556082 U2AF1L5P0DN76 240 aaPredicted RBP10.85□□□□□ -0.67
ATXN3-235ENST00000556082 U2AF1Q01081 240 aaKnown RBP eCLIP10.85□□□□□ -0.67
ATXN3-235ENST00000556082 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.85□□□□□ -0.67
ATXN3-235ENST00000556082 COG3Q96JB2 828 aa10.85□□□□□ -0.67
ATXN3-235ENST00000556082 PLEKHF1Q96S99 279 aa10.85□□□□□ -0.67
ATXN3-235ENST00000556082 PRR14Q9BWN1 585 aa10.85□□□□□ -0.67
ATXN3-235ENST00000556082 IQSEC2Q5JU85 1478 aa10.85□□□□□ -0.67
ATXN3-235ENST00000556082 FCHSD2O94868 740 aa10.84□□□□□ -0.67
ATXN3-235ENST00000556082 KCNA6P17658 529 aa10.84□□□□□ -0.67
ATXN3-235ENST00000556082 NME9Q86XW9 330 aa10.84□□□□□ -0.67
ATXN3-235ENST00000556082 KIF20BQ96Q89 1820 aa10.84□□□□□ -0.67
ATXN3-235ENST00000556082 MON2Q7Z3U7 1717 aa10.84□□□□□ -0.67
ATXN3-235ENST00000556082 ACEP12821 1306 aa10.84□□□□□ -0.67
ATXN3-235ENST00000556082 TTC21BQ7Z4L5 1316 aa10.84□□□□□ -0.67
ATXN3-235ENST00000556082 TTC21AQ8NDW8 1320 aa10.84□□□□□ -0.67
ATXN3-235ENST00000556082 TOPAZ1Q8N9V7 1692 aa10.83□□□□□ -0.68
ATXN3-235ENST00000556082 SWT1Q5T5J6 900 aaKnown RBP10.83□□□□□ -0.68
ATXN3-235ENST00000556082 RBM46Q8TBY0 533 aaKnown RBP10.83□□□□□ -0.68
ATXN3-235ENST00000556082 USP6P35125 1406 aa10.83□□□□□ -0.68
ATXN3-235ENST00000556082 AKAP12Q02952 1782 aa10.82□□□□□ -0.68
ATXN3-235ENST00000556082 NKTRP30414 1462 aaKnown RBP10.82□□□□□ -0.68
ATXN3-235ENST00000556082 SMYD5Q6GMV2 418 aa10.82□□□□□ -0.68
ATXN3-235ENST00000556082 MTRQ99707 1265 aa10.82□□□□□ -0.68
ATXN3-235ENST00000556082 CDK12Q9NYV4 1490 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-235ENST00000556082 USP31Q70CQ4 1352 aa10.81□□□□□ -0.68
ATXN3-235ENST00000556082 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
ATXN3-235ENST00000556082 RNF40O75150 1001 aa10.81□□□□□ -0.68
ATXN3-235ENST00000556082 DNAJB2P25686 324 aa10.81□□□□□ -0.68
ATXN3-235ENST00000556082 NPHP4O75161 1426 aaPredicted RBP10.81□□□□□ -0.68
ATXN3-235ENST00000556082 IL16Q14005 1332 aa10.81□□□□□ -0.68
ATXN3-235ENST00000556082 U2SURPO15042 1029 aaKnown RBP10.8□□□□□ -0.68
ATXN3-235ENST00000556082 IL13P35225 146 aa10.8□□□□□ -0.68
ATXN3-235ENST00000556082 APLP1P51693 650 aa10.8□□□□□ -0.68
ATXN3-235ENST00000556082 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.8□□□□□ -0.68
ATXN3-235ENST00000556082 OVOS2A0A0J9YW53 1432 aa10.8□□□□□ -0.68
ATXN3-235ENST00000556082 OVOS2Q6IE36 1432 aa10.8□□□□□ -0.68
ATXN3-235ENST00000556082 CT47B1P0C2W7 299 aaPredicted RBP10.79□□□□□ -0.68
ATXN3-235ENST00000556082 TMPOP42166 694 aaKnown RBP10.79□□□□□ -0.68
ATXN3-235ENST00000556082 MYH16Q9H6N6 1097 aa10.79□□□□□ -0.68
ATXN3-235ENST00000556082 ITSN1Q15811 1721 aa10.78□□□□□ -0.68
ATXN3-235ENST00000556082 NRKQ7Z2Y5 1582 aa10.78□□□□□ -0.68
ATXN3-235ENST00000556082 SEMA3EO15041 775 aa10.78□□□□□ -0.68
ATXN3-235ENST00000556082 RSPH6AQ9H0K4 717 aa10.78□□□□□ -0.68
ATXN3-235ENST00000556082 ADGRG1Q9Y653 693 aa10.78□□□□□ -0.68
ATXN3-235ENST00000556082 CHD2O14647 1828 aaKnown RBP10.78□□□□□ -0.68
ATXN3-235ENST00000556082 MAPK8IP3Q9UPT6 1336 aa10.78□□□□□ -0.68
ATXN3-235ENST00000556082 B4GALNT3Q6L9W6 998 aa10.77□□□□□ -0.69
ATXN3-235ENST00000556082 NGDNQ8NEJ9 315 aaKnown RBP10.77□□□□□ -0.69
ATXN3-235ENST00000556082 CCDC136Q96JN2 1154 aa10.77□□□□□ -0.69
ATXN3-235ENST00000556082 RRP7AQ9Y3A4 280 aaKnown RBP10.77□□□□□ -0.69
ATXN3-235ENST00000556082 EMILIN1Q9Y6C2 1016 aa10.77□□□□□ -0.69
ATXN3-235ENST00000556082 OATP04181 439 aa10.76□□□□□ -0.69
ATXN3-235ENST00000556082 NEFMP07197 916 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms