RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 PLEKHO1Q53GL0 409 aaPredicted RBP24.26■■□□□ 1.47
NPC2-208ENST00000556009 MORC1Q86VD1 984 aa24.26■■□□□ 1.47
NPC2-208ENST00000556009 DCAF5Q96JK2 942 aa24.26■■□□□ 1.47
NPC2-208ENST00000556009 ATP6V1AP38606 617 aa24.25■■□□□ 1.47
NPC2-208ENST00000556009 ITPK1Q13572 414 aa24.25■■□□□ 1.47
NPC2-208ENST00000556009 AMOTQ4VCS5 1084 aa24.25■■□□□ 1.47
NPC2-208ENST00000556009 ZNF831Q5JPB2 1677 aa24.24■■□□□ 1.47
NPC2-208ENST00000556009 PHF14O94880 888 aa24.24■■□□□ 1.47
NPC2-208ENST00000556009 KNSTRNQ9Y448 316 aa24.23■■□□□ 1.47
NPC2-208ENST00000556009 VIRMAQ69YN4 1812 aaKnown RBP24.22■■□□□ 1.47
NPC2-208ENST00000556009 KIAA1551Q9HCM1 1747 aa24.21■■□□□ 1.47
NPC2-208ENST00000556009 MYH14Q7Z406 1995 aaKnown RBP24.2■■□□□ 1.46
NPC2-208ENST00000556009 KDRP35968 1356 aa24.2■■□□□ 1.46
NPC2-208ENST00000556009 KIF13BQ9NQT8 1826 aa24.2■■□□□ 1.46
NPC2-208ENST00000556009 GNPATO15228 680 aa24.2■■□□□ 1.46
NPC2-208ENST00000556009 C4AP0C0L4 1744 aa24.19■■□□□ 1.46
NPC2-208ENST00000556009 ZNF530Q6P9A1 599 aaPredicted RBP24.19■■□□□ 1.46
NPC2-208ENST00000556009 C1QTNF8P60827 252 aa24.18■■□□□ 1.46
NPC2-208ENST00000556009 RC3H1Q5TC82 1133 aaKnown RBP24.18■■□□□ 1.46
NPC2-208ENST00000556009 SLC4A9Q96Q91 983 aa24.18■■□□□ 1.46
NPC2-208ENST00000556009 KDM6AO15550 1401 aaPredicted RBP24.18■■□□□ 1.46
NPC2-208ENST00000556009 SCN11AQ9UI33 1791 aa24.17■■□□□ 1.46
NPC2-208ENST00000556009 IL13P35225 146 aa24.17■■□□□ 1.46
NPC2-208ENST00000556009 AMER1Q5JTC6 1135 aaPredicted RBP24.17■■□□□ 1.46
NPC2-208ENST00000556009 AEBP1Q8IUX7 1158 aa24.17■■□□□ 1.46
NPC2-208ENST00000556009 N4BP2Q86UW6 1770 aaPredicted RBP24.16■■□□□ 1.46
NPC2-208ENST00000556009 MTHFSP49914 203 aa24.16■■□□□ 1.46
NPC2-208ENST00000556009 CABP4P57796 275 aa24.16■■□□□ 1.46
NPC2-208ENST00000556009 C1orf141Q5JVX7 400 aa24.15■■□□□ 1.46
NPC2-208ENST00000556009 TRAPPC3LQ5T215 181 aa24.15■■□□□ 1.46
NPC2-208ENST00000556009 SULT6B1Q6IMI4 303 aa24.15■■□□□ 1.46
NPC2-208ENST00000556009 RBM42Q9BTD8 480 aaKnown RBP24.15■■□□□ 1.46
NPC2-208ENST00000556009 RTCBQ9Y3I0 505 aaKnown RBP24.15■■□□□ 1.46
NPC2-208ENST00000556009 ADRA2BP18089 450 aa24.14■■□□□ 1.45
NPC2-208ENST00000556009 TJP1Q07157 1748 aa24.14■■□□□ 1.45
NPC2-208ENST00000556009 KIF7Q2M1P5 1343 aa24.12■■□□□ 1.45
NPC2-208ENST00000556009 CNTNAP4Q9C0A0 1308 aa24.12■■□□□ 1.45
NPC2-208ENST00000556009 NLGN1Q8N2Q7 840 aa24.12■■□□□ 1.45
NPC2-208ENST00000556009 WWC3Q9ULE0 1092 aa24.12■■□□□ 1.45
NPC2-208ENST00000556009 CICQ96RK0 1608 aaPredicted RBP24.11■■□□□ 1.45
NPC2-208ENST00000556009 SENP3-EIF4A1A0A087X0R7 540 aa24.11■■□□□ 1.45
NPC2-208ENST00000556009 GIGYF1O75420 1035 aaPredicted RBP24.11■■□□□ 1.45
NPC2-208ENST00000556009 RPS6KA4O75676 772 aa24.11■■□□□ 1.45
NPC2-208ENST00000556009 BRCA1P38398 1863 aaKnown RBP24.11■■□□□ 1.45
NPC2-208ENST00000556009 ATP10DQ9P241 1426 aa24.1■■□□□ 1.45
NPC2-208ENST00000556009 MMP10P09238 476 aa24.1■■□□□ 1.45
NPC2-208ENST00000556009 NFATC2IPQ8NCF5 419 aa24.1■■□□□ 1.45
NPC2-208ENST00000556009 ARHGEF1Q92888 912 aaKnown RBP24.1■■□□□ 1.45
NPC2-208ENST00000556009 PER1O15534 1290 aaPredicted RBP24.09■■□□□ 1.45
NPC2-208ENST00000556009 ADCY9O60503 1353 aa24.08■■□□□ 1.45
NPC2-208ENST00000556009 AKAP4Q5JQC9 854 aa24.07■■□□□ 1.44
NPC2-208ENST00000556009 PTCD1O75127 700 aaKnown RBP24.06■■□□□ 1.44
NPC2-208ENST00000556009 GYS1P13807 737 aa24.06■■□□□ 1.44
NPC2-208ENST00000556009 RFC4P35249 363 aa24.06■■□□□ 1.44
NPC2-208ENST00000556009 PXDNLA1KZ92 1463 aa24.06■■□□□ 1.44
NPC2-208ENST00000556009 ADAMTS7Q9UKP4 1686 aa24.05■■□□□ 1.44
NPC2-208ENST00000556009 TGFB2P61812 414 aa24.05■■□□□ 1.44
NPC2-208ENST00000556009 CRKLP46109 303 aaKnown RBP24.02■■□□□ 1.44
NPC2-208ENST00000556009 SLC52A2Q9HAB3 445 aa24.02■■□□□ 1.44
NPC2-208ENST00000556009 C10orf71Q711Q0 1435 aa24.01■■□□□ 1.43
NPC2-208ENST00000556009 LGR6Q9HBX8 967 aa24■■□□□ 1.43
NPC2-208ENST00000556009 CCDC87Q9NVE4 849 aa24■■□□□ 1.43
NPC2-208ENST00000556009 ARFGEF1Q9Y6D6 1849 aa24■■□□□ 1.43
NPC2-208ENST00000556009 DIAPH1O60610 1272 aaKnown RBP23.99■■□□□ 1.43
NPC2-208ENST00000556009 PARP3Q9Y6F1 533 aa23.99■■□□□ 1.43
NPC2-208ENST00000556009 RNMTO43148 476 aaKnown RBP23.98■■□□□ 1.43
NPC2-208ENST00000556009 HMOX1P09601 288 aa23.98■■□□□ 1.43
NPC2-208ENST00000556009 INTS5Q6P9B9 1019 aaKnown RBP23.98■■□□□ 1.43
NPC2-208ENST00000556009 GPBP1L1Q9HC44 474 aaPredicted RBP23.98■■□□□ 1.43
NPC2-208ENST00000556009 NPC1L1Q9UHC9 1359 aa23.98■■□□□ 1.43
NPC2-208ENST00000556009 MRC1P22897 1456 aa23.98■■□□□ 1.43
NPC2-208ENST00000556009 A0A0G2JLW4 131 aa23.97■■□□□ 1.43
NPC2-208ENST00000556009 CC2D1BQ5T0F9 858 aaKnown RBP23.97■■□□□ 1.43
NPC2-208ENST00000556009 USP42Q9H9J4 1324 aaKnown RBP23.96■■□□□ 1.43
NPC2-208ENST00000556009 MTHFSDQ2M296 383 aaKnown RBP23.96■■□□□ 1.43
NPC2-208ENST00000556009 ZNF526Q8TF50 670 aaPredicted RBP23.96■■□□□ 1.43
NPC2-208ENST00000556009 UBR2Q8IWV8 1755 aa23.96■■□□□ 1.43
NPC2-208ENST00000556009 CEP350Q5VT06 3117 aa23.95■■□□□ 1.43
NPC2-208ENST00000556009 AFDNP55196 1824 aaKnown RBP23.95■■□□□ 1.42
NPC2-208ENST00000556009 DPEP1P16444 411 aa23.94■■□□□ 1.42
NPC2-208ENST00000556009 DNAJC10Q8IXB1 793 aa23.94■■□□□ 1.42
NPC2-208ENST00000556009 SRP68Q9UHB9 627 aaKnown RBP23.94■■□□□ 1.42
NPC2-208ENST00000556009 FKBP8Q14318 412 aa23.93■■□□□ 1.42
NPC2-208ENST00000556009 BCS1LQ9Y276 419 aa23.93■■□□□ 1.42
NPC2-208ENST00000556009 KCPQ6ZWJ8 1503 aa23.93■■□□□ 1.42
NPC2-208ENST00000556009 CYP19A1P11511 503 aaPredicted RBP23.92■■□□□ 1.42
NPC2-208ENST00000556009 KCNA3P22001 575 aa23.91■■□□□ 1.42
NPC2-208ENST00000556009 TM4SF1P30408 202 aa23.91■■□□□ 1.42
NPC2-208ENST00000556009 SLC39A6Q13433 755 aa23.91■■□□□ 1.42
NPC2-208ENST00000556009 VSIG10Q8N0Z9 540 aa23.91■■□□□ 1.42
NPC2-208ENST00000556009 SIPA1L3O60292 1781 aaPredicted RBP23.91■■□□□ 1.42
NPC2-208ENST00000556009 COL3A1P02461 1466 aaPredicted RBP23.9■■□□□ 1.42
NPC2-208ENST00000556009 SOS1Q07889 1333 aaPredicted RBP23.89■■□□□ 1.42
NPC2-208ENST00000556009 ZPR1O75312 459 aa23.89■■□□□ 1.41
NPC2-208ENST00000556009 DDR1Q08345 913 aa23.89■■□□□ 1.41
NPC2-208ENST00000556009 FCHSD2O94868 740 aa23.88■■□□□ 1.41
NPC2-208ENST00000556009 SBF1O95248 1867 aa23.87■■□□□ 1.41
NPC2-208ENST00000556009 NRXN2Q9P2S2 1712 aa23.87■■□□□ 1.41
NPC2-208ENST00000556009 POLRMTO00411 1230 aaKnown RBP23.87■■□□□ 1.41
NPC2-208ENST00000556009 ARHGAP27Q6ZUM4 889 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms