RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 GNAI1P63096 354 aa14.36□□□□□ -0.11
TMEM260-208ENST00000555905 DCAF5Q96JK2 942 aa14.36□□□□□ -0.11
TMEM260-208ENST00000555905 LAS1LQ9Y4W2 734 aaKnown RBP14.36□□□□□ -0.11
TMEM260-208ENST00000555905 ADAMTS7Q9UKP4 1686 aa14.36□□□□□ -0.11
TMEM260-208ENST00000555905 CEMIPQ8WUJ3 1361 aa14.35□□□□□ -0.11
TMEM260-208ENST00000555905 TEFQ10587 303 aa14.35□□□□□ -0.11
TMEM260-208ENST00000555905 LGR6Q9HBX8 967 aa14.35□□□□□ -0.11
TMEM260-208ENST00000555905 THSD7AQ9UPZ6 1657 aa14.35□□□□□ -0.11
TMEM260-208ENST00000555905 NKX1-1Q15270 411 aaPredicted RBP14.34□□□□□ -0.11
TMEM260-208ENST00000555905 CFAP44Q96MT7 982 aa14.34□□□□□ -0.11
TMEM260-208ENST00000555905 KDM6AO15550 1401 aaPredicted RBP14.33□□□□□ -0.11
TMEM260-208ENST00000555905 TAF7Q15545 349 aaPredicted RBP14.33□□□□□ -0.12
TMEM260-208ENST00000555905 DUSP27Q5VZP5 1158 aa14.33□□□□□ -0.12
TMEM260-208ENST00000555905 ILDR1Q86SU0 546 aaPredicted RBP14.33□□□□□ -0.12
TMEM260-208ENST00000555905 TRMT2AQ8IZ69 625 aaKnown RBP14.33□□□□□ -0.12
TMEM260-208ENST00000555905 ONECUT3O60422 494 aaPredicted RBP14.32□□□□□ -0.12
TMEM260-208ENST00000555905 ZNF853P0CG23 659 aa14.32□□□□□ -0.12
TMEM260-208ENST00000555905 RBM6P78332 1123 aaKnown RBP14.32□□□□□ -0.12
TMEM260-208ENST00000555905 BABAM1Q9NWV8 329 aa14.32□□□□□ -0.12
TMEM260-208ENST00000555905 FANCIQ9NVI1 1328 aa14.32□□□□□ -0.12
TMEM260-208ENST00000555905 SIPA1L3O60292 1781 aaPredicted RBP14.32□□□□□ -0.12
TMEM260-208ENST00000555905 ERVV-2B6SEH9 535 aa14.31□□□□□ -0.12
TMEM260-208ENST00000555905 CHL1O00533 1208 aa14.31□□□□□ -0.12
TMEM260-208ENST00000555905 CABP4P57796 275 aa14.31□□□□□ -0.12
TMEM260-208ENST00000555905 TSR2Q969E8 191 aaKnown RBP14.31□□□□□ -0.12
TMEM260-208ENST00000555905 SLC52A2Q9HAB3 445 aa14.31□□□□□ -0.12
TMEM260-208ENST00000555905 TSPYL4Q9UJ04 414 aa14.31□□□□□ -0.12
TMEM260-208ENST00000555905 RXRBP28702 533 aa14.3□□□□□ -0.12
TMEM260-208ENST00000555905 SEPT12Q8IYM1 358 aa14.3□□□□□ -0.12
TMEM260-208ENST00000555905 MBIPQ9NS73 344 aa14.3□□□□□ -0.12
TMEM260-208ENST00000555905 MRC1P22897 1456 aa14.3□□□□□ -0.12
TMEM260-208ENST00000555905 BTBD11A6QL63 1104 aa14.29□□□□□ -0.12
TMEM260-208ENST00000555905 MARCH10Q8NA82 808 aaPredicted RBP14.29□□□□□ -0.12
TMEM260-208ENST00000555905 NFATC2IPQ8NCF5 419 aa14.28□□□□□ -0.12
TMEM260-208ENST00000555905 MIS18AQ9NYP9 233 aa14.28□□□□□ -0.12
TMEM260-208ENST00000555905 TOGARAM1Q9Y4F4 1720 aa14.28□□□□□ -0.12
TMEM260-208ENST00000555905 KAT6BQ8WYB5 2073 aa14.27□□□□□ -0.12
TMEM260-208ENST00000555905 ITGB4P16144 1822 aa14.27□□□□□ -0.12
TMEM260-208ENST00000555905 KDM3BQ7LBC6 1761 aa14.27□□□□□ -0.12
TMEM260-208ENST00000555905 DOT1LQ8TEK3 1739 aa14.27□□□□□ -0.12
TMEM260-208ENST00000555905 EXOSC9Q06265 439 aaKnown RBP14.27□□□□□ -0.13
TMEM260-208ENST00000555905 TMOD3Q9NYL9 352 aa14.27□□□□□ -0.13
TMEM260-208ENST00000555905 RGS17Q9UGC6 210 aaPredicted RBP14.27□□□□□ -0.13
TMEM260-208ENST00000555905 CT47B1P0C2W7 299 aaPredicted RBP14.26□□□□□ -0.13
TMEM260-208ENST00000555905 BRWD3Q6RI45 1802 aa14.25□□□□□ -0.13
TMEM260-208ENST00000555905 SYTL4Q96C24 671 aaPredicted RBP14.25□□□□□ -0.13
TMEM260-208ENST00000555905 PRIM1P49642 420 aaKnown RBP14.24□□□□□ -0.13
TMEM260-208ENST00000555905 POTEAQ6S8J7 498 aa14.24□□□□□ -0.13
TMEM260-208ENST00000555905 KRT27Q7Z3Y8 459 aa14.24□□□□□ -0.13
TMEM260-208ENST00000555905 TTC5Q8N0Z6 440 aa14.24□□□□□ -0.13
TMEM260-208ENST00000555905 RCAN3Q9UKA8 241 aa14.24□□□□□ -0.13
TMEM260-208ENST00000555905 ZNF790Q6PG37 636 aa14.23□□□□□ -0.13
TMEM260-208ENST00000555905 BCL9O00512 1426 aa14.23□□□□□ -0.13
TMEM260-208ENST00000555905 EIF4A1P60842 406 aaKnown RBP14.22□□□□□ -0.13
TMEM260-208ENST00000555905 SLC39A6Q13433 755 aa14.22□□□□□ -0.13
TMEM260-208ENST00000555905 TWISTNBQ3B726 338 aaPredicted RBP14.22□□□□□ -0.13
TMEM260-208ENST00000555905 C8orf58Q8NAV2 365 aa14.22□□□□□ -0.13
TMEM260-208ENST00000555905 PIGBQ92521 554 aa14.22□□□□□ -0.13
TMEM260-208ENST00000555905 ZNF428Q96B54 188 aa14.22□□□□□ -0.13
TMEM260-208ENST00000555905 ACSBG1Q96GR2 724 aa14.22□□□□□ -0.13
TMEM260-208ENST00000555905 PAPPAQ13219 1627 aa14.22□□□□□ -0.13
TMEM260-208ENST00000555905 SOS1Q07889 1333 aaPredicted RBP14.21□□□□□ -0.13
TMEM260-208ENST00000555905 ELL2O00472 640 aaPredicted RBP14.21□□□□□ -0.13
TMEM260-208ENST00000555905 KCNQ3O43525 872 aa14.21□□□□□ -0.13
TMEM260-208ENST00000555905 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
TMEM260-208ENST00000555905 KRT24Q2M2I5 525 aa14.2□□□□□ -0.14
TMEM260-208ENST00000555905 FAM196AQ6ZSG2 479 aa14.2□□□□□ -0.14
TMEM260-208ENST00000555905 TSPYL6Q8N831 410 aa14.2□□□□□ -0.14
TMEM260-208ENST00000555905 FMNL2Q96PY5 1086 aa14.2□□□□□ -0.14
TMEM260-208ENST00000555905 CHMP4AQ9BY43 222 aa14.2□□□□□ -0.14
TMEM260-208ENST00000555905 RGS12O14924 1447 aa14.2□□□□□ -0.14
TMEM260-208ENST00000555905 SBF2Q86WG5 1849 aa14.2□□□□□ -0.14
TMEM260-208ENST00000555905 UBR2Q8IWV8 1755 aa14.19□□□□□ -0.14
TMEM260-208ENST00000555905 VAMP4O75379 141 aa14.19□□□□□ -0.14
TMEM260-208ENST00000555905 HOXB7P09629 217 aa14.19□□□□□ -0.14
TMEM260-208ENST00000555905 FAM182BQ5T319 152 aa14.19□□□□□ -0.14
TMEM260-208ENST00000555905 RARSP54136 660 aaKnown RBP14.18□□□□□ -0.14
TMEM260-208ENST00000555905 ZNF496Q96IT1 587 aaPredicted RBP14.18□□□□□ -0.14
TMEM260-208ENST00000555905 ATG3Q9NT62 314 aa14.18□□□□□ -0.14
TMEM260-208ENST00000555905 ASAP1Q9ULH1 1129 aa14.18□□□□□ -0.14
TMEM260-208ENST00000555905 KCNQ2O43526 872 aa14.17□□□□□ -0.14
TMEM260-208ENST00000555905 GIGYF1O75420 1035 aaPredicted RBP14.17□□□□□ -0.14
TMEM260-208ENST00000555905 SNRPA1P09661 255 aaKnown RBP14.17□□□□□ -0.14
TMEM260-208ENST00000555905 ALDH1L2Q3SY69 923 aa14.17□□□□□ -0.14
TMEM260-208ENST00000555905 SMARCC1Q92922 1105 aaPredicted RBP14.17□□□□□ -0.14
TMEM260-208ENST00000555905 SUPT16HQ9Y5B9 1047 aaKnown RBP14.17□□□□□ -0.14
TMEM260-208ENST00000555905 HEG1Q9ULI3 1381 aa14.17□□□□□ -0.14
TMEM260-208ENST00000555905 KCPQ6ZWJ8 1503 aa14.16□□□□□ -0.14
TMEM260-208ENST00000555905 BTAF1O14981 1849 aa14.16□□□□□ -0.14
TMEM260-208ENST00000555905 PTCD1O75127 700 aaKnown RBP14.16□□□□□ -0.14
TMEM260-208ENST00000555905 CCDC30Q5VVM6 783 aa14.16□□□□□ -0.14
TMEM260-208ENST00000555905 SMC4Q9NTJ3 1288 aa14.16□□□□□ -0.14
TMEM260-208ENST00000555905 HDGFL1Q5TGJ6 251 aa14.15□□□□□ -0.14
TMEM260-208ENST00000555905 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.15□□□□□ -0.14
TMEM260-208ENST00000555905 SSH1Q8WYL5 1049 aa14.15□□□□□ -0.14
TMEM260-208ENST00000555905 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
TMEM260-208ENST00000555905 STK31Q9BXU1 1019 aa14.15□□□□□ -0.14
TMEM260-208ENST00000555905 BCL11BQ9C0K0 894 aaPredicted RBP14.15□□□□□ -0.14
TMEM260-208ENST00000555905 ZBTB12Q9Y330 459 aaPredicted RBP14.15□□□□□ -0.14
TMEM260-208ENST00000555905 LAMB4A4D0S4 1761 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms