RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 CHL1O00533 1208 aa21.53■■□□□ 1.04
RCCD1-204ENST00000555737 HCLS1P14317 486 aaPredicted RBP21.53■■□□□ 1.04
RCCD1-204ENST00000555737 EIF2S2P20042 333 aaKnown RBP21.53■■□□□ 1.04
RCCD1-204ENST00000555737 CNPY2Q9Y2B0 182 aa21.53■■□□□ 1.04
RCCD1-204ENST00000555737 LMTK2Q8IWU2 1503 aa21.52■■□□□ 1.04
RCCD1-204ENST00000555737 C14orf37Q86TY3 774 aa21.52■■□□□ 1.03
RCCD1-204ENST00000555737 MTHFSDQ2M296 383 aaKnown RBP21.51■■□□□ 1.03
RCCD1-204ENST00000555737 NEURL4Q96JN8 1562 aa21.51■■□□□ 1.03
RCCD1-204ENST00000555737 MBD3O95983 291 aa21.5■■□□□ 1.03
RCCD1-204ENST00000555737 SPC24Q8NBT2 197 aa21.5■■□□□ 1.03
RCCD1-204ENST00000555737 SPG7Q9UQ90 795 aa21.5■■□□□ 1.03
RCCD1-204ENST00000555737 PDLIM2Q96JY6 352 aa21.5■■□□□ 1.03
RCCD1-204ENST00000555737 SIGLEC1Q9BZZ2 1709 aa21.5■■□□□ 1.03
RCCD1-204ENST00000555737 SURF6O75683 361 aaKnown RBP21.5■■□□□ 1.03
RCCD1-204ENST00000555737 CHMLP26374 656 aa21.5■■□□□ 1.03
RCCD1-204ENST00000555737 BRD1O95696 1058 aa21.48■■□□□ 1.03
RCCD1-204ENST00000555737 CWC27Q6UX04 472 aaKnown RBP21.48■■□□□ 1.03
RCCD1-204ENST00000555737 IBTKQ9P2D0 1353 aaPredicted RBP21.48■■□□□ 1.03
RCCD1-204ENST00000555737 OS9Q13438 667 aaPredicted RBP21.48■■□□□ 1.03
RCCD1-204ENST00000555737 ANXA1P04083 346 aa21.47■■□□□ 1.03
RCCD1-204ENST00000555737 AMPHP49418 695 aa21.47■■□□□ 1.03
RCCD1-204ENST00000555737 KIAA2012Q0VF49 1180 aa21.47■■□□□ 1.03
RCCD1-204ENST00000555737 SYAP1Q96A49 352 aaPredicted RBP21.47■■□□□ 1.03
RCCD1-204ENST00000555737 GIMAP6Q6P9H5 292 aa21.47■■□□□ 1.03
RCCD1-204ENST00000555737 HAP1P54257 671 aaPredicted RBP21.46■■□□□ 1.03
RCCD1-204ENST00000555737 FLIIQ13045 1269 aa21.46■■□□□ 1.03
RCCD1-204ENST00000555737 MAP2P11137 1827 aaKnown RBP21.46■■□□□ 1.03
RCCD1-204ENST00000555737 ZNF500O60304 480 aaPredicted RBP21.46■■□□□ 1.03
RCCD1-204ENST00000555737 ESF1Q9H501 851 aaKnown RBP21.46■■□□□ 1.03
RCCD1-204ENST00000555737 VPS37CA5D8V6 355 aaPredicted RBP21.46■■□□□ 1.03
RCCD1-204ENST00000555737 SRCIN1Q9C0H9 1055 aa21.46■■□□□ 1.03
RCCD1-204ENST00000555737 ARHGEF40Q8TER5 1519 aa21.45■■□□□ 1.02
RCCD1-204ENST00000555737 KNDC1Q76NI1 1749 aa21.45■■□□□ 1.02
RCCD1-204ENST00000555737 PTPRCP08575 1304 aa21.45■■□□□ 1.02
RCCD1-204ENST00000555737 ADCY5O95622 1261 aa21.45■■□□□ 1.02
RCCD1-204ENST00000555737 USHBP1Q8N6Y0 703 aa21.45■■□□□ 1.02
RCCD1-204ENST00000555737 PIK3C2BO00750 1634 aa21.45■■□□□ 1.02
RCCD1-204ENST00000555737 CCT4P50991 539 aaKnown RBP21.44■■□□□ 1.02
RCCD1-204ENST00000555737 FERMT3Q86UX7 667 aa21.44■■□□□ 1.02
RCCD1-204ENST00000555737 MAP3K19Q56UN5 1328 aa21.44■■□□□ 1.02
RCCD1-204ENST00000555737 METP08581 1390 aa21.43■■□□□ 1.02
RCCD1-204ENST00000555737 CSPP1Q1MSJ5 1256 aa21.43■■□□□ 1.02
RCCD1-204ENST00000555737 PHAXQ9H814 394 aaKnown RBP21.43■■□□□ 1.02
RCCD1-204ENST00000555737 ACEP12821 1306 aa21.43■■□□□ 1.02
RCCD1-204ENST00000555737 PRR36Q9H6K5 1346 aa21.43■■□□□ 1.02
RCCD1-204ENST00000555737 UBTFL1P0CB47 393 aaPredicted RBP21.43■■□□□ 1.02
RCCD1-204ENST00000555737 ZHX1Q9UKY1 873 aaPredicted RBP21.43■■□□□ 1.02
RCCD1-204ENST00000555737 MLH3Q9UHC1 1453 aa21.43■■□□□ 1.02
RCCD1-204ENST00000555737 RGS12O14924 1447 aa21.43■■□□□ 1.02
RCCD1-204ENST00000555737 CCDC83Q8IWF9 413 aa21.42■■□□□ 1.02
RCCD1-204ENST00000555737 SLC26A8Q96RN1 970 aa21.42■■□□□ 1.02
RCCD1-204ENST00000555737 HECW2Q9P2P5 1572 aa21.42■■□□□ 1.02
RCCD1-204ENST00000555737 FAM173BQ6P4H8 233 aa21.42■■□□□ 1.02
RCCD1-204ENST00000555737 SASS6Q6UVJ0 657 aa21.42■■□□□ 1.02
RCCD1-204ENST00000555737 TCEANC2Q96MN5 208 aa21.42■■□□□ 1.02
RCCD1-204ENST00000555737 CAMK4Q16566 473 aa21.41■■□□□ 1.02
RCCD1-204ENST00000555737 CYB5RLQ6IPT4 315 aa21.41■■□□□ 1.02
RCCD1-204ENST00000555737 HS1BP3Q53T59 392 aa21.41■■□□□ 1.02
RCCD1-204ENST00000555737 CPS1P31327 1500 aa21.41■■□□□ 1.02
RCCD1-204ENST00000555737 RASEFQ8IZ41 740 aa21.4■■□□□ 1.02
RCCD1-204ENST00000555737 SMC3Q9UQE7 1217 aa21.4■■□□□ 1.02
RCCD1-204ENST00000555737 MYO5BQ9ULV0 1848 aa21.4■■□□□ 1.02
RCCD1-204ENST00000555737 EDC4Q6P2E9 1401 aaKnown RBP21.4■■□□□ 1.02
RCCD1-204ENST00000555737 SRGAP3O43295 1099 aa21.4■■□□□ 1.02
RCCD1-204ENST00000555737 KCNJ4P48050 445 aa21.4■■□□□ 1.02
RCCD1-204ENST00000555737 WDR33Q9C0J8 1336 aaKnown RBP21.4■■□□□ 1.02
RCCD1-204ENST00000555737 CASTP20810 708 aaKnown RBP21.4■■□□□ 1.02
RCCD1-204ENST00000555737 AK2P54819 239 aa21.4■■□□□ 1.02
RCCD1-204ENST00000555737 CBX1P83916 185 aa21.4■■□□□ 1.02
RCCD1-204ENST00000555737 TTC21BQ7Z4L5 1316 aa21.39■■□□□ 1.02
RCCD1-204ENST00000555737 NECAB1Q8N987 351 aa21.39■■□□□ 1.02
RCCD1-204ENST00000555737 PPP1R42Q7Z4L9 355 aa21.39■■□□□ 1.01
RCCD1-204ENST00000555737 NGDNQ8NEJ9 315 aaKnown RBP21.39■■□□□ 1.01
RCCD1-204ENST00000555737 GNAI3P08754 354 aa21.38■■□□□ 1.01
RCCD1-204ENST00000555737 MCM2P49736 904 aa21.38■■□□□ 1.01
RCCD1-204ENST00000555737 DNM1Q05193 864 aaKnown RBP21.38■■□□□ 1.01
RCCD1-204ENST00000555737 ALKQ9UM73 1620 aa21.38■■□□□ 1.01
RCCD1-204ENST00000555737 PHF14O94880 888 aa21.38■■□□□ 1.01
RCCD1-204ENST00000555737 LARGE1O95461 756 aa21.38■■□□□ 1.01
RCCD1-204ENST00000555737 SYT1P21579 422 aa21.37■■□□□ 1.01
RCCD1-204ENST00000555737 ATP8B2P98198 1209 aa21.37■■□□□ 1.01
RCCD1-204ENST00000555737 NOLC1Q14978 699 aaKnown RBP eCLIP21.37■■□□□ 1.015e-8■□□□□ 10.4
RCCD1-204ENST00000555737 OSCARQ8IYS5 282 aa21.37■■□□□ 1.01
RCCD1-204ENST00000555737 SPDYE4A6NLX3 237 aa21.36■■□□□ 1.01
RCCD1-204ENST00000555737 IGSF3O75054 1194 aa21.36■■□□□ 1.01
RCCD1-204ENST00000555737 CUL4AQ13619 759 aa21.36■■□□□ 1.01
RCCD1-204ENST00000555737 HDGFL1Q5TGJ6 251 aa21.36■■□□□ 1.01
RCCD1-204ENST00000555737 A0A0U1RQG5 324 aaPredicted RBP21.36■■□□□ 1.01
RCCD1-204ENST00000555737 CCDC30Q5VVM6 783 aa21.36■■□□□ 1.01
RCCD1-204ENST00000555737 EYA1Q99502 592 aa21.36■■□□□ 1.01
RCCD1-204ENST00000555737 STX6O43752 255 aa21.35■■□□□ 1.01
RCCD1-204ENST00000555737 PRPF40BQ6NWY9 871 aaKnown RBP21.35■■□□□ 1.01
RCCD1-204ENST00000555737 JAKMIP1Q96N16 626 aaKnown RBP21.35■■□□□ 1.01
RCCD1-204ENST00000555737 USP44Q9H0E7 712 aa21.35■■□□□ 1.01
RCCD1-204ENST00000555737 OSBPL3Q9H4L5 887 aa21.34■■□□□ 1.01
RCCD1-204ENST00000555737 DYNC1I1O14576 645 aa21.34■■□□□ 1.01
RCCD1-204ENST00000555737 NBPF7P0C2Y1 421 aaPredicted RBP21.34■■□□□ 1.01
RCCD1-204ENST00000555737 FOSBP53539 338 aa21.34■■□□□ 1.01
RCCD1-204ENST00000555737 DRC7Q8IY82 874 aa21.34■■□□□ 1.01
RCCD1-204ENST00000555737 SNX14Q9Y5W7 946 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms