RNA–Protein interactions for RNA: ENST00000555677.5

IFT43-211, Transcript of intraflagellar transport 43, humanhuman

TSL 4

Gene IFT43, Length 487 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-211ENST00000555677 SGIP1Q9BQI5 828 aa20.27■□□□□ 0.84
IFT43-211ENST00000555677 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
IFT43-211ENST00000555677 SLC16A10Q8TF71 515 aa20.26■□□□□ 0.83
IFT43-211ENST00000555677 LGR6Q9HBX8 967 aa20.26■□□□□ 0.83
IFT43-211ENST00000555677 ATP6V1AP38606 617 aa20.25■□□□□ 0.83
IFT43-211ENST00000555677 COL23A1Q86Y22 540 aaPredicted RBP20.25■□□□□ 0.83
IFT43-211ENST00000555677 ITPK1Q13572 414 aa20.24■□□□□ 0.83
IFT43-211ENST00000555677 ADAMTS7Q9UKP4 1686 aa20.23■□□□□ 0.83
IFT43-211ENST00000555677 DDX10Q13206 875 aaKnown RBP20.23■□□□□ 0.83
IFT43-211ENST00000555677 LINC00116Q8NCU8 138 aa20.23■□□□□ 0.83
IFT43-211ENST00000555677 RNMTO43148 476 aaKnown RBP20.22■□□□□ 0.83
IFT43-211ENST00000555677 MSH5O43196 834 aa20.22■□□□□ 0.83
IFT43-211ENST00000555677 SLC4A9Q96Q91 983 aa20.22■□□□□ 0.83
IFT43-211ENST00000555677 RBM42Q9BTD8 480 aaKnown RBP20.22■□□□□ 0.83
IFT43-211ENST00000555677 NUDCQ9Y266 331 aa20.22■□□□□ 0.83
IFT43-211ENST00000555677 COL5A3P25940 1745 aaPredicted RBP20.22■□□□□ 0.83
IFT43-211ENST00000555677 AMIGO3Q86WK7 504 aa20.21■□□□□ 0.83
IFT43-211ENST00000555677 AK7Q96M32 723 aa20.21■□□□□ 0.83
IFT43-211ENST00000555677 SMIM5Q71RC9 77 aa20.2■□□□□ 0.82
IFT43-211ENST00000555677 RSPH6AQ9H0K4 717 aa20.2■□□□□ 0.82
IFT43-211ENST00000555677 SLC52A2Q9HAB3 445 aa20.2■□□□□ 0.82
IFT43-211ENST00000555677 FLAD1Q8NFF5 587 aa20.19■□□□□ 0.82
IFT43-211ENST00000555677 PHACTR3Q96KR7 559 aa20.19■□□□□ 0.82
IFT43-211ENST00000555677 ARXQ96QS3 562 aa20.19■□□□□ 0.82
IFT43-211ENST00000555677 MYH14Q7Z406 1995 aaKnown RBP20.18■□□□□ 0.82
IFT43-211ENST00000555677 U2AF1L5P0DN76 240 aaPredicted RBP20.18■□□□□ 0.82
IFT43-211ENST00000555677 PRKAR2BP31323 418 aa20.18■□□□□ 0.82
IFT43-211ENST00000555677 U2AF1Q01081 240 aaKnown RBP eCLIP20.18■□□□□ 0.82
IFT43-211ENST00000555677 PTCD1O75127 700 aaKnown RBP20.17■□□□□ 0.82
IFT43-211ENST00000555677 FHDC1Q9C0D6 1143 aaPredicted RBP20.17■□□□□ 0.82
IFT43-211ENST00000555677 MRC1P22897 1456 aa20.17■□□□□ 0.82
IFT43-211ENST00000555677 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.16■□□□□ 0.82
IFT43-211ENST00000555677 GNAT3A8MTJ3 354 aa20.16■□□□□ 0.82
IFT43-211ENST00000555677 FCHSD2O94868 740 aa20.16■□□□□ 0.82
IFT43-211ENST00000555677 PHF14O94880 888 aa20.16■□□□□ 0.82
IFT43-211ENST00000555677 ZEB1P37275 1124 aaPredicted RBP20.16■□□□□ 0.82
IFT43-211ENST00000555677 GAS2L2Q8NHY3 880 aa20.16■□□□□ 0.82
IFT43-211ENST00000555677 SYT17Q9BSW7 474 aa20.16■□□□□ 0.82
IFT43-211ENST00000555677 TJP1Q07157 1748 aa20.16■□□□□ 0.82
IFT43-211ENST00000555677 SIPA1L3O60292 1781 aaPredicted RBP20.16■□□□□ 0.82
IFT43-211ENST00000555677 POLD1P28340 1107 aa20.15■□□□□ 0.82
IFT43-211ENST00000555677 IL17REQ8NFR9 667 aa20.15■□□□□ 0.82
IFT43-211ENST00000555677 MAP3K5Q99683 1374 aa20.14■□□□□ 0.81
IFT43-211ENST00000555677 GNPATO15228 680 aa20.14■□□□□ 0.81
IFT43-211ENST00000555677 SSFA2P28290 1259 aa20.14■□□□□ 0.81
IFT43-211ENST00000555677 SLC39A6Q13433 755 aa20.14■□□□□ 0.81
IFT43-211ENST00000555677 RALBP1Q15311 655 aa20.14■□□□□ 0.81
IFT43-211ENST00000555677 RC3H1Q5TC82 1133 aaKnown RBP20.14■□□□□ 0.81
IFT43-211ENST00000555677 CICQ96RK0 1608 aaPredicted RBP20.13■□□□□ 0.81
IFT43-211ENST00000555677 MSL1Q68DK7 614 aa20.13■□□□□ 0.81
IFT43-211ENST00000555677 DLG5Q8TDM6 1919 aa20.13■□□□□ 0.81
IFT43-211ENST00000555677 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
IFT43-211ENST00000555677 CNTNAP4Q9C0A0 1308 aa20.1■□□□□ 0.81
IFT43-211ENST00000555677 RTCBQ9Y3I0 505 aaKnown RBP20.1■□□□□ 0.81
IFT43-211ENST00000555677 KCPQ6ZWJ8 1503 aa20.09■□□□□ 0.81
IFT43-211ENST00000555677 RPS6KA4O75676 772 aa20.09■□□□□ 0.81
IFT43-211ENST00000555677 TRAPPC3LQ5T215 181 aa20.09■□□□□ 0.81
IFT43-211ENST00000555677 CRKLP46109 303 aaKnown RBP20.08■□□□□ 0.81
IFT43-211ENST00000555677 TEFQ10587 303 aa20.08■□□□□ 0.81
IFT43-211ENST00000555677 CEMIPQ8WUJ3 1361 aa20.08■□□□□ 0.8
IFT43-211ENST00000555677 C4AP0C0L4 1744 aa20.07■□□□□ 0.8
IFT43-211ENST00000555677 DNAJC10Q8IXB1 793 aa20.07■□□□□ 0.8
IFT43-211ENST00000555677 KLHL34Q8N239 644 aa20.07■□□□□ 0.8
IFT43-211ENST00000555677 ARHGEF1Q92888 912 aaKnown RBP20.07■□□□□ 0.8
IFT43-211ENST00000555677 DCAF8L1A6NGE4 600 aa20.06■□□□□ 0.8
IFT43-211ENST00000555677 INTS5Q6P9B9 1019 aaKnown RBP20.06■□□□□ 0.8
IFT43-211ENST00000555677 PLEKHF1Q96S99 279 aa20.06■□□□□ 0.8
IFT43-211ENST00000555677 ADRA2BP18089 450 aa20.05■□□□□ 0.8
IFT43-211ENST00000555677 MYBBP1AQ9BQG0 1328 aaKnown RBP20.04■□□□□ 0.8
IFT43-211ENST00000555677 CYP19A1P11511 503 aaPredicted RBP20.04■□□□□ 0.8
IFT43-211ENST00000555677 ZNF790Q6PG37 636 aa20.04■□□□□ 0.8
IFT43-211ENST00000555677 MCM10Q7L590 875 aa20.04■□□□□ 0.8
IFT43-211ENST00000555677 TTC5Q8N0Z6 440 aa20.04■□□□□ 0.8
IFT43-211ENST00000555677 VSIG10Q8N0Z9 540 aa20.04■□□□□ 0.8
IFT43-211ENST00000555677 RFC4P35249 363 aa20.03■□□□□ 0.8
IFT43-211ENST00000555677 DCTN1Q14203 1278 aa20.03■□□□□ 0.8
IFT43-211ENST00000555677 RTF1Q92541 710 aaKnown RBP20.03■□□□□ 0.8
IFT43-211ENST00000555677 HTATSF1O43719 755 aaKnown RBP20.02■□□□□ 0.8
IFT43-211ENST00000555677 NEFMP07197 916 aa20.02■□□□□ 0.8
IFT43-211ENST00000555677 NLGN2Q8NFZ4 835 aa20.02■□□□□ 0.8
IFT43-211ENST00000555677 ZNF496Q96IT1 587 aaPredicted RBP20.02■□□□□ 0.8
IFT43-211ENST00000555677 BTBD11A6QL63 1104 aa20.01■□□□□ 0.79
IFT43-211ENST00000555677 PNNQ9H307 717 aaKnown RBP20.01■□□□□ 0.79
IFT43-211ENST00000555677 CCDC87Q9NVE4 849 aa20.01■□□□□ 0.79
IFT43-211ENST00000555677 KCNQ3O43525 872 aa20■□□□□ 0.79
IFT43-211ENST00000555677 GYS1P13807 737 aa20■□□□□ 0.79
IFT43-211ENST00000555677 PRKRIP1Q9H875 184 aaPredicted RBP20■□□□□ 0.79
IFT43-211ENST00000555677 HEG1Q9ULI3 1381 aa19.99■□□□□ 0.79
IFT43-211ENST00000555677 NLGN1Q8N2Q7 840 aa19.99■□□□□ 0.79
IFT43-211ENST00000555677 CD2APQ9Y5K6 639 aa19.99■□□□□ 0.79
IFT43-211ENST00000555677 CHD4Q14839 1912 aa19.98■□□□□ 0.79
IFT43-211ENST00000555677 MMP10P09238 476 aa19.97■□□□□ 0.79
IFT43-211ENST00000555677 NFE2L2Q16236 605 aa19.97■□□□□ 0.79
IFT43-211ENST00000555677 FMNL2Q96PY5 1086 aa19.97■□□□□ 0.79
IFT43-211ENST00000555677 TEX13AQ9BXU3 409 aaPredicted RBP19.97■□□□□ 0.79
IFT43-211ENST00000555677 SRP68Q9UHB9 627 aaKnown RBP19.97■□□□□ 0.79
IFT43-211ENST00000555677 ZBTB1Q9Y2K1 713 aa19.97■□□□□ 0.79
IFT43-211ENST00000555677 SOS1Q07889 1333 aaPredicted RBP19.97■□□□□ 0.79
IFT43-211ENST00000555677 KIF13BQ9NQT8 1826 aa19.97■□□□□ 0.79
IFT43-211ENST00000555677 STARD3NLO95772 234 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 530.6 ms