RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SMARCA5O60264 1052 aaPredicted RBP19.83■□□□□ 0.76
TUBB3-209ENST00000555609 AMPHP49418 695 aa19.83■□□□□ 0.76
TUBB3-209ENST00000555609 ATP8B2P98198 1209 aa19.82■□□□□ 0.76
TUBB3-209ENST00000555609 IL17RAQ96F46 866 aa19.82■□□□□ 0.76
TUBB3-209ENST00000555609 EYA1Q99502 592 aa19.82■□□□□ 0.76
TUBB3-209ENST00000555609 CHMP4AQ9BY43 222 aa19.82■□□□□ 0.76
TUBB3-209ENST00000555609 AMOTL2Q9Y2J4 779 aa19.82■□□□□ 0.76
TUBB3-209ENST00000555609 AOX1Q06278 1338 aa19.82■□□□□ 0.76
TUBB3-209ENST00000555609 SALL3Q9BXA9 1300 aa19.82■□□□□ 0.76
TUBB3-209ENST00000555609 ANAPC15P60006 121 aa19.82■□□□□ 0.76
TUBB3-209ENST00000555609 DDX49Q9Y6V7 483 aaKnown RBP19.82■□□□□ 0.76
TUBB3-209ENST00000555609 USP54Q70EL1 1684 aa19.81■□□□□ 0.76
TUBB3-209ENST00000555609 GNAT3A8MTJ3 354 aa19.81■□□□□ 0.76
TUBB3-209ENST00000555609 MCCP23508 829 aa19.81■□□□□ 0.76
TUBB3-209ENST00000555609 ZNF445P59923 1031 aa19.81■□□□□ 0.76
TUBB3-209ENST00000555609 G2E3Q7L622 706 aa19.81■□□□□ 0.76
TUBB3-209ENST00000555609 NGDNQ8NEJ9 315 aaKnown RBP19.81■□□□□ 0.76
TUBB3-209ENST00000555609 LRRCC1Q9C099 1032 aa19.81■□□□□ 0.76
TUBB3-209ENST00000555609 CACNA1FO60840 1977 aa19.81■□□□□ 0.76
TUBB3-209ENST00000555609 CCDC173Q0VFZ6 552 aa19.8■□□□□ 0.76
TUBB3-209ENST00000555609 SLC4A10Q6U841 1118 aa19.8■□□□□ 0.76
TUBB3-209ENST00000555609 GAS2L3Q86XJ1 694 aa19.8■□□□□ 0.76
TUBB3-209ENST00000555609 ARXQ96QS3 562 aa19.8■□□□□ 0.76
TUBB3-209ENST00000555609 STAP2Q9UGK3 403 aa19.8■□□□□ 0.76
TUBB3-209ENST00000555609 FLIIQ13045 1269 aa19.79■□□□□ 0.76
TUBB3-209ENST00000555609 TRIM44Q96DX7 344 aaPredicted RBP19.79■□□□□ 0.76
TUBB3-209ENST00000555609 FOXO3O43524 673 aa19.79■□□□□ 0.76
TUBB3-209ENST00000555609 ANP32BQ92688 251 aaKnown RBP19.79■□□□□ 0.76
TUBB3-209ENST00000555609 N4BP2Q86UW6 1770 aaPredicted RBP19.78■□□□□ 0.76
TUBB3-209ENST00000555609 PPP1R9BQ96SB3 815 aa19.78■□□□□ 0.76
TUBB3-209ENST00000555609 MIS18AQ9NYP9 233 aa19.78■□□□□ 0.76
TUBB3-209ENST00000555609 ESPNB1AK53 854 aa19.77■□□□□ 0.76
TUBB3-209ENST00000555609 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.77■□□□□ 0.76
TUBB3-209ENST00000555609 F6X3S4 739 aa19.77■□□□□ 0.76
TUBB3-209ENST00000555609 ESYT1Q9BSJ8 1104 aa19.77■□□□□ 0.76
TUBB3-209ENST00000555609 LMBRD1Q9NUN5 540 aa19.77■□□□□ 0.76
TUBB3-209ENST00000555609 PIK3C2AO00443 1686 aa19.76■□□□□ 0.75
TUBB3-209ENST00000555609 MAP3K5Q99683 1374 aa19.76■□□□□ 0.75
TUBB3-209ENST00000555609 NUTM2FA1L443 756 aa19.76■□□□□ 0.75
TUBB3-209ENST00000555609 MX1P20591 662 aa19.76■□□□□ 0.75
TUBB3-209ENST00000555609 TAF7Q15545 349 aaPredicted RBP19.76■□□□□ 0.75
TUBB3-209ENST00000555609 XRN1Q8IZH2 1706 aaKnown RBP19.76■□□□□ 0.75
TUBB3-209ENST00000555609 FAM208AQ9UK61 1670 aaKnown RBP19.76■□□□□ 0.75
TUBB3-209ENST00000555609 APBB1O00213 710 aa19.75■□□□□ 0.75
TUBB3-209ENST00000555609 RAB11FIP3O75154 756 aa19.75■□□□□ 0.75
TUBB3-209ENST00000555609 SLC26A8Q96RN1 970 aa19.75■□□□□ 0.75
TUBB3-209ENST00000555609 FKBP5Q13451 457 aaPredicted RBP19.75■□□□□ 0.75
TUBB3-209ENST00000555609 MCTP1Q6DN14 999 aa19.75■□□□□ 0.75
TUBB3-209ENST00000555609 INTS4Q96HW7 963 aaKnown RBP19.75■□□□□ 0.75
TUBB3-209ENST00000555609 HOXC9P31274 260 aa19.74■□□□□ 0.75
TUBB3-209ENST00000555609 NASPP49321 788 aaPredicted RBP19.74■□□□□ 0.75
TUBB3-209ENST00000555609 THEMISQ8N1K5 641 aaPredicted RBP19.74■□□□□ 0.75
TUBB3-209ENST00000555609 STRCQ7RTU9 1775 aa19.74■□□□□ 0.75
TUBB3-209ENST00000555609 CUL4AQ13619 759 aa19.73■□□□□ 0.75
TUBB3-209ENST00000555609 HOXB7P09629 217 aa19.73■□□□□ 0.75
TUBB3-209ENST00000555609 NLRP6P59044 892 aa19.73■□□□□ 0.75
TUBB3-209ENST00000555609 TUBGCP6Q96RT7 1819 aa19.72■□□□□ 0.75
TUBB3-209ENST00000555609 NWD1Q149M9 1564 aa19.72■□□□□ 0.75
TUBB3-209ENST00000555609 SOX12O15370 315 aa19.72■□□□□ 0.75
TUBB3-209ENST00000555609 CHMLP26374 656 aa19.72■□□□□ 0.75
TUBB3-209ENST00000555609 EXOC6BQ9Y2D4 811 aa19.72■□□□□ 0.75
TUBB3-209ENST00000555609 HS1BP3Q53T59 392 aa19.71■□□□□ 0.75
TUBB3-209ENST00000555609 SSH3Q8TE77 659 aa19.71■□□□□ 0.75
TUBB3-209ENST00000555609 NEK4P51957 841 aa19.7■□□□□ 0.74
TUBB3-209ENST00000555609 IL17REQ8NFR9 667 aa19.7■□□□□ 0.74
TUBB3-209ENST00000555609 MBD3O95983 291 aa19.69■□□□□ 0.74
TUBB3-209ENST00000555609 UBTFL1P0CB47 393 aaPredicted RBP19.69■□□□□ 0.74
TUBB3-209ENST00000555609 TMX3Q96JJ7 454 aa19.69■□□□□ 0.74
TUBB3-209ENST00000555609 ZDHHC9Q9Y397 364 aa19.69■□□□□ 0.74
TUBB3-209ENST00000555609 PNMA6EA0A0J9YXQ4 647 aa19.69■□□□□ 0.74
TUBB3-209ENST00000555609 ZSCAN23Q3MJ62 389 aa19.69■□□□□ 0.74
TUBB3-209ENST00000555609 ZGPATQ8N5A5 531 aaKnown RBP19.69■□□□□ 0.74
TUBB3-209ENST00000555609 USP44Q9H0E7 712 aa19.69■□□□□ 0.74
TUBB3-209ENST00000555609 LRRFIP2Q9Y608 721 aaKnown RBP19.68■□□□□ 0.74
TUBB3-209ENST00000555609 POLA2Q14181 598 aa19.67■□□□□ 0.74
TUBB3-209ENST00000555609 CEMIPQ8WUJ3 1361 aa19.67■□□□□ 0.74
TUBB3-209ENST00000555609 BRD1O95696 1058 aa19.67■□□□□ 0.74
TUBB3-209ENST00000555609 HSP90AB4PQ58FF6 505 aa19.67■□□□□ 0.74
TUBB3-209ENST00000555609 CAVIN1Q6NZI2 390 aaKnown RBP19.67■□□□□ 0.74
TUBB3-209ENST00000555609 MARF1Q9Y4F3 1742 aaKnown RBP19.66■□□□□ 0.74
TUBB3-209ENST00000555609 TRIM6-TRIM34B2RNG4 842 aa19.66■□□□□ 0.74
TUBB3-209ENST00000555609 RGPD8O14715 1765 aaPredicted RBP19.66■□□□□ 0.74
TUBB3-209ENST00000555609 PRPF40AO75400 957 aaKnown RBP19.65■□□□□ 0.74
TUBB3-209ENST00000555609 PKP1Q13835 747 aa19.65■□□□□ 0.74
TUBB3-209ENST00000555609 HDGFL1Q5TGJ6 251 aa19.65■□□□□ 0.74
TUBB3-209ENST00000555609 ADGRL3Q9HAR2 1447 aa19.65■□□□□ 0.74
TUBB3-209ENST00000555609 NCLP19338 710 aaKnown RBP19.65■□□□□ 0.74
TUBB3-209ENST00000555609 RILPL2Q969X0 211 aa19.65■□□□□ 0.74
TUBB3-209ENST00000555609 ZSCAN30Q86W11 494 aa19.64■□□□□ 0.73
TUBB3-209ENST00000555609 ANO2Q9NQ90 1003 aa19.64■□□□□ 0.73
TUBB3-209ENST00000555609 MED1Q15648 1581 aaPredicted RBP19.64■□□□□ 0.73
TUBB3-209ENST00000555609 ANKLE2Q86XL3 938 aa19.63■□□□□ 0.73
TUBB3-209ENST00000555609 ABTB2Q8N961 1025 aa19.63■□□□□ 0.73
TUBB3-209ENST00000555609 IP6K1Q92551 441 aa19.63■□□□□ 0.73
TUBB3-209ENST00000555609 KIF1BPQ96EK5 621 aa19.63■□□□□ 0.73
TUBB3-209ENST00000555609 HDAC5Q9UQL6 1122 aa19.63■□□□□ 0.73
TUBB3-209ENST00000555609 PLEKHG5O94827 1062 aa19.62■□□□□ 0.73
TUBB3-209ENST00000555609 HSPA4P34932 840 aa19.62■□□□□ 0.73
TUBB3-209ENST00000555609 LRSAM1Q6UWE0 723 aa19.62■□□□□ 0.73
TUBB3-209ENST00000555609 KLHL34Q8N239 644 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms