RNA–Protein interactions for RNA: ENST00000555578.1

LINC00638-201, long intergenic non-protein coding RNA 638, humanhuman

BASIC

Gene LINC00638, Length 2,518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00638-201ENST00000555578 EIF4A1P60842 406 aaKnown RBP17.61■□□□□ 0.41
LINC00638-201ENST00000555578 PRAMEF22A3QJZ6 481 aa17.61■□□□□ 0.41
LINC00638-201ENST00000555578 HDGFL1Q5TGJ6 251 aa17.61■□□□□ 0.41
LINC00638-201ENST00000555578 CRYBG1Q9Y4K1 1723 aa17.61■□□□□ 0.41
LINC00638-201ENST00000555578 HDAC1Q13547 482 aaPredicted RBP17.6■□□□□ 0.41
LINC00638-201ENST00000555578 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
LINC00638-201ENST00000555578 SIRT2Q8IXJ6 389 aa17.6■□□□□ 0.41
LINC00638-201ENST00000555578 SLC39A6Q13433 755 aa17.6■□□□□ 0.41
LINC00638-201ENST00000555578 FKBP5Q13451 457 aaPredicted RBP17.6■□□□□ 0.41
LINC00638-201ENST00000555578 TOM1L2Q6ZVM7 507 aa17.6■□□□□ 0.41
LINC00638-201ENST00000555578 PHAXQ9H814 394 aaKnown RBP17.6■□□□□ 0.41
LINC00638-201ENST00000555578 FLIIQ13045 1269 aa17.59■□□□□ 0.41
LINC00638-201ENST00000555578 USP35Q9P2H5 1018 aa17.59■□□□□ 0.41
LINC00638-201ENST00000555578 C8orf34Q49A92 452 aa17.59■□□□□ 0.41
LINC00638-201ENST00000555578 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
LINC00638-201ENST00000555578 MEIS3Q99687 375 aa17.59■□□□□ 0.41
LINC00638-201ENST00000555578 CPDO75976 1380 aa17.59■□□□□ 0.41
LINC00638-201ENST00000555578 CAMTA1Q9Y6Y1 1673 aa17.58■□□□□ 0.41
LINC00638-201ENST00000555578 PTPRCP08575 1304 aa17.58■□□□□ 0.4
LINC00638-201ENST00000555578 CYP27B1O15528 508 aa17.58■□□□□ 0.4
LINC00638-201ENST00000555578 NFATC2IPQ8NCF5 419 aa17.58■□□□□ 0.4
LINC00638-201ENST00000555578 LMO7Q8WWI1 1683 aa17.58■□□□□ 0.4
LINC00638-201ENST00000555578 PHKG2P15735 406 aa17.57■□□□□ 0.4
LINC00638-201ENST00000555578 RTN4Q9NQC3 1192 aaKnown RBP17.57■□□□□ 0.4
LINC00638-201ENST00000555578 VIRMAQ69YN4 1812 aaKnown RBP17.57■□□□□ 0.4
LINC00638-201ENST00000555578 BABAM1Q9NWV8 329 aa17.57■□□□□ 0.4
LINC00638-201ENST00000555578 LARP1Q6PKG0 1096 aaKnown RBP17.56■□□□□ 0.4
LINC00638-201ENST00000555578 CHPF2Q9P2E5 772 aa17.56■□□□□ 0.4
LINC00638-201ENST00000555578 SPG7Q9UQ90 795 aa17.56■□□□□ 0.4
LINC00638-201ENST00000555578 FAM208AQ9UK61 1670 aaKnown RBP17.56■□□□□ 0.4
LINC00638-201ENST00000555578 FAM161AQ3B820 660 aa17.56■□□□□ 0.4
LINC00638-201ENST00000555578 SMC5Q8IY18 1101 aa17.56■□□□□ 0.4
LINC00638-201ENST00000555578 LNPKQ9C0E8 428 aa17.56■□□□□ 0.4
LINC00638-201ENST00000555578 EVA1CP58658 441 aa17.54■□□□□ 0.4
LINC00638-201ENST00000555578 WDR17Q8IZU2 1322 aa17.54■□□□□ 0.4
LINC00638-201ENST00000555578 KDM6AO15550 1401 aaPredicted RBP17.54■□□□□ 0.4
LINC00638-201ENST00000555578 IFNL2Q8IZJ0 200 aa17.54■□□□□ 0.4
LINC00638-201ENST00000555578 ANKRD45Q5TZF3 282 aa17.53■□□□□ 0.4
LINC00638-201ENST00000555578 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.53■□□□□ 0.4
LINC00638-201ENST00000555578 PROSER3Q2NL68 480 aa17.52■□□□□ 0.4
LINC00638-201ENST00000555578 CHMP4BQ9H444 224 aaKnown RBP17.52■□□□□ 0.4
LINC00638-201ENST00000555578 GIGYF1O75420 1035 aaPredicted RBP17.52■□□□□ 0.39
LINC00638-201ENST00000555578 SLC52A2Q9HAB3 445 aa17.52■□□□□ 0.39
LINC00638-201ENST00000555578 SEC24BO95487 1268 aa17.51■□□□□ 0.39
LINC00638-201ENST00000555578 COL5A2P05997 1499 aaPredicted RBP17.51■□□□□ 0.39
LINC00638-201ENST00000555578 KDM3BQ7LBC6 1761 aa17.51■□□□□ 0.39
LINC00638-201ENST00000555578 DDX54Q8TDD1 881 aaKnown RBP17.51■□□□□ 0.39
LINC00638-201ENST00000555578 APBB1O00213 710 aa17.51■□□□□ 0.39
LINC00638-201ENST00000555578 BTG4Q9NY30 223 aa17.51■□□□□ 0.39
LINC00638-201ENST00000555578 PIP4K2BP78356 416 aa17.5■□□□□ 0.39
LINC00638-201ENST00000555578 ZNF790Q6PG37 636 aa17.5■□□□□ 0.39
LINC00638-201ENST00000555578 NHSL1Q5SYE7 1610 aa17.5■□□□□ 0.39
LINC00638-201ENST00000555578 NUCB1Q02818 461 aa17.5■□□□□ 0.39
LINC00638-201ENST00000555578 RTL5Q5HYW3 569 aaPredicted RBP17.5■□□□□ 0.39
LINC00638-201ENST00000555578 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.5■□□□□ 0.39
LINC00638-201ENST00000555578 PIP4K2AP48426 406 aaPredicted RBP17.49■□□□□ 0.39
LINC00638-201ENST00000555578 CCT4P50991 539 aaKnown RBP17.49■□□□□ 0.39
LINC00638-201ENST00000555578 CEP85Q6P2H3 762 aa17.49■□□□□ 0.39
LINC00638-201ENST00000555578 CHD1LQ86WJ1 897 aa17.49■□□□□ 0.39
LINC00638-201ENST00000555578 ROBO1Q9Y6N7 1651 aa17.48■□□□□ 0.39
LINC00638-201ENST00000555578 PI4KAP2A4QPH2 592 aa17.48■□□□□ 0.39
LINC00638-201ENST00000555578 PI4KAP1Q8N8J0 262 aa17.48■□□□□ 0.39
LINC00638-201ENST00000555578 ZCRB1Q8TBF4 217 aaKnown RBP17.48■□□□□ 0.39
LINC00638-201ENST00000555578 ABCA3Q99758 1704 aa17.48■□□□□ 0.39
LINC00638-201ENST00000555578 ZNF496Q96IT1 587 aaPredicted RBP17.48■□□□□ 0.39
LINC00638-201ENST00000555578 DCAF5Q96JK2 942 aa17.48■□□□□ 0.39
LINC00638-201ENST00000555578 ATP10DQ9P241 1426 aa17.47■□□□□ 0.39
LINC00638-201ENST00000555578 CABP4P57796 275 aa17.47■□□□□ 0.39
LINC00638-201ENST00000555578 ANKRD44Q8N8A2 993 aa17.47■□□□□ 0.39
LINC00638-201ENST00000555578 SOS1Q07889 1333 aaPredicted RBP17.46■□□□□ 0.39
LINC00638-201ENST00000555578 IL2RBP14784 551 aa17.46■□□□□ 0.39
LINC00638-201ENST00000555578 AIMP1Q12904 312 aaKnown RBP17.46■□□□□ 0.39
LINC00638-201ENST00000555578 CARD10Q9BWT7 1032 aa17.46■□□□□ 0.39
LINC00638-201ENST00000555578 ADAMTS2O95450 1211 aa17.46■□□□□ 0.38
LINC00638-201ENST00000555578 SCN11AQ9UI33 1791 aa17.45■□□□□ 0.38
LINC00638-201ENST00000555578 OVOS2A0A0G2JMS6 1433 aa17.45■□□□□ 0.38
LINC00638-201ENST00000555578 HOXB7P09629 217 aa17.45■□□□□ 0.38
LINC00638-201ENST00000555578 GCC1Q96CN9 775 aa17.45■□□□□ 0.38
LINC00638-201ENST00000555578 LTBP4Q8N2S1 1624 aa17.45■□□□□ 0.38
LINC00638-201ENST00000555578 SIPA1L3O60292 1781 aaPredicted RBP17.45■□□□□ 0.38
LINC00638-201ENST00000555578 HEG1Q9ULI3 1381 aa17.45■□□□□ 0.38
LINC00638-201ENST00000555578 MYL6BP14649 208 aa17.45■□□□□ 0.38
LINC00638-201ENST00000555578 DBF4Q9UBU7 674 aaPredicted RBP17.45■□□□□ 0.38
LINC00638-201ENST00000555578 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
LINC00638-201ENST00000555578 C16orf71Q8IYS4 520 aaPredicted RBP17.44■□□□□ 0.38
LINC00638-201ENST00000555578 UBE2Q2Q8WVN8 375 aa17.44■□□□□ 0.38
LINC00638-201ENST00000555578 USP44Q9H0E7 712 aa17.44■□□□□ 0.38
LINC00638-201ENST00000555578 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
LINC00638-201ENST00000555578 ABCC6O95255 1503 aa17.44■□□□□ 0.38
LINC00638-201ENST00000555578 SMARCA5O60264 1052 aaPredicted RBP17.44■□□□□ 0.38
LINC00638-201ENST00000555578 TTC5Q8N0Z6 440 aa17.43■□□□□ 0.38
LINC00638-201ENST00000555578 DCTPP1Q9H773 170 aa17.43■□□□□ 0.38
LINC00638-201ENST00000555578 KAT6BQ8WYB5 2073 aa17.43■□□□□ 0.38
LINC00638-201ENST00000555578 GNAI2P04899 355 aa17.43■□□□□ 0.38
LINC00638-201ENST00000555578 RPAP2Q8IXW5 612 aaPredicted RBP17.43■□□□□ 0.38
LINC00638-201ENST00000555578 LRRFIP2Q9Y608 721 aaKnown RBP17.43■□□□□ 0.38
LINC00638-201ENST00000555578 ADAMTS7Q9UKP4 1686 aa17.42■□□□□ 0.38
LINC00638-201ENST00000555578 NUTM2BA6NNL0 878 aaPredicted RBP17.42■□□□□ 0.38
LINC00638-201ENST00000555578 NUTM2EB1AL46 878 aaPredicted RBP17.42■□□□□ 0.38
LINC00638-201ENST00000555578 NUTM2AQ8IVF1 878 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms