RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 TAF7Q15545 349 aaPredicted RBP14.34□□□□□ -0.11
XRCC3-213ENST00000555451 ALDH1L2Q3SY69 923 aa14.34□□□□□ -0.11
XRCC3-213ENST00000555451 IFNL2Q8IZJ0 200 aa14.34□□□□□ -0.11
XRCC3-213ENST00000555451 TSPYL4Q9UJ04 414 aa14.34□□□□□ -0.11
XRCC3-213ENST00000555451 KDM3BQ7LBC6 1761 aa14.34□□□□□ -0.11
XRCC3-213ENST00000555451 SIPA1L3O60292 1781 aaPredicted RBP14.33□□□□□ -0.12
XRCC3-213ENST00000555451 BCAR3O75815 825 aa14.33□□□□□ -0.12
XRCC3-213ENST00000555451 PHKG2P15735 406 aa14.33□□□□□ -0.12
XRCC3-213ENST00000555451 TWISTNBQ3B726 338 aaPredicted RBP14.33□□□□□ -0.12
XRCC3-213ENST00000555451 PCDH11XQ9BZA7 1347 aa14.33□□□□□ -0.12
XRCC3-213ENST00000555451 PCDH11YQ9BZA8 1340 aa14.33□□□□□ -0.12
XRCC3-213ENST00000555451 EP400Q96L91 3159 aa14.32□□□□□ -0.12
XRCC3-213ENST00000555451 TEFQ10587 303 aa14.32□□□□□ -0.12
XRCC3-213ENST00000555451 CDCA7Q9BWT1 371 aaPredicted RBP14.32□□□□□ -0.12
XRCC3-213ENST00000555451 SOS1Q07889 1333 aaPredicted RBP14.32□□□□□ -0.12
XRCC3-213ENST00000555451 SHANK3Q9BYB0 1731 aa14.32□□□□□ -0.12
XRCC3-213ENST00000555451 DISP2A7MBM2 1401 aa14.32□□□□□ -0.12
XRCC3-213ENST00000555451 MRC1P22897 1456 aa14.31□□□□□ -0.12
XRCC3-213ENST00000555451 PLIN1O60240 522 aa14.31□□□□□ -0.12
XRCC3-213ENST00000555451 VAMP4O75379 141 aa14.31□□□□□ -0.12
XRCC3-213ENST00000555451 CANXP27824 592 aaKnown RBP14.31□□□□□ -0.12
XRCC3-213ENST00000555451 MPRIPQ6WCQ1 1025 aa14.31□□□□□ -0.12
XRCC3-213ENST00000555451 ZCRB1Q8TBF4 217 aaKnown RBP14.31□□□□□ -0.12
XRCC3-213ENST00000555451 LGR6Q9HBX8 967 aa14.31□□□□□ -0.12
XRCC3-213ENST00000555451 SMC4Q9NTJ3 1288 aa14.31□□□□□ -0.12
XRCC3-213ENST00000555451 KIF16BQ96L93 1317 aa14.31□□□□□ -0.12
XRCC3-213ENST00000555451 BRPF1P55201 1214 aaPredicted RBP14.3□□□□□ -0.12
XRCC3-213ENST00000555451 CCDC125Q86Z20 511 aa14.3□□□□□ -0.12
XRCC3-213ENST00000555451 C8orf58Q8NAV2 365 aa14.3□□□□□ -0.12
XRCC3-213ENST00000555451 SSH1Q8WYL5 1049 aa14.3□□□□□ -0.12
XRCC3-213ENST00000555451 DCAF5Q96JK2 942 aa14.3□□□□□ -0.12
XRCC3-213ENST00000555451 KDM6AO15550 1401 aaPredicted RBP14.3□□□□□ -0.12
XRCC3-213ENST00000555451 CYP27B1O15528 508 aa14.29□□□□□ -0.12
XRCC3-213ENST00000555451 MS4A1P11836 297 aa14.29□□□□□ -0.12
XRCC3-213ENST00000555451 PDE3AQ14432 1141 aa14.29□□□□□ -0.12
XRCC3-213ENST00000555451 TSPYL6Q8N831 410 aa14.29□□□□□ -0.12
XRCC3-213ENST00000555451 PPP4R2Q9NY27 417 aa14.29□□□□□ -0.12
XRCC3-213ENST00000555451 ZKSCAN2Q63HK3 967 aa14.28□□□□□ -0.12
XRCC3-213ENST00000555451 FRAT1Q92837 279 aaPredicted RBP14.28□□□□□ -0.12
XRCC3-213ENST00000555451 BCL2L13Q9BXK5 485 aa14.28□□□□□ -0.12
XRCC3-213ENST00000555451 MIS18AQ9NYP9 233 aa14.28□□□□□ -0.12
XRCC3-213ENST00000555451 BTBD11A6QL63 1104 aa14.27□□□□□ -0.13
XRCC3-213ENST00000555451 ELL2O00472 640 aaPredicted RBP14.27□□□□□ -0.13
XRCC3-213ENST00000555451 IPO8O15397 1037 aaKnown RBP14.27□□□□□ -0.13
XRCC3-213ENST00000555451 DDB1Q16531 1140 aa14.27□□□□□ -0.13
XRCC3-213ENST00000555451 NKX1-1Q15270 411 aaPredicted RBP14.26□□□□□ -0.13
XRCC3-213ENST00000555451 FAM182BQ5T319 152 aa14.26□□□□□ -0.13
XRCC3-213ENST00000555451 FAM196AQ6ZSG2 479 aa14.26□□□□□ -0.13
XRCC3-213ENST00000555451 CHMP4AQ9BY43 222 aa14.26□□□□□ -0.13
XRCC3-213ENST00000555451 SLC52A2Q9HAB3 445 aa14.26□□□□□ -0.13
XRCC3-213ENST00000555451 TNS2Q63HR2 1409 aa14.25□□□□□ -0.13
XRCC3-213ENST00000555451 HOXB7P09629 217 aa14.25□□□□□ -0.13
XRCC3-213ENST00000555451 KRT24Q2M2I5 525 aa14.25□□□□□ -0.13
XRCC3-213ENST00000555451 C20orf194Q5TEA3 1177 aa14.25□□□□□ -0.13
XRCC3-213ENST00000555451 MRPL50Q8N5N7 158 aaKnown RBP14.25□□□□□ -0.13
XRCC3-213ENST00000555451 EXOC6Q8TAG9 804 aa14.25□□□□□ -0.13
XRCC3-213ENST00000555451 CRBNQ96SW2 442 aa14.25□□□□□ -0.13
XRCC3-213ENST00000555451 EXOC5O00471 708 aa14.24□□□□□ -0.13
XRCC3-213ENST00000555451 EIF4A1P60842 406 aaKnown RBP14.24□□□□□ -0.13
XRCC3-213ENST00000555451 ATF7IPQ6VMQ6 1270 aa14.24□□□□□ -0.13
XRCC3-213ENST00000555451 ARHGAP45Q92619 1136 aa14.24□□□□□ -0.13
XRCC3-213ENST00000555451 NOB1Q9ULX3 412 aaKnown RBP14.24□□□□□ -0.13
XRCC3-213ENST00000555451 CACNA1FO60840 1977 aa14.23□□□□□ -0.13
XRCC3-213ENST00000555451 ERVV-2B6SEH9 535 aa14.23□□□□□ -0.13
XRCC3-213ENST00000555451 BCL9O00512 1426 aa14.23□□□□□ -0.13
XRCC3-213ENST00000555451 CABP4P57796 275 aa14.22□□□□□ -0.13
XRCC3-213ENST00000555451 CCDC30Q5VVM6 783 aa14.22□□□□□ -0.13
XRCC3-213ENST00000555451 FTSJ3Q8IY81 847 aaKnown RBP14.22□□□□□ -0.13
XRCC3-213ENST00000555451 DZIP1LQ8IYY4 767 aaKnown RBP14.22□□□□□ -0.13
XRCC3-213ENST00000555451 MARCH10Q8NA82 808 aaPredicted RBP14.22□□□□□ -0.13
XRCC3-213ENST00000555451 DDX54Q8TDD1 881 aaKnown RBP14.22□□□□□ -0.13
XRCC3-213ENST00000555451 HEG1Q9ULI3 1381 aa14.22□□□□□ -0.13
XRCC3-213ENST00000555451 TOGARAM1Q9Y4F4 1720 aa14.21□□□□□ -0.13
XRCC3-213ENST00000555451 TRIM27P14373 513 aa14.21□□□□□ -0.13
XRCC3-213ENST00000555451 AAMPQ13685 434 aa14.21□□□□□ -0.13
XRCC3-213ENST00000555451 NFATC2IPQ8NCF5 419 aa14.21□□□□□ -0.13
XRCC3-213ENST00000555451 STK31Q9BXU1 1019 aa14.21□□□□□ -0.13
XRCC3-213ENST00000555451 PAPPAQ13219 1627 aa14.21□□□□□ -0.13
XRCC3-213ENST00000555451 SF3B2Q13435 895 aaKnown RBP14.2□□□□□ -0.14
XRCC3-213ENST00000555451 ZNF790Q6PG37 636 aa14.2□□□□□ -0.14
XRCC3-213ENST00000555451 PANK1Q8TE04 598 aa14.2□□□□□ -0.14
XRCC3-213ENST00000555451 API5Q9BZZ5 524 aaKnown RBP14.2□□□□□ -0.14
XRCC3-213ENST00000555451 PTPRCP08575 1304 aa14.19□□□□□ -0.14
XRCC3-213ENST00000555451 KCNQ3O43525 872 aa14.19□□□□□ -0.14
XRCC3-213ENST00000555451 TRIM37O94972 964 aa14.19□□□□□ -0.14
XRCC3-213ENST00000555451 MVPQ14764 893 aaKnown RBP14.19□□□□□ -0.14
XRCC3-213ENST00000555451 TTC5Q8N0Z6 440 aa14.19□□□□□ -0.14
XRCC3-213ENST00000555451 CCDC136Q96JN2 1154 aa14.19□□□□□ -0.14
XRCC3-213ENST00000555451 UBR2Q8IWV8 1755 aa14.19□□□□□ -0.14
XRCC3-213ENST00000555451 TCERG1O14776 1098 aaKnown RBP14.18□□□□□ -0.14
XRCC3-213ENST00000555451 RLBP1P12271 317 aa14.18□□□□□ -0.14
XRCC3-213ENST00000555451 HDGFL1Q5TGJ6 251 aa14.18□□□□□ -0.14
XRCC3-213ENST00000555451 CLUAP1Q96AJ1 413 aa14.18□□□□□ -0.14
XRCC3-213ENST00000555451 COG6Q9Y2V7 657 aa14.18□□□□□ -0.14
XRCC3-213ENST00000555451 LAMB4A4D0S4 1761 aa14.17□□□□□ -0.14
XRCC3-213ENST00000555451 GIGYF1O75420 1035 aaPredicted RBP14.17□□□□□ -0.14
XRCC3-213ENST00000555451 SLC4A2P04920 1241 aa14.17□□□□□ -0.14
XRCC3-213ENST00000555451 B4GALNT3Q6L9W6 998 aa14.17□□□□□ -0.14
XRCC3-213ENST00000555451 DEFB132Q7Z7B7 95 aa14.17□□□□□ -0.14
XRCC3-213ENST00000555451 DDX19BQ9UMR2 479 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms