RNA–Protein interactions for RNA: ENST00000555412.1

SRSF5-210, Transcript of serine and arginine rich splicing factor 5, humanhuman

TSL 2

Gene SRSF5, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-210ENST00000555412 SIPA1L3O60292 1781 aaPredicted RBP18.09■□□□□ 0.49
SRSF5-210ENST00000555412 SF3B2Q13435 895 aaKnown RBP18.08■□□□□ 0.48
SRSF5-210ENST00000555412 TAF7Q15545 349 aaPredicted RBP18.08■□□□□ 0.48
SRSF5-210ENST00000555412 WWC1Q8IX03 1113 aa18.08■□□□□ 0.48
SRSF5-210ENST00000555412 THUMPD2Q9BTF0 503 aaKnown RBP18.08■□□□□ 0.48
SRSF5-210ENST00000555412 TNS1Q9HBL0 1735 aaKnown RBP18.07■□□□□ 0.48
SRSF5-210ENST00000555412 APBA3O96018 575 aa18.07■□□□□ 0.48
SRSF5-210ENST00000555412 SENP3-EIF4A1A0A087X0R7 540 aa18.06■□□□□ 0.48
SRSF5-210ENST00000555412 PLSCR1O15162 318 aa18.06■□□□□ 0.48
SRSF5-210ENST00000555412 CALD1Q05682 793 aaKnown RBP18.06■□□□□ 0.48
SRSF5-210ENST00000555412 SMARCC1Q92922 1105 aaPredicted RBP18.06■□□□□ 0.48
SRSF5-210ENST00000555412 SALL2Q9Y467 1007 aaPredicted RBP18.06■□□□□ 0.48
SRSF5-210ENST00000555412 ATG3Q9NT62 314 aa18.05■□□□□ 0.48
SRSF5-210ENST00000555412 BABAM1Q9NWV8 329 aa18.05■□□□□ 0.48
SRSF5-210ENST00000555412 ASAP1Q9ULH1 1129 aa18.05■□□□□ 0.48
SRSF5-210ENST00000555412 BTBD11A6QL63 1104 aa18.04■□□□□ 0.48
SRSF5-210ENST00000555412 WDR63Q8IWG1 891 aa18.04■□□□□ 0.48
SRSF5-210ENST00000555412 BAG6P46379 1132 aa18.03■□□□□ 0.48
SRSF5-210ENST00000555412 CHL1O00533 1208 aa18.02■□□□□ 0.48
SRSF5-210ENST00000555412 CFAP44Q96MT7 982 aa18.02■□□□□ 0.48
SRSF5-210ENST00000555412 IL16Q14005 1332 aa18.01■□□□□ 0.47
SRSF5-210ENST00000555412 ZNF521Q96K83 1311 aa18.01■□□□□ 0.47
SRSF5-210ENST00000555412 SLC39A6Q13433 755 aa18.01■□□□□ 0.47
SRSF5-210ENST00000555412 ZNF790Q6PG37 636 aa18.01■□□□□ 0.47
SRSF5-210ENST00000555412 RGPD3A6NKT7 1758 aaPredicted RBP18.01■□□□□ 0.47
SRSF5-210ENST00000555412 RGPD4Q7Z3J3 1758 aa18.01■□□□□ 0.47
SRSF5-210ENST00000555412 LY75O60449 1722 aa18.01■□□□□ 0.47
SRSF5-210ENST00000555412 ZNF853P0CG23 659 aa18■□□□□ 0.47
SRSF5-210ENST00000555412 GNAI1P63096 354 aa18■□□□□ 0.47
SRSF5-210ENST00000555412 HNRNPUQ00839 825 aaKnown RBP eCLIP18■□□□□ 0.47
SRSF5-210ENST00000555412 TTC5Q8N0Z6 440 aa18■□□□□ 0.47
SRSF5-210ENST00000555412 CAMKK2Q96RR4 588 aa18■□□□□ 0.47
SRSF5-210ENST00000555412 IFT57Q9NWB7 429 aa18■□□□□ 0.47
SRSF5-210ENST00000555412 MIS18AQ9NYP9 233 aa18■□□□□ 0.47
SRSF5-210ENST00000555412 PAPPAQ13219 1627 aa18■□□□□ 0.47
SRSF5-210ENST00000555412 PALLDQ8WX93 1383 aa18■□□□□ 0.47
SRSF5-210ENST00000555412 EN1Q05925 392 aaPredicted RBP17.99■□□□□ 0.47
SRSF5-210ENST00000555412 TSPYL4Q9UJ04 414 aa17.99■□□□□ 0.47
SRSF5-210ENST00000555412 KDM3BQ7LBC6 1761 aa17.99■□□□□ 0.47
SRSF5-210ENST00000555412 DEFB132Q7Z7B7 95 aa17.98■□□□□ 0.47
SRSF5-210ENST00000555412 PROM2Q8N271 834 aa17.98■□□□□ 0.47
SRSF5-210ENST00000555412 LAS1LQ9Y4W2 734 aaKnown RBP17.98■□□□□ 0.47
SRSF5-210ENST00000555412 UBR2Q8IWV8 1755 aa17.98■□□□□ 0.47
SRSF5-210ENST00000555412 LOC102724428A0A0B4J2F2 783 aa17.97■□□□□ 0.47
SRSF5-210ENST00000555412 SOCS7O14512 581 aa17.97■□□□□ 0.47
SRSF5-210ENST00000555412 KCNQ3O43525 872 aa17.97■□□□□ 0.47
SRSF5-210ENST00000555412 PTCD1O75127 700 aaKnown RBP17.97■□□□□ 0.47
SRSF5-210ENST00000555412 HMGB2P26583 209 aaKnown RBP17.97■□□□□ 0.47
SRSF5-210ENST00000555412 SIK1P57059 783 aa17.97■□□□□ 0.47
SRSF5-210ENST00000555412 TXNRD1Q16881 649 aa17.97■□□□□ 0.47
SRSF5-210ENST00000555412 SLC27A3Q5K4L6 730 aa17.97■□□□□ 0.47
SRSF5-210ENST00000555412 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
SRSF5-210ENST00000555412 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
SRSF5-210ENST00000555412 GOLGA2Q08379 1002 aa17.96■□□□□ 0.47
SRSF5-210ENST00000555412 EZH2Q15910 746 aaKnown RBP17.96■□□□□ 0.47
SRSF5-210ENST00000555412 VSIG10Q8N0Z9 540 aa17.96■□□□□ 0.47
SRSF5-210ENST00000555412 ZNF496Q96IT1 587 aaPredicted RBP17.96■□□□□ 0.47
SRSF5-210ENST00000555412 FMNL2Q96PY5 1086 aa17.96■□□□□ 0.47
SRSF5-210ENST00000555412 KCPQ6ZWJ8 1503 aa17.95■□□□□ 0.46
SRSF5-210ENST00000555412 EIF4A1P60842 406 aaKnown RBP17.95■□□□□ 0.46
SRSF5-210ENST00000555412 SLC4A9Q96Q91 983 aa17.95■□□□□ 0.46
SRSF5-210ENST00000555412 MBIPQ9NS73 344 aa17.95■□□□□ 0.46
SRSF5-210ENST00000555412 CCNL1Q9UK58 526 aaPredicted RBP17.94■□□□□ 0.46
SRSF5-210ENST00000555412 HEG1Q9ULI3 1381 aa17.93■□□□□ 0.46
SRSF5-210ENST00000555412 ATP6V1AP38606 617 aa17.93■□□□□ 0.46
SRSF5-210ENST00000555412 TEX13AQ9BXU3 409 aaPredicted RBP17.93■□□□□ 0.46
SRSF5-210ENST00000555412 MYH16Q9H6N6 1097 aa17.93■□□□□ 0.46
SRSF5-210ENST00000555412 LRRC4BQ9NT99 713 aa17.93■□□□□ 0.46
SRSF5-210ENST00000555412 ZBED9Q6R2W3 1325 aa17.93■□□□□ 0.46
SRSF5-210ENST00000555412 E9PSI1 815 aa17.92■□□□□ 0.46
SRSF5-210ENST00000555412 SPINK5Q9NQ38 1064 aaPredicted RBP17.92■□□□□ 0.46
SRSF5-210ENST00000555412 TAF1LQ8IZX4 1826 aa17.92■□□□□ 0.46
SRSF5-210ENST00000555412 RREB1Q92766 1687 aa17.91■□□□□ 0.46
SRSF5-210ENST00000555412 SNRPA1P09661 255 aaKnown RBP17.91■□□□□ 0.46
SRSF5-210ENST00000555412 KCNQ4P56696 695 aa17.91■□□□□ 0.46
SRSF5-210ENST00000555412 SLFN5Q08AF3 891 aa17.91■□□□□ 0.46
SRSF5-210ENST00000555412 ITPK1Q13572 414 aa17.91■□□□□ 0.46
SRSF5-210ENST00000555412 CICQ96RK0 1608 aaPredicted RBP17.9■□□□□ 0.46
SRSF5-210ENST00000555412 GIGYF1O75420 1035 aaPredicted RBP17.9■□□□□ 0.46
SRSF5-210ENST00000555412 TSR2Q969E8 191 aaKnown RBP17.9■□□□□ 0.46
SRSF5-210ENST00000555412 DNAJC10Q8IXB1 793 aa17.89■□□□□ 0.45
SRSF5-210ENST00000555412 TRMT2AQ8IZ69 625 aaKnown RBP17.89■□□□□ 0.45
SRSF5-210ENST00000555412 CDCA7LQ96GN5 454 aa17.89■□□□□ 0.45
SRSF5-210ENST00000555412 TJP1Q07157 1748 aa17.89■□□□□ 0.45
SRSF5-210ENST00000555412 STARD3NLO95772 234 aa17.88■□□□□ 0.45
SRSF5-210ENST00000555412 FANCIQ9NVI1 1328 aa17.88■□□□□ 0.45
SRSF5-210ENST00000555412 C5P01031 1676 aa17.87■□□□□ 0.45
SRSF5-210ENST00000555412 COL5A3P25940 1745 aaPredicted RBP17.87■□□□□ 0.45
SRSF5-210ENST00000555412 NUP188Q5SRE5 1749 aa17.87■□□□□ 0.45
SRSF5-210ENST00000555412 HOXB7P09629 217 aa17.87■□□□□ 0.45
SRSF5-210ENST00000555412 CYP19A1P11511 503 aaPredicted RBP17.87■□□□□ 0.45
SRSF5-210ENST00000555412 RC3H1Q5TC82 1133 aaKnown RBP17.87■□□□□ 0.45
SRSF5-210ENST00000555412 LINC00116Q8NCU8 138 aa17.87■□□□□ 0.45
SRSF5-210ENST00000555412 USP16Q9Y5T5 823 aa17.87■□□□□ 0.45
SRSF5-210ENST00000555412 SOS1Q07889 1333 aaPredicted RBP17.87■□□□□ 0.45
SRSF5-210ENST00000555412 DUSP27Q5VZP5 1158 aa17.86■□□□□ 0.45
SRSF5-210ENST00000555412 C8orf58Q8NAV2 365 aa17.86■□□□□ 0.45
SRSF5-210ENST00000555412 PRAMEF22A3QJZ6 481 aa17.85■□□□□ 0.45
SRSF5-210ENST00000555412 KRT24Q2M2I5 525 aa17.85■□□□□ 0.45
SRSF5-210ENST00000555412 NBPF14Q5TI25 921 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms