RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 ARHGEF5Q12774 1597 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 MAST1Q9Y2H9 1570 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 CCDC69A6NI79 296 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 UQCRFS1P1P0C7P4 283 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 GLRX3O76003 335 aaKnown RBP9.95□□□□□ -0.82
LINC00641-201ENST00000555379 POLD1P28340 1107 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 ANKRD18BA2A2Z9 1011 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 CYP46A1Q9Y6A2 500 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 UBAP1LF5GYI3 381 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 KIF20AO95235 890 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 NBPF1Q3BBV0 1214 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 TPRNQ4KMQ1 711 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 CCDC12Q8WUD4 166 aaPredicted RBP9.95□□□□□ -0.82
LINC00641-201ENST00000555379 SMARCE1Q969G3 411 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 PDCL3Q9H2J4 239 aa9.95□□□□□ -0.82
LINC00641-201ENST00000555379 KCNA4P22459 653 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 TMPOP42166 694 aaKnown RBP9.94□□□□□ -0.82
LINC00641-201ENST00000555379 MAP3K12Q12852 859 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 ODF2Q5BJF6 829 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 PPP1R1BQ9UD71 204 aaPredicted RBP9.94□□□□□ -0.82
LINC00641-201ENST00000555379 HDAC9Q9UKV0 1011 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 PDE4AP27815 886 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 MVPQ14764 893 aaKnown RBP9.94□□□□□ -0.82
LINC00641-201ENST00000555379 HOOK2Q96ED9 719 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 UBAC1Q9BSL1 405 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 MYO1BO43795 1136 aa9.94□□□□□ -0.82
LINC00641-201ENST00000555379 SNRPA1P09661 255 aaKnown RBP9.94□□□□□ -0.82
LINC00641-201ENST00000555379 DDX49Q9Y6V7 483 aaKnown RBP9.94□□□□□ -0.82
LINC00641-201ENST00000555379 SMC2O95347 1197 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 KCNA6P17658 529 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 PCMTD1Q96MG8 357 aaPredicted RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 MAGEC2Q9UBF1 373 aaPredicted RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 DNMT1P26358 1616 aaKnown RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 FLT4P35916 1363 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 PES1O00541 588 aaKnown RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 BAG3O95817 575 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 IFIT5Q13325 482 aaKnown RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 IMMTQ16891 758 aaKnown RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 BCL2L13Q9BXK5 485 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 RAB34Q9BZG1 259 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 ZMYM3Q14202 1370 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 GZF1Q9H116 711 aaPredicted RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 U3KPZ7 1027 aaPredicted RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 PPP4R3AQ6IN85 833 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 GTPBP4Q9BZE4 634 aaKnown RBP9.93□□□□□ -0.82
LINC00641-201ENST00000555379 ARHGAP45Q92619 1136 aa9.93□□□□□ -0.82
LINC00641-201ENST00000555379 CT47A1Q5JQC4 288 aaPredicted RBP9.92□□□□□ -0.82
LINC00641-201ENST00000555379 C22orf23Q9BZE7 217 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 DDX46Q7L014 1031 aaKnown RBP9.92□□□□□ -0.82
LINC00641-201ENST00000555379 NECTIN2Q92692 538 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 BCL11BQ9C0K0 894 aaPredicted RBP9.92□□□□□ -0.82
LINC00641-201ENST00000555379 PRM3Q9NNZ6 103 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 ALDH1L1O75891 902 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 SYCP1Q15431 976 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 CIZ1Q9ULV3 898 aaPredicted RBP9.92□□□□□ -0.82
LINC00641-201ENST00000555379 ASXL1Q8IXJ9 1541 aa9.92□□□□□ -0.82
LINC00641-201ENST00000555379 MPHOSPH10O00566 681 aaKnown RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 FLAD1Q8NFF5 587 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 EYA3Q99504 573 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 PAIP2Q9BPZ3 127 aaKnown RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 RBM28Q9NW13 759 aaKnown RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 ZFYP08048 801 aaPredicted RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 METTL24Q5JXM2 366 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 PLXNC1O60486 1568 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 OFD1O75665 1012 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 HLA-DOAP06340 250 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 ZC3H6P61129 1189 aaKnown RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 CCDC152Q4G0S7 254 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 AKAP4Q5JQC9 854 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 LRP2BPQ9P2M1 347 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 PLCG2P16885 1265 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 ZCRB1Q8TBF4 217 aaKnown RBP9.91□□□□□ -0.82
LINC00641-201ENST00000555379 LRRC27Q9C0I9 530 aa9.91□□□□□ -0.82
LINC00641-201ENST00000555379 TRAPPC8Q9Y2L5 1435 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 KINO60870 393 aaKnown RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 EXOC6Q8TAG9 804 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 CUL5Q93034 780 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 AIDAQ96BJ3 306 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 ARGLU1Q9NWB6 273 aaPredicted RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 RBM27Q9P2N5 1060 aaKnown RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 LMTK3Q96Q04 1460 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 PLIN1O60240 522 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 TDO2P48775 406 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 DUSP27Q5VZP5 1158 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 SLKQ9H2G2 1235 aaPredicted RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 RAI14Q9P0K7 980 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 ARAP3Q8WWN8 1544 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 PCDH11XQ9BZA7 1347 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 PCDH11YQ9BZA8 1340 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 SAMD9Q5K651 1589 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 NPC1L1Q9UHC9 1359 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 NF2P35240 595 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 RBM5P52756 815 aaKnown RBP eCLIP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 TMEM132AQ24JP5 1023 aa9.9□□□□□ -0.82
LINC00641-201ENST00000555379 CWC25Q9NXE8 425 aaPredicted RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 WDR33Q9C0J8 1336 aaKnown RBP9.9□□□□□ -0.82
LINC00641-201ENST00000555379 DNAAF4Q8WXU2 420 aa9.9□□□□□ -0.83
LINC00641-201ENST00000555379 SEC63Q9UGP8 760 aaKnown RBP9.9□□□□□ -0.83
LINC00641-201ENST00000555379 CFAP45Q9UL16 551 aa9.9□□□□□ -0.83
LINC00641-201ENST00000555379 ACEP12821 1306 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms