RNA–Protein interactions for RNA: ENST00000555370.5

IFT43-210, Transcript of intraflagellar transport 43, humanhuman

TSL 3

Gene IFT43, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-210ENST00000555370 LMOD3Q0VAK6 560 aa15.17■□□□□ 0.02
IFT43-210ENST00000555370 PRDM11Q9NQV5 511 aa15.17■□□□□ 0.02
IFT43-210ENST00000555370 TRIM35Q9UPQ4 493 aa15.17■□□□□ 0.02
IFT43-210ENST00000555370 AXIN2Q9Y2T1 843 aa15.17■□□□□ 0.02
IFT43-210ENST00000555370 PKD1L3Q7Z443 1732 aa15.17■□□□□ 0.02
IFT43-210ENST00000555370 WNK3Q9BYP7 1800 aa15.16■□□□□ 0.02
IFT43-210ENST00000555370 TOMM70O94826 608 aa15.16■□□□□ 0.02
IFT43-210ENST00000555370 NBPF6Q5VWK0 638 aa15.16■□□□□ 0.02
IFT43-210ENST00000555370 PTF1AQ7RTS3 328 aa15.16■□□□□ 0.02
IFT43-210ENST00000555370 NBPF4Q96M43 638 aa15.16■□□□□ 0.02
IFT43-210ENST00000555370 WDR90Q96KV7 1748 aa15.16■□□□□ 0.02
IFT43-210ENST00000555370 RGPD3A6NKT7 1758 aaPredicted RBP15.16■□□□□ 0.02
IFT43-210ENST00000555370 RGPD4Q7Z3J3 1758 aa15.16■□□□□ 0.02
IFT43-210ENST00000555370 COL5A2P05997 1499 aaPredicted RBP15.15■□□□□ 0.02
IFT43-210ENST00000555370 CHRNA2Q15822 529 aa15.15■□□□□ 0.02
IFT43-210ENST00000555370 BARGINQ6ZT62 677 aa15.15■□□□□ 0.02
IFT43-210ENST00000555370 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
IFT43-210ENST00000555370 IL16Q14005 1332 aa15.15■□□□□ 0.02
IFT43-210ENST00000555370 DUSP27Q5VZP5 1158 aa15.14■□□□□ 0.01
IFT43-210ENST00000555370 USHBP1Q8N6Y0 703 aa15.14■□□□□ 0.01
IFT43-210ENST00000555370 TXNRD1Q16881 649 aa15.13■□□□□ 0.01
IFT43-210ENST00000555370 GAS2L2Q8NHY3 880 aa15.13■□□□□ 0.01
IFT43-210ENST00000555370 PLEKHG2Q9H7P9 1386 aa15.12■□□□□ 0.01
IFT43-210ENST00000555370 POLD1P28340 1107 aa15.12■□□□□ 0.01
IFT43-210ENST00000555370 CALD1Q05682 793 aaKnown RBP15.12■□□□□ 0.01
IFT43-210ENST00000555370 MYH16Q9H6N6 1097 aa15.12■□□□□ 0.01
IFT43-210ENST00000555370 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
IFT43-210ENST00000555370 SCN11AQ9UI33 1791 aa15.11■□□□□ 0.01
IFT43-210ENST00000555370 CSB-PGBD3P0DP91 1061 aa15.11■□□□□ 0.01
IFT43-210ENST00000555370 GTF3C3Q9Y5Q9 886 aa15.11■□□□□ 0.01
IFT43-210ENST00000555370 ADAMTS7Q9UKP4 1686 aa15.1■□□□□ 0.01
IFT43-210ENST00000555370 MTHFSDQ2M296 383 aaKnown RBP15.1■□□□□ 0.01
IFT43-210ENST00000555370 NLRP2Q9NX02 1062 aa15.1■□□□□ 0.01
IFT43-210ENST00000555370 SUPT16HQ9Y5B9 1047 aaKnown RBP15.1■□□□□ 0.01
IFT43-210ENST00000555370 SIPA1L3O60292 1781 aaPredicted RBP15.1■□□□□ 0.01
IFT43-210ENST00000555370 WDR17Q8IZU2 1322 aa15.1■□□□□ 0.01
IFT43-210ENST00000555370 RCAN3Q9UKA8 241 aa15.09■□□□□ 0.01
IFT43-210ENST00000555370 PCNTO95613 3336 aa15.09■□□□□ 0.01
IFT43-210ENST00000555370 NEFLP07196 543 aa15.08■□□□□ 0
IFT43-210ENST00000555370 OVOS2A0A0G2JMS6 1433 aa15.08■□□□□ 0
IFT43-210ENST00000555370 MEGF6O75095 1541 aa15.07■□□□□ 0
IFT43-210ENST00000555370 KDM3BQ7LBC6 1761 aa15.07■□□□□ 0
IFT43-210ENST00000555370 HTATSF1O43719 755 aaKnown RBP15.07■□□□□ 0
IFT43-210ENST00000555370 PLEKHO1Q53GL0 409 aaPredicted RBP15.07■□□□□ 0
IFT43-210ENST00000555370 FANCIQ9NVI1 1328 aa15.07■□□□□ 0
IFT43-210ENST00000555370 EVA1CP58658 441 aa15.06■□□□□ 0
IFT43-210ENST00000555370 GNAI1P63096 354 aa15.06■□□□□ 0
IFT43-210ENST00000555370 MLLT1Q03111 559 aaPredicted RBP15.06■□□□□ 0
IFT43-210ENST00000555370 AMOTQ4VCS5 1084 aa15.06■□□□□ 0
IFT43-210ENST00000555370 THUMPD2Q9BTF0 503 aaKnown RBP15.06■□□□□ 0
IFT43-210ENST00000555370 IFT57Q9NWB7 429 aa15.06■□□□□ 0
IFT43-210ENST00000555370 RNF123Q5XPI4 1314 aa15.06■□□□□ 0
IFT43-210ENST00000555370 CRB1P82279 1406 aa15.06■□□□□ 0
IFT43-210ENST00000555370 GNAT3A8MTJ3 354 aa15.05■□□□□ -0
IFT43-210ENST00000555370 TATP17735 454 aaPredicted RBP15.05■□□□□ -0
IFT43-210ENST00000555370 RAPGEF4Q8WZA2 1011 aa15.05■□□□□ -0
IFT43-210ENST00000555370 RTF1Q92541 710 aaKnown RBP15.05■□□□□ -0
IFT43-210ENST00000555370 DCTN1Q14203 1278 aa15.04■□□□□ -0
IFT43-210ENST00000555370 ZNF530Q6P9A1 599 aaPredicted RBP15.04■□□□□ -0
IFT43-210ENST00000555370 TOM1L2Q6ZVM7 507 aa15.04■□□□□ -0
IFT43-210ENST00000555370 MCM10Q7L590 875 aa15.04■□□□□ -0
IFT43-210ENST00000555370 TSR2Q969E8 191 aaKnown RBP15.04■□□□□ -0
IFT43-210ENST00000555370 ZNF853P0CG23 659 aa15.03■□□□□ -0
IFT43-210ENST00000555370 CFAP44Q96MT7 982 aa15.03■□□□□ -0
IFT43-210ENST00000555370 CARD10Q9BWT7 1032 aa15.03■□□□□ -0
IFT43-210ENST00000555370 CT47B1P0C2W7 299 aaPredicted RBP15.02■□□□□ -0
IFT43-210ENST00000555370 AKAP4Q5JQC9 854 aa15.02■□□□□ -0
IFT43-210ENST00000555370 LARP1Q6PKG0 1096 aaKnown RBP15.02■□□□□ -0
IFT43-210ENST00000555370 RBM46Q8TBY0 533 aaKnown RBP15.02■□□□□ -0
IFT43-210ENST00000555370 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.02■□□□□ -0
IFT43-210ENST00000555370 LAS1LQ9Y4W2 734 aaKnown RBP15.02■□□□□ -0
IFT43-210ENST00000555370 RRP1P56182 461 aaKnown RBP15.01□□□□□ -0.01
IFT43-210ENST00000555370 C1orf141Q5JVX7 400 aa15.01□□□□□ -0.01
IFT43-210ENST00000555370 SPG7Q9UQ90 795 aa15.01□□□□□ -0.01
IFT43-210ENST00000555370 CEMIPQ8WUJ3 1361 aa15□□□□□ -0.01
IFT43-210ENST00000555370 CACNA1FO60840 1977 aa15□□□□□ -0.01
IFT43-210ENST00000555370 EXOSC9Q06265 439 aaKnown RBP15□□□□□ -0.01
IFT43-210ENST00000555370 FKBP8Q14318 412 aa15□□□□□ -0.01
IFT43-210ENST00000555370 SLC16A10Q8TF71 515 aa15□□□□□ -0.01
IFT43-210ENST00000555370 MBIPQ9NS73 344 aa15□□□□□ -0.01
IFT43-210ENST00000555370 NMRK2Q9NPI5 230 aa14.99□□□□□ -0.01
IFT43-210ENST00000555370 MRC1P22897 1456 aa14.98□□□□□ -0.01
IFT43-210ENST00000555370 CHL1O00533 1208 aa14.98□□□□□ -0.01
IFT43-210ENST00000555370 IL2RBP14784 551 aa14.98□□□□□ -0.01
IFT43-210ENST00000555370 FSTL1Q12841 308 aa14.98□□□□□ -0.01
IFT43-210ENST00000555370 ZNF827Q17R98 1081 aa14.98□□□□□ -0.01
IFT43-210ENST00000555370 IL17REQ8NFR9 667 aa14.98□□□□□ -0.01
IFT43-210ENST00000555370 THRAP3Q9Y2W1 955 aaKnown RBP14.98□□□□□ -0.01
IFT43-210ENST00000555370 SBF2Q86WG5 1849 aa14.98□□□□□ -0.01
IFT43-210ENST00000555370 C16orf71Q8IYS4 520 aaPredicted RBP14.97□□□□□ -0.01
IFT43-210ENST00000555370 BABAM1Q9NWV8 329 aa14.97□□□□□ -0.01
IFT43-210ENST00000555370 TOGARAM1Q9Y4F4 1720 aa14.97□□□□□ -0.01
IFT43-210ENST00000555370 KDM6AO15550 1401 aaPredicted RBP14.96□□□□□ -0.01
IFT43-210ENST00000555370 RNMTO43148 476 aaKnown RBP14.96□□□□□ -0.01
IFT43-210ENST00000555370 IRX6P78412 446 aaPredicted RBP14.96□□□□□ -0.01
IFT43-210ENST00000555370 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.96□□□□□ -0.01
IFT43-210ENST00000555370 ITGB4P16144 1822 aa14.96□□□□□ -0.01
IFT43-210ENST00000555370 PCDH11XQ9BZA7 1347 aa14.95□□□□□ -0.02
IFT43-210ENST00000555370 PCDH11YQ9BZA8 1340 aa14.95□□□□□ -0.02
IFT43-210ENST00000555370 PHKG2P15735 406 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms