RNA–Protein interactions for RNA: ENST00000555305.5

IFT43-209, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,765 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-209ENST00000555305 KDM3BQ7LBC6 1761 aa18.27■□□□□ 0.51
IFT43-209ENST00000555305 RGPD5Q99666 1765 aa18.27■□□□□ 0.51
IFT43-209ENST00000555305 WDR17Q8IZU2 1322 aa18.26■□□□□ 0.51
IFT43-209ENST00000555305 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
IFT43-209ENST00000555305 MPRIPQ6WCQ1 1025 aa18.26■□□□□ 0.51
IFT43-209ENST00000555305 IFNL2Q8IZJ0 200 aa18.26■□□□□ 0.51
IFT43-209ENST00000555305 CACNA1FO60840 1977 aa18.26■□□□□ 0.51
IFT43-209ENST00000555305 PXDNLA1KZ92 1463 aa18.25■□□□□ 0.51
IFT43-209ENST00000555305 RPAP2Q8IXW5 612 aaPredicted RBP18.25■□□□□ 0.51
IFT43-209ENST00000555305 FLIIQ13045 1269 aa18.25■□□□□ 0.51
IFT43-209ENST00000555305 CHRNA2Q15822 529 aa18.25■□□□□ 0.51
IFT43-209ENST00000555305 DCAF5Q96JK2 942 aa18.24■□□□□ 0.51
IFT43-209ENST00000555305 PHKG2P15735 406 aa18.23■□□□□ 0.51
IFT43-209ENST00000555305 NUCB1Q02818 461 aa18.22■□□□□ 0.51
IFT43-209ENST00000555305 FKBP5Q13451 457 aaPredicted RBP18.22■□□□□ 0.51
IFT43-209ENST00000555305 C8orf34Q49A92 452 aa18.22■□□□□ 0.51
IFT43-209ENST00000555305 MEGF6O75095 1541 aa18.21■□□□□ 0.51
IFT43-209ENST00000555305 COL5A2P05997 1499 aaPredicted RBP18.21■□□□□ 0.51
IFT43-209ENST00000555305 PKD1L3Q7Z443 1732 aa18.21■□□□□ 0.51
IFT43-209ENST00000555305 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
IFT43-209ENST00000555305 SKAP1Q86WV1 359 aa18.21■□□□□ 0.51
IFT43-209ENST00000555305 ABCA3Q99758 1704 aa18.21■□□□□ 0.5
IFT43-209ENST00000555305 HMMRO75330 724 aa18.2■□□□□ 0.5
IFT43-209ENST00000555305 GNAI3P08754 354 aa18.2■□□□□ 0.5
IFT43-209ENST00000555305 CARD10Q9BWT7 1032 aa18.2■□□□□ 0.5
IFT43-209ENST00000555305 SLC52A2Q9HAB3 445 aa18.2■□□□□ 0.5
IFT43-209ENST00000555305 DBF4Q9UBU7 674 aaPredicted RBP18.2■□□□□ 0.5
IFT43-209ENST00000555305 TOM1L2Q6ZVM7 507 aa18.19■□□□□ 0.5
IFT43-209ENST00000555305 ANKRD44Q8N8A2 993 aa18.19■□□□□ 0.5
IFT43-209ENST00000555305 PARP4Q9UKK3 1724 aaKnown RBP18.19■□□□□ 0.5
IFT43-209ENST00000555305 AHDC1Q5TGY3 1603 aaPredicted RBP18.19■□□□□ 0.5
IFT43-209ENST00000555305 MRC1P22897 1456 aa18.19■□□□□ 0.5
IFT43-209ENST00000555305 PCDH11XQ9BZA7 1347 aa18.19■□□□□ 0.5
IFT43-209ENST00000555305 PCDH11YQ9BZA8 1340 aa18.19■□□□□ 0.5
IFT43-209ENST00000555305 G2E3Q7L622 706 aa18.19■□□□□ 0.5
IFT43-209ENST00000555305 CHD1LQ86WJ1 897 aa18.19■□□□□ 0.5
IFT43-209ENST00000555305 SIPA1L3O60292 1781 aaPredicted RBP18.18■□□□□ 0.5
IFT43-209ENST00000555305 GIGYF1O75420 1035 aaPredicted RBP18.17■□□□□ 0.5
IFT43-209ENST00000555305 SLC4A10Q6U841 1118 aa18.17■□□□□ 0.5
IFT43-209ENST00000555305 IPO9Q96P70 1041 aaKnown RBP18.17■□□□□ 0.5
IFT43-209ENST00000555305 ZBTB47Q9UFB7 747 aaPredicted RBP18.17■□□□□ 0.5
IFT43-209ENST00000555305 KDM6AO15550 1401 aaPredicted RBP18.17■□□□□ 0.5
IFT43-209ENST00000555305 DDRGK1Q96HY6 314 aa18.17■□□□□ 0.5
IFT43-209ENST00000555305 SCN11AQ9UI33 1791 aa18.16■□□□□ 0.5
IFT43-209ENST00000555305 GNAI2P04899 355 aa18.16■□□□□ 0.5
IFT43-209ENST00000555305 EVA1CP58658 441 aa18.16■□□□□ 0.5
IFT43-209ENST00000555305 ZNF790Q6PG37 636 aa18.16■□□□□ 0.5
IFT43-209ENST00000555305 IL2RBP14784 551 aa18.15■□□□□ 0.5
IFT43-209ENST00000555305 EIF2S2P20042 333 aaKnown RBP18.15■□□□□ 0.5
IFT43-209ENST00000555305 ZCRB1Q8TBF4 217 aaKnown RBP18.15■□□□□ 0.5
IFT43-209ENST00000555305 DCTPP1Q9H773 170 aa18.15■□□□□ 0.5
IFT43-209ENST00000555305 C1orf115Q9H7X2 142 aa18.15■□□□□ 0.5
IFT43-209ENST00000555305 HYPKQ9NX55 129 aa18.15■□□□□ 0.5
IFT43-209ENST00000555305 HDAC5Q9UQL6 1122 aa18.15■□□□□ 0.5
IFT43-209ENST00000555305 ATP10DQ9P241 1426 aa18.15■□□□□ 0.5
IFT43-209ENST00000555305 LTBP4Q8N2S1 1624 aa18.15■□□□□ 0.5
IFT43-209ENST00000555305 N4BP2Q86UW6 1770 aaPredicted RBP18.15■□□□□ 0.5
IFT43-209ENST00000555305 CEP85Q6P2H3 762 aa18.14■□□□□ 0.5
IFT43-209ENST00000555305 SIRT2Q8IXJ6 389 aa18.14■□□□□ 0.5
IFT43-209ENST00000555305 UPF2Q9HAU5 1272 aaKnown RBP18.14■□□□□ 0.5
IFT43-209ENST00000555305 VIRMAQ69YN4 1812 aaKnown RBP18.14■□□□□ 0.49
IFT43-209ENST00000555305 F6X3S4 739 aa18.14■□□□□ 0.49
IFT43-209ENST00000555305 EIF5BO60841 1220 aaKnown RBP18.14■□□□□ 0.49
IFT43-209ENST00000555305 TTC5Q8N0Z6 440 aa18.14■□□□□ 0.49
IFT43-209ENST00000555305 MEIS3Q99687 375 aa18.14■□□□□ 0.49
IFT43-209ENST00000555305 ROBO1Q9Y6N7 1651 aa18.13■□□□□ 0.49
IFT43-209ENST00000555305 COL22A1Q8NFW1 1626 aaPredicted RBP18.13■□□□□ 0.49
IFT43-209ENST00000555305 CYP27B1O15528 508 aa18.13■□□□□ 0.49
IFT43-209ENST00000555305 ANKRD45Q5TZF3 282 aa18.13■□□□□ 0.49
IFT43-209ENST00000555305 NECTIN2Q92692 538 aa18.13■□□□□ 0.49
IFT43-209ENST00000555305 CHPF2Q9P2E5 772 aa18.13■□□□□ 0.49
IFT43-209ENST00000555305 ERVV-2B6SEH9 535 aa18.12■□□□□ 0.49
IFT43-209ENST00000555305 KCNQ3O43525 872 aa18.12■□□□□ 0.49
IFT43-209ENST00000555305 DDX58O95786 925 aaKnown RBP18.12■□□□□ 0.49
IFT43-209ENST00000555305 CABP4P57796 275 aa18.12■□□□□ 0.49
IFT43-209ENST00000555305 NKX1-1Q15270 411 aaPredicted RBP18.12■□□□□ 0.49
IFT43-209ENST00000555305 NFATC2IPQ8NCF5 419 aa18.12■□□□□ 0.49
IFT43-209ENST00000555305 SRCIN1Q9C0H9 1055 aa18.12■□□□□ 0.49
IFT43-209ENST00000555305 DNAAF4Q8WXU2 420 aa18.11■□□□□ 0.49
IFT43-209ENST00000555305 COL14A1Q05707 1796 aaKnown RBP18.11■□□□□ 0.49
IFT43-209ENST00000555305 IBTKQ9P2D0 1353 aaPredicted RBP18.1■□□□□ 0.49
IFT43-209ENST00000555305 FMNL2Q96PY5 1086 aa18.1■□□□□ 0.49
IFT43-209ENST00000555305 DDX21Q9NR30 783 aaKnown RBP eCLIP18.1■□□□□ 0.49
IFT43-209ENST00000555305 SNRPA1P09661 255 aaKnown RBP18.09■□□□□ 0.49
IFT43-209ENST00000555305 BMP2KLQ5H9B9 411 aa18.09■□□□□ 0.49
IFT43-209ENST00000555305 ERICH6Q7L0X2 663 aa18.09■□□□□ 0.49
IFT43-209ENST00000555305 LNPKQ9C0E8 428 aa18.09■□□□□ 0.49
IFT43-209ENST00000555305 PHAXQ9H814 394 aaKnown RBP18.09■□□□□ 0.49
IFT43-209ENST00000555305 UBTFL1P0CB47 393 aaPredicted RBP18.09■□□□□ 0.49
IFT43-209ENST00000555305 NPM2Q86SE8 214 aaKnown RBP18.09■□□□□ 0.49
IFT43-209ENST00000555305 ALDH1L1O75891 902 aa18.08■□□□□ 0.48
IFT43-209ENST00000555305 STRN4Q9NRL3 753 aa18.08■□□□□ 0.48
IFT43-209ENST00000555305 LARP1Q6PKG0 1096 aaKnown RBP18.07■□□□□ 0.48
IFT43-209ENST00000555305 KSR2Q6VAB6 950 aa18.07■□□□□ 0.48
IFT43-209ENST00000555305 ERBB4Q15303 1308 aa18.07■□□□□ 0.48
IFT43-209ENST00000555305 PI4KAP2A4QPH2 592 aa18.07■□□□□ 0.48
IFT43-209ENST00000555305 TOM1O60784 492 aa18.07■□□□□ 0.48
IFT43-209ENST00000555305 PI4KAP1Q8N8J0 262 aa18.07■□□□□ 0.48
IFT43-209ENST00000555305 ATP8B2P98198 1209 aa18.06■□□□□ 0.48
IFT43-209ENST00000555305 BEND3Q5T5X7 828 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms