RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 DCTPP1Q9H773 170 aa18.44■□□□□ 0.54
XRCC3-211ENST00000555055 PRAMEF22A3QJZ6 481 aa18.44■□□□□ 0.54
XRCC3-211ENST00000555055 EXOC6BQ9Y2D4 811 aa18.44■□□□□ 0.54
XRCC3-211ENST00000555055 CCDC30Q5VVM6 783 aa18.43■□□□□ 0.54
XRCC3-211ENST00000555055 PLEKHM2Q8IWE5 1019 aa18.43■□□□□ 0.54
XRCC3-211ENST00000555055 TBC1D9Q6ZT07 1266 aa18.43■□□□□ 0.54
XRCC3-211ENST00000555055 PXDNQ92626 1479 aa18.43■□□□□ 0.54
XRCC3-211ENST00000555055 CHRNA2Q15822 529 aa18.42■□□□□ 0.54
XRCC3-211ENST00000555055 BMP2KLQ5H9B9 411 aa18.42■□□□□ 0.54
XRCC3-211ENST00000555055 C19orf44Q9H6X5 657 aa18.42■□□□□ 0.54
XRCC3-211ENST00000555055 TMEM94Q12767 1356 aa18.42■□□□□ 0.54
XRCC3-211ENST00000555055 KIF24Q5T7B8 1368 aa18.42■□□□□ 0.54
XRCC3-211ENST00000555055 HTATSF1O43719 755 aaKnown RBP18.41■□□□□ 0.54
XRCC3-211ENST00000555055 C1orf167Q5SNV9 1468 aa18.41■□□□□ 0.54
XRCC3-211ENST00000555055 PNMA6EA0A0J9YXQ4 647 aa18.41■□□□□ 0.54
XRCC3-211ENST00000555055 CHPF2Q9P2E5 772 aa18.41■□□□□ 0.54
XRCC3-211ENST00000555055 ATF3P18847 181 aa18.4■□□□□ 0.54
XRCC3-211ENST00000555055 TEFQ10587 303 aa18.4■□□□□ 0.54
XRCC3-211ENST00000555055 BTBD11A6QL63 1104 aa18.4■□□□□ 0.54
XRCC3-211ENST00000555055 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.54
XRCC3-211ENST00000555055 EIF4A1P60842 406 aaKnown RBP18.39■□□□□ 0.53
XRCC3-211ENST00000555055 RPAP2Q8IXW5 612 aaPredicted RBP18.38■□□□□ 0.53
XRCC3-211ENST00000555055 LRRFIP2Q9Y608 721 aaKnown RBP18.38■□□□□ 0.53
XRCC3-211ENST00000555055 DNAJC5Q9H3Z4 198 aa18.38■□□□□ 0.53
XRCC3-211ENST00000555055 NLRP2Q9NX02 1062 aa18.38■□□□□ 0.53
XRCC3-211ENST00000555055 LRRC37A3O60309 1634 aa18.38■□□□□ 0.53
XRCC3-211ENST00000555055 EIF5BO60841 1220 aaKnown RBP18.37■□□□□ 0.53
XRCC3-211ENST00000555055 CCT4P50991 539 aaKnown RBP18.37■□□□□ 0.53
XRCC3-211ENST00000555055 CEMIPQ8WUJ3 1361 aa18.37■□□□□ 0.53
XRCC3-211ENST00000555055 FSD2A1L4K1 749 aa18.37■□□□□ 0.53
XRCC3-211ENST00000555055 PLEKHO1Q53GL0 409 aaPredicted RBP18.37■□□□□ 0.53
XRCC3-211ENST00000555055 C1orf141Q5JVX7 400 aa18.37■□□□□ 0.53
XRCC3-211ENST00000555055 FOXD4L1Q9NU39 408 aa18.37■□□□□ 0.53
XRCC3-211ENST00000555055 USP54Q70EL1 1684 aa18.36■□□□□ 0.53
XRCC3-211ENST00000555055 GNAI2P04899 355 aa18.36■□□□□ 0.53
XRCC3-211ENST00000555055 SLC39A6Q13433 755 aa18.36■□□□□ 0.53
XRCC3-211ENST00000555055 PROSER3Q2NL68 480 aa18.36■□□□□ 0.53
XRCC3-211ENST00000555055 RGPD5Q99666 1765 aa18.36■□□□□ 0.53
XRCC3-211ENST00000555055 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
XRCC3-211ENST00000555055 CD2BP2O95400 341 aaKnown RBP18.35■□□□□ 0.53
XRCC3-211ENST00000555055 PI4KAP2A4QPH2 592 aa18.35■□□□□ 0.53
XRCC3-211ENST00000555055 RNMTO43148 476 aaKnown RBP18.35■□□□□ 0.53
XRCC3-211ENST00000555055 TTC22Q5TAA0 569 aa18.35■□□□□ 0.53
XRCC3-211ENST00000555055 PI4KAP1Q8N8J0 262 aa18.35■□□□□ 0.53
XRCC3-211ENST00000555055 USP44Q9H0E7 712 aa18.35■□□□□ 0.53
XRCC3-211ENST00000555055 FAM208AQ9UK61 1670 aaKnown RBP18.34■□□□□ 0.53
XRCC3-211ENST00000555055 CSB-PGBD3P0DP91 1061 aa18.34■□□□□ 0.53
XRCC3-211ENST00000555055 ERBB3P21860 1342 aa18.33■□□□□ 0.53
XRCC3-211ENST00000555055 STRCP1A6NGW2 1772 aa18.33■□□□□ 0.53
XRCC3-211ENST00000555055 NBPF7P0C2Y1 421 aaPredicted RBP18.33■□□□□ 0.52
XRCC3-211ENST00000555055 SDSP20132 328 aa18.33■□□□□ 0.52
XRCC3-211ENST00000555055 PIP4K2AP48426 406 aaPredicted RBP18.33■□□□□ 0.52
XRCC3-211ENST00000555055 KIF2CQ99661 725 aa18.33■□□□□ 0.52
XRCC3-211ENST00000555055 IL1RAPL2Q9NP60 686 aa18.32■□□□□ 0.52
XRCC3-211ENST00000555055 RRAGDQ9NQL2 400 aaPredicted RBP18.32■□□□□ 0.52
XRCC3-211ENST00000555055 ISY1Q9ULR0 285 aaKnown RBP18.32■□□□□ 0.52
XRCC3-211ENST00000555055 MST1RQ04912 1400 aa18.31■□□□□ 0.52
XRCC3-211ENST00000555055 CDC45O75419 566 aa18.31■□□□□ 0.52
XRCC3-211ENST00000555055 AIMP1Q12904 312 aaKnown RBP18.31■□□□□ 0.52
XRCC3-211ENST00000555055 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
XRCC3-211ENST00000555055 GOLGA6L3A6NEY3 463 aa18.3■□□□□ 0.52
XRCC3-211ENST00000555055 HMMRO75330 724 aa18.3■□□□□ 0.52
XRCC3-211ENST00000555055 UBTFL1P0CB47 393 aaPredicted RBP18.3■□□□□ 0.52
XRCC3-211ENST00000555055 TRPM3Q9HCF6 1732 aaPredicted RBP18.3■□□□□ 0.52
XRCC3-211ENST00000555055 RBM25P49756 843 aaKnown RBP18.3■□□□□ 0.52
XRCC3-211ENST00000555055 SLIT3O75094 1523 aa18.29■□□□□ 0.52
XRCC3-211ENST00000555055 CLCN1P35523 988 aa18.29■□□□□ 0.52
XRCC3-211ENST00000555055 MCM4P33991 863 aa18.29■□□□□ 0.52
XRCC3-211ENST00000555055 AMOTQ4VCS5 1084 aa18.29■□□□□ 0.52
XRCC3-211ENST00000555055 HSCBQ8IWL3 235 aa18.28■□□□□ 0.52
XRCC3-211ENST00000555055 RAPGEF4Q8WZA2 1011 aa18.28■□□□□ 0.52
XRCC3-211ENST00000555055 GNAI3P08754 354 aa18.28■□□□□ 0.52
XRCC3-211ENST00000555055 CWF19L2Q2TBE0 894 aaKnown RBP18.28■□□□□ 0.52
XRCC3-211ENST00000555055 NFATC2IPQ8NCF5 419 aa18.28■□□□□ 0.52
XRCC3-211ENST00000555055 SRCIN1Q9C0H9 1055 aa18.28■□□□□ 0.52
XRCC3-211ENST00000555055 GIGYF1O75420 1035 aaPredicted RBP18.27■□□□□ 0.51
XRCC3-211ENST00000555055 MAP4K4O95819 1239 aaPredicted RBP18.27■□□□□ 0.51
XRCC3-211ENST00000555055 XRCC6P12956 609 aaKnown RBP eCLIP18.27■□□□□ 0.51
XRCC3-211ENST00000555055 PDE1AP54750 535 aa18.27■□□□□ 0.51
XRCC3-211ENST00000555055 ATP8B2P98198 1209 aa18.27■□□□□ 0.51
XRCC3-211ENST00000555055 PPP1R42Q7Z4L9 355 aa18.27■□□□□ 0.51
XRCC3-211ENST00000555055 NUTM1Q86Y26 1132 aa18.27■□□□□ 0.51
XRCC3-211ENST00000555055 CHMP5Q9NZZ3 219 aa18.27■□□□□ 0.51
XRCC3-211ENST00000555055 MYL6BP14649 208 aa18.26■□□□□ 0.51
XRCC3-211ENST00000555055 DNAAF4Q8WXU2 420 aa18.26■□□□□ 0.51
XRCC3-211ENST00000555055 LRRCC1Q9C099 1032 aa18.25■□□□□ 0.51
XRCC3-211ENST00000555055 BABAM1Q9NWV8 329 aa18.25■□□□□ 0.51
XRCC3-211ENST00000555055 MAP3K2Q9Y2U5 619 aa18.25■□□□□ 0.51
XRCC3-211ENST00000555055 ADCY9O60503 1353 aa18.25■□□□□ 0.51
XRCC3-211ENST00000555055 SRGAP3O43295 1099 aa18.25■□□□□ 0.51
XRCC3-211ENST00000555055 BEND3Q5T5X7 828 aa18.25■□□□□ 0.51
XRCC3-211ENST00000555055 SURF6O75683 361 aaKnown RBP18.24■□□□□ 0.51
XRCC3-211ENST00000555055 MRE11P49959 708 aa18.24■□□□□ 0.51
XRCC3-211ENST00000555055 RILPL2Q969X0 211 aa18.24■□□□□ 0.51
XRCC3-211ENST00000555055 NCOA3Q9Y6Q9 1424 aa18.24■□□□□ 0.51
XRCC3-211ENST00000555055 CADPS2Q86UW7 1296 aa18.24■□□□□ 0.51
XRCC3-211ENST00000555055 UNC5CLQ8IV45 518 aa18.24■□□□□ 0.51
XRCC3-211ENST00000555055 MEGF6O75095 1541 aa18.24■□□□□ 0.51
XRCC3-211ENST00000555055 ZNF335Q9H4Z2 1342 aaPredicted RBP18.23■□□□□ 0.51
XRCC3-211ENST00000555055 TRIM6-TRIM34B2RNG4 842 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms