RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 OSBPL3Q9H4L5 887 aa8.92□□□□□ -0.98
PSEN1-211ENST00000554995 ESF1Q9H501 851 aaKnown RBP8.92□□□□□ -0.98
PSEN1-211ENST00000554995 IGFBP4P22692 258 aa8.91□□□□□ -0.98
PSEN1-211ENST00000554995 SCNN1DP51172 638 aa8.91□□□□□ -0.98
PSEN1-211ENST00000554995 FKBP4Q02790 459 aaKnown RBP eCLIP8.91□□□□□ -0.98
PSEN1-211ENST00000554995 GIPC2Q8TF65 315 aa8.91□□□□□ -0.98
PSEN1-211ENST00000554995 MRRFQ96E11 262 aaKnown RBP8.91□□□□□ -0.98
PSEN1-211ENST00000554995 TMPRSS4Q9NRS4 437 aa8.91□□□□□ -0.98
PSEN1-211ENST00000554995 KIAA1522Q9P206 1035 aaPredicted RBP8.91□□□□□ -0.98
PSEN1-211ENST00000554995 WFS1O76024 890 aa8.9□□□□□ -0.98
PSEN1-211ENST00000554995 STAU1O95793 577 aaKnown RBP8.9□□□□□ -0.98
PSEN1-211ENST00000554995 FSHRP23945 695 aa8.9□□□□□ -0.98
PSEN1-211ENST00000554995 MAPK1P28482 360 aa8.9□□□□□ -0.98
PSEN1-211ENST00000554995 GDF10P55107 478 aa8.9□□□□□ -0.98
PSEN1-211ENST00000554995 SF3B2Q13435 895 aaKnown RBP8.9□□□□□ -0.98
PSEN1-211ENST00000554995 ARID5BQ14865 1188 aa8.9□□□□□ -0.98
PSEN1-211ENST00000554995 TNS4Q8IZW8 715 aa8.9□□□□□ -0.98
PSEN1-211ENST00000554995 EHBP1Q8NDI1 1231 aa8.9□□□□□ -0.98
PSEN1-211ENST00000554995 COL26A1Q96A83 441 aa8.9□□□□□ -0.98
PSEN1-211ENST00000554995 CYLDQ9NQC7 956 aa8.9□□□□□ -0.98
PSEN1-211ENST00000554995 WASLO00401 505 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-211ENST00000554995 FOXO3O43524 673 aa8.89□□□□□ -0.99
PSEN1-211ENST00000554995 PRR20EP86478 221 aa8.89□□□□□ -0.99
PSEN1-211ENST00000554995 PRR20CP86479 221 aa8.89□□□□□ -0.99
PSEN1-211ENST00000554995 PRR20DP86480 221 aa8.89□□□□□ -0.99
PSEN1-211ENST00000554995 PRR20BP86481 221 aa8.89□□□□□ -0.99
PSEN1-211ENST00000554995 PRR20AP86496 221 aa8.89□□□□□ -0.99
PSEN1-211ENST00000554995 ARHGAP4P98171 946 aa8.89□□□□□ -0.99
PSEN1-211ENST00000554995 NAA30Q147X3 362 aaPredicted RBP8.89□□□□□ -0.99
PSEN1-211ENST00000554995 SCG3Q8WXD2 468 aaKnown RBP8.89□□□□□ -0.99
PSEN1-211ENST00000554995 CDK15Q96Q40 435 aa8.89□□□□□ -0.99
PSEN1-211ENST00000554995 BACH1O14867 736 aa8.88□□□□□ -0.99
PSEN1-211ENST00000554995 RPIAP49247 311 aa8.88□□□□□ -0.99
PSEN1-211ENST00000554995 DHX9Q08211 1270 aaKnown RBP8.88□□□□□ -0.99
PSEN1-211ENST00000554995 RC3H1Q5TC82 1133 aaKnown RBP8.88□□□□□ -0.99
PSEN1-211ENST00000554995 HELQQ8TDG4 1101 aa8.88□□□□□ -0.99
PSEN1-211ENST00000554995 DCTN4Q9UJW0 460 aa8.88□□□□□ -0.99
PSEN1-211ENST00000554995 INHAP05111 366 aa8.87□□□□□ -0.99
PSEN1-211ENST00000554995 SLC19A1P41440 591 aa8.87□□□□□ -0.99
PSEN1-211ENST00000554995 GRM5P41594 1212 aa8.87□□□□□ -0.99
PSEN1-211ENST00000554995 INSM1Q01101 510 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-211ENST00000554995 ZNF784Q8NCA9 323 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-211ENST00000554995 EMID1Q96A84 441 aaPredicted RBP8.87□□□□□ -0.99
PSEN1-211ENST00000554995 ASB16Q96NS5 453 aa8.87□□□□□ -0.99
PSEN1-211ENST00000554995 IGSF5Q9NSI5 407 aa8.87□□□□□ -0.99
PSEN1-211ENST00000554995 SERTAD1Q9UHV2 236 aa8.87□□□□□ -0.99
PSEN1-211ENST00000554995 TLL2Q9Y6L7 1015 aa8.87□□□□□ -0.99
PSEN1-211ENST00000554995 ATAD2Q6PL18 1390 aa8.86□□□□□ -0.99
PSEN1-211ENST00000554995 IGSF3O75054 1194 aa8.86□□□□□ -0.99
PSEN1-211ENST00000554995 EPHA4P54764 986 aa8.86□□□□□ -0.99
PSEN1-211ENST00000554995 TRIM52Q96A61 297 aa8.86□□□□□ -0.99
PSEN1-211ENST00000554995 TSPAN10Q9H1Z9 355 aaPredicted RBP8.86□□□□□ -0.99
PSEN1-211ENST00000554995 ETNK1Q9HBU6 452 aa8.86□□□□□ -0.99
PSEN1-211ENST00000554995 LILRA1O75019 489 aa8.85□□□□□ -0.99
PSEN1-211ENST00000554995 NFX1Q12986 1120 aaKnown RBP8.85□□□□□ -0.99
PSEN1-211ENST00000554995 ZNF326Q5BKZ1 582 aaKnown RBP8.85□□□□□ -0.99
PSEN1-211ENST00000554995 ZSCAN29Q8IWY8 852 aaPredicted RBP8.85□□□□□ -0.99
PSEN1-211ENST00000554995 NPR3P17342 541 aa8.84□□□□□ -0.99
PSEN1-211ENST00000554995 PPP1R26Q5T8A7 1209 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-211ENST00000554995 CYP2U1Q7Z449 544 aa8.84□□□□□ -0.99
PSEN1-211ENST00000554995 FBXO33Q7Z6M2 555 aa8.84□□□□□ -0.99
PSEN1-211ENST00000554995 ZNF598Q86UK7 904 aaKnown RBP8.84□□□□□ -0.99
PSEN1-211ENST00000554995 CCDC116Q8IYX3 515 aa8.84□□□□□ -0.99
PSEN1-211ENST00000554995 MPNDQ8N594 471 aa8.84□□□□□ -0.99
PSEN1-211ENST00000554995 CHMP7Q8WUX9 453 aaPredicted RBP8.84□□□□□ -0.99
PSEN1-211ENST00000554995 VTI1AQ96AJ9 217 aa8.84□□□□□ -0.99
PSEN1-211ENST00000554995 SLC4A9Q96Q91 983 aa8.84□□□□□ -0.99
PSEN1-211ENST00000554995 AAASQ9NRG9 546 aa8.84□□□□□ -0.99
PSEN1-211ENST00000554995 ST8SIA5O15466 376 aa8.83□□□□□ -1
PSEN1-211ENST00000554995 CD2BP2O95400 341 aaKnown RBP8.83□□□□□ -1
PSEN1-211ENST00000554995 SPRYD7Q5W111 196 aa8.83□□□□□ -1
PSEN1-211ENST00000554995 A0A1W2PRU2 124 aa8.82□□□□□ -1
PSEN1-211ENST00000554995 SIAH2O43255 324 aa8.82□□□□□ -1
PSEN1-211ENST00000554995 PPP1R12BO60237 982 aaPredicted RBP8.82□□□□□ -1
PSEN1-211ENST00000554995 FAM13AO94988 1023 aa8.82□□□□□ -1
PSEN1-211ENST00000554995 ADH1CP00326 375 aa8.82□□□□□ -1
PSEN1-211ENST00000554995 GNRH1P01148 92 aa8.82□□□□□ -1
PSEN1-211ENST00000554995 MPSTP25325 297 aa8.82□□□□□ -1
PSEN1-211ENST00000554995 TAGLNQ01995 201 aaKnown RBP8.82□□□□□ -1
PSEN1-211ENST00000554995 RGL4Q8IZJ4 473 aa8.82□□□□□ -1
PSEN1-211ENST00000554995 SAP130Q9H0E3 1048 aa8.82□□□□□ -1
PSEN1-211ENST00000554995 FAM187AA6NFU0 413 aa8.81□□□□□ -1
PSEN1-211ENST00000554995 ADD1P35611 737 aaKnown RBP8.81□□□□□ -1
PSEN1-211ENST00000554995 FOXK2Q01167 660 aa8.81□□□□□ -1
PSEN1-211ENST00000554995 ESCO1Q5FWF5 840 aa8.81□□□□□ -1
PSEN1-211ENST00000554995 TBCELQ5QJ74 424 aa8.81□□□□□ -1
PSEN1-211ENST00000554995 SLC9A9Q8IVB4 645 aa8.81□□□□□ -1
PSEN1-211ENST00000554995 SCHIP1Q9P0W5 487 aaPredicted RBP8.81□□□□□ -1
PSEN1-211ENST00000554995 A6NJY4 79 aa8.8□□□□□ -1
PSEN1-211ENST00000554995 NR5A1Q13285 461 aa8.8□□□□□ -1
PSEN1-211ENST00000554995 COL19A1Q14993 1142 aa8.8□□□□□ -1
PSEN1-211ENST00000554995 C16orf46Q6P387 395 aa8.8□□□□□ -1
PSEN1-211ENST00000554995 LIAT1Q6ZQX7 453 aa8.8□□□□□ -1
PSEN1-211ENST00000554995 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.8□□□□□ -1
PSEN1-211ENST00000554995 RAB6BQ9NRW1 208 aa8.8□□□□□ -1
PSEN1-211ENST00000554995 NR3C2P08235 984 aa8.79□□□□□ -1
PSEN1-211ENST00000554995 SMTNP53814 917 aa8.79□□□□□ -1
PSEN1-211ENST00000554995 MTFR1Q15390 333 aa8.79□□□□□ -1
PSEN1-211ENST00000554995 LCE2CQ5TA81 110 aa8.79□□□□□ -1
PSEN1-211ENST00000554995 STAG2Q8N3U4 1231 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms