RNA–Protein interactions for RNA: ENST00000554960.1

SIPA1L1-208, Transcript of signal induced proliferation associated 1 like 1, human

TSL 5

Gene SIPA1L1, Length 1,136 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L1-208	ENST00000554960	CGNL1	Q0VF96	1302 aa		13.78	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.78	□□□□□ -0.2
SIPA1L1-208	ENST00000554960	ZBTB7C	A1YPR0	619 aa		13.77	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	DDX10	Q13206	875 aa	Known RBP	13.77	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	CNGB1	Q14028	1251 aa	Predicted RBP	13.77	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	SHPRH	Q149N8	1683 aa		13.77	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	MON2	Q7Z3U7	1717 aa		13.77	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	SSH2	Q76I76	1423 aa		13.76	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	GGNBP2	Q9H3C7	697 aa		13.76	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	OSBP	P22059	807 aa		13.75	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	ALS2	Q96Q42	1657 aa		13.75	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	FYB1	O15117	783 aa		13.74	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	GC	P02774	474 aa		13.74	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	MLLT3	P42568	568 aa	Predicted RBP	13.74	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	ZC3H6	P61129	1189 aa	Known RBP	13.74	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	KCNH5	Q8NCM2	988 aa		13.74	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	NGLY1	Q96IV0	654 aa		13.73	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	C8orf37	Q96NL8	207 aa		13.73	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	NRK	Q7Z2Y5	1582 aa		13.73	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.72	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	BHMG1	C9JSJ3	638 aa	Predicted RBP	13.72	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	MORC1	Q86VD1	984 aa		13.72	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	NBPF3	Q9H094	633 aa		13.72	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	PIK3C2A	O00443	1686 aa		13.72	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	MED1	Q15648	1581 aa	Predicted RBP	13.71	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	TNNT2	P45379	298 aa	Predicted RBP	13.71	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	CC2D1B	Q5T0F9	858 aa	Known RBP	13.71	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	MRPL50	Q8N5N7	158 aa	Known RBP	13.71	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	KCTD12	Q96CX2	325 aa	Known RBP	13.71	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	PRDM11	Q9NQV5	511 aa		13.71	□□□□□ -0.21
SIPA1L1-208	ENST00000554960	USP31	Q70CQ4	1352 aa		13.71	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	USP19	O94966	1318 aa		13.7	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	RABGEF1	Q9UJ41	708 aa		13.7	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	CDHR5	Q9HBB8	845 aa		13.69	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	KIF20B	Q96Q89	1820 aa		13.69	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	GOLGA8CP	A6NN73	597 aa		13.68	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	PER1	O15534	1290 aa	Predicted RBP	13.68	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	CHRNA2	Q15822	529 aa		13.68	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	VSIG10	Q8N0Z9	540 aa		13.68	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	KIAA1468	Q9P260	1216 aa		13.68	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	NSD2	O96028	1365 aa		13.68	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	KIAA0232	Q92628	1395 aa		13.68	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	LRP6	O75581	1613 aa		13.68	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	FAM83G	A6ND36	823 aa		13.67	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	TRIM6-TRIM34	B2RNG4	842 aa		13.67	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	SEMA3E	O15041	775 aa		13.67	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	PPM1G	O15355	546 aa	Predicted RBP	13.67	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	AMPH	P49418	695 aa		13.67	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	EVA1C	P58658	441 aa		13.67	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	OVOS2	A0A0J9YW53	1432 aa		13.66	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	OVOS2	Q6IE36	1432 aa		13.66	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.66	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	AFF2	P51816	1311 aa		13.65	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	SLIT3	O75094	1523 aa		13.65	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	ABCA3	Q99758	1704 aa		13.65	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	FBLN1	P23142	703 aa		13.65	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	BTG4	Q9NY30	223 aa		13.65	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	USP21	Q9UK80	565 aa		13.65	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	CCDC9	Q9Y3X0	531 aa	Known RBP	13.65	□□□□□ -0.22
SIPA1L1-208	ENST00000554960	ONECUT3	O60422	494 aa	Predicted RBP	13.64	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	RRS1	Q15050	365 aa	Known RBP	13.64	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	ARHGEF25	Q86VW2	580 aa		13.64	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	STRN4	Q9NRL3	753 aa		13.64	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	CPD	O75976	1380 aa		13.63	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	CSB-PGBD3	P0DP91	1061 aa		13.63	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	ZNF772	Q68DY9	489 aa	Predicted RBP	13.63	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	MARF1	Q9Y4F3	1742 aa	Known RBP	13.63	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	CRYBG1	Q9Y4K1	1723 aa		13.63	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	WNT2B	Q93097	391 aa		13.62	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	CDCA7L	Q96GN5	454 aa		13.62	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	HCST	Q9UBK5	93 aa		13.62	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.62	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	TSKS	Q9UJT2	592 aa		13.62	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	USP54	Q70EL1	1684 aa		13.62	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	MAP3K19	Q56UN5	1328 aa		13.62	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	NPC1L1	Q9UHC9	1359 aa		13.61	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	COL14A1	Q05707	1796 aa	Known RBP	13.61	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	PRSS12	P56730	875 aa		13.61	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	UNC5CL	Q8IV45	518 aa		13.61	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	FNBP4	Q8N3X1	1017 aa	Predicted RBP	13.61	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	LTV1	Q96GA3	475 aa	Predicted RBP	13.61	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	QTRT2	Q9H974	415 aa	Known RBP	13.61	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	AATK	Q6ZMQ8	1374 aa		13.6	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	NFAT5	O94916	1531 aa		13.6	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	PACS2	Q86VP3	889 aa		13.6	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	IP6K1	Q92551	441 aa		13.6	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	ANKRD26	Q9UPS8	1709 aa		13.6	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	EMILIN1	Q9Y6C2	1016 aa		13.6	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	HOXC9	P31274	260 aa		13.59	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	POLK	Q9UBT6	870 aa		13.59	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	TRPC5	Q9UL62	973 aa	Predicted RBP	13.59	□□□□□ -0.23
SIPA1L1-208	ENST00000554960	TOM1L2	Q6ZVM7	507 aa		13.58	□□□□□ -0.24
SIPA1L1-208	ENST00000554960	LAPTM4B	Q86VI4	370 aa		13.58	□□□□□ -0.24
SIPA1L1-208	ENST00000554960	LTN1	O94822	1766 aa		13.58	□□□□□ -0.24
SIPA1L1-208	ENST00000554960	PLCH1	Q4KWH8	1693 aa		13.57	□□□□□ -0.24
SIPA1L1-208	ENST00000554960	ANP32C	O43423	234 aa		13.57	□□□□□ -0.24
SIPA1L1-208	ENST00000554960	MTHFS	P49914	203 aa		13.57	□□□□□ -0.24
SIPA1L1-208	ENST00000554960	PTPN5	P54829	565 aa		13.57	□□□□□ -0.24
SIPA1L1-208	ENST00000554960	RALBP1	Q15311	655 aa		13.57	□□□□□ -0.24
SIPA1L1-208	ENST00000554960	THSD4	Q6ZMP0	1018 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms