RNA–Protein interactions for RNA: ENST00000554943.5

PPP4R3A-206, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5 BASIC

Gene PPP4R3A, Length 3,369 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-206ENST00000554943 ELL2O00472 640 aaPredicted RBP15.73■□□□□ 0.11
PPP4R3A-206ENST00000554943 CDC45O75419 566 aa15.73■□□□□ 0.11
PPP4R3A-206ENST00000554943 CCT4P50991 539 aaKnown RBP15.73■□□□□ 0.11
PPP4R3A-206ENST00000554943 NUP188Q5SRE5 1749 aa15.72■□□□□ 0.11
PPP4R3A-206ENST00000554943 ABCA3Q99758 1704 aa15.72■□□□□ 0.11
PPP4R3A-206ENST00000554943 IL27Q8NEV9 243 aa15.72■□□□□ 0.11
PPP4R3A-206ENST00000554943 IP6K1Q92551 441 aa15.72■□□□□ 0.11
PPP4R3A-206ENST00000554943 STAP2Q9UGK3 403 aa15.72■□□□□ 0.11
PPP4R3A-206ENST00000554943 HOXB7P09629 217 aa15.72■□□□□ 0.11
PPP4R3A-206ENST00000554943 DAXXQ9UER7 740 aaPredicted RBP15.72■□□□□ 0.11
PPP4R3A-206ENST00000554943 GNAT3A8MTJ3 354 aa15.71■□□□□ 0.11
PPP4R3A-206ENST00000554943 AOX1Q06278 1338 aa15.71■□□□□ 0.11
PPP4R3A-206ENST00000554943 C16orf71Q8IYS4 520 aaPredicted RBP15.7■□□□□ 0.1
PPP4R3A-206ENST00000554943 NPHP4O75161 1426 aaPredicted RBP15.7■□□□□ 0.1
PPP4R3A-206ENST00000554943 POLA2Q14181 598 aa15.7■□□□□ 0.1
PPP4R3A-206ENST00000554943 OTUD7AQ8TE49 926 aaPredicted RBP15.7■□□□□ 0.1
PPP4R3A-206ENST00000554943 EIF5BO60841 1220 aaKnown RBP15.7■□□□□ 0.1
PPP4R3A-206ENST00000554943 SLC4A2P04920 1241 aa15.7■□□□□ 0.1
PPP4R3A-206ENST00000554943 ARFGEF2Q9Y6D5 1785 aa15.69■□□□□ 0.1
PPP4R3A-206ENST00000554943 USP42Q9H9J4 1324 aaKnown RBP15.69■□□□□ 0.1
PPP4R3A-206ENST00000554943 EPB41L2O43491 1005 aaKnown RBP15.68■□□□□ 0.1
PPP4R3A-206ENST00000554943 SDSP20132 328 aa15.68■□□□□ 0.1
PPP4R3A-206ENST00000554943 DCCP43146 1447 aa15.68■□□□□ 0.1
PPP4R3A-206ENST00000554943 SLKQ9H2G2 1235 aaPredicted RBP15.68■□□□□ 0.1
PPP4R3A-206ENST00000554943 ATP8B2P98198 1209 aa15.67■□□□□ 0.1
PPP4R3A-206ENST00000554943 TJP1Q07157 1748 aa15.67■□□□□ 0.1
PPP4R3A-206ENST00000554943 K7ELQ4 463 aaPredicted RBP15.67■□□□□ 0.1
PPP4R3A-206ENST00000554943 TSPYL4Q9UJ04 414 aa15.67■□□□□ 0.1
PPP4R3A-206ENST00000554943 FLIIQ13045 1269 aa15.66■□□□□ 0.1
PPP4R3A-206ENST00000554943 TAF7Q15545 349 aaPredicted RBP15.66■□□□□ 0.1
PPP4R3A-206ENST00000554943 SSH3Q8TE77 659 aa15.66■□□□□ 0.1
PPP4R3A-206ENST00000554943 MIS18AQ9NYP9 233 aa15.66■□□□□ 0.1
PPP4R3A-206ENST00000554943 ADCY9O60503 1353 aa15.65■□□□□ 0.1
PPP4R3A-206ENST00000554943 USP44Q9H0E7 712 aa15.65■□□□□ 0.1
PPP4R3A-206ENST00000554943 PHF8Q9UPP1 1060 aa15.65■□□□□ 0.1
PPP4R3A-206ENST00000554943 PDE1AP54750 535 aa15.65■□□□□ 0.1
PPP4R3A-206ENST00000554943 EIF4A1P60842 406 aaKnown RBP15.65■□□□□ 0.1
PPP4R3A-206ENST00000554943 ANO8Q9HCE9 1232 aaPredicted RBP15.65■□□□□ 0.1
PPP4R3A-206ENST00000554943 C1orf167Q5SNV9 1468 aa15.65■□□□□ 0.1
PPP4R3A-206ENST00000554943 HSCBQ8IWL3 235 aa15.64■□□□□ 0.09
PPP4R3A-206ENST00000554943 NGDNQ8NEJ9 315 aaKnown RBP15.64■□□□□ 0.09
PPP4R3A-206ENST00000554943 TNPO1Q92973 898 aaKnown RBP15.64■□□□□ 0.09
PPP4R3A-206ENST00000554943 CCDC30Q5VVM6 783 aa15.64■□□□□ 0.09
PPP4R3A-206ENST00000554943 UTYO14607 1347 aa15.64■□□□□ 0.09
PPP4R3A-206ENST00000554943 NLRP6P59044 892 aa15.64■□□□□ 0.09
PPP4R3A-206ENST00000554943 RABEP1Q15276 862 aa15.64■□□□□ 0.09
PPP4R3A-206ENST00000554943 NBPF6Q5VWK0 638 aa15.64■□□□□ 0.09
PPP4R3A-206ENST00000554943 NBPF4Q96M43 638 aa15.64■□□□□ 0.09
PPP4R3A-206ENST00000554943 MTX1Q13505 466 aa15.63■□□□□ 0.09
PPP4R3A-206ENST00000554943 ARHGEF25Q86VW2 580 aa15.63■□□□□ 0.09
PPP4R3A-206ENST00000554943 RBM42Q9BTD8 480 aaKnown RBP15.63■□□□□ 0.09
PPP4R3A-206ENST00000554943 BRPF3Q9ULD4 1205 aa15.63■□□□□ 0.09
PPP4R3A-206ENST00000554943 PNMA6EA0A0J9YXQ4 647 aa15.62■□□□□ 0.09
PPP4R3A-206ENST00000554943 NUTM2FA1L443 756 aa15.62■□□□□ 0.09
PPP4R3A-206ENST00000554943 AFDNP55196 1824 aaKnown RBP15.62■□□□□ 0.09
PPP4R3A-206ENST00000554943 DDX60Q8IY21 1712 aaKnown RBP15.62■□□□□ 0.09
PPP4R3A-206ENST00000554943 ISY1Q9ULR0 285 aaKnown RBP15.62■□□□□ 0.09
PPP4R3A-206ENST00000554943 GNAI2P04899 355 aa15.62■□□□□ 0.09
PPP4R3A-206ENST00000554943 AMPHP49418 695 aa15.62■□□□□ 0.09
PPP4R3A-206ENST00000554943 F6X3S4 739 aa15.61■□□□□ 0.09
PPP4R3A-206ENST00000554943 TMEM94Q12767 1356 aa15.61■□□□□ 0.09
PPP4R3A-206ENST00000554943 DDX11L8A8MPP1 907 aa15.6■□□□□ 0.09
PPP4R3A-206ENST00000554943 BEND3Q5T5X7 828 aa15.6■□□□□ 0.09
PPP4R3A-206ENST00000554943 KCNH5Q8NCM2 988 aa15.6■□□□□ 0.09
PPP4R3A-206ENST00000554943 RTF1Q92541 710 aaKnown RBP15.6■□□□□ 0.09
PPP4R3A-206ENST00000554943 COL15A1P39059 1388 aa15.6■□□□□ 0.09
PPP4R3A-206ENST00000554943 SMARCA5O60264 1052 aaPredicted RBP15.6■□□□□ 0.09
PPP4R3A-206ENST00000554943 KDM6AO15550 1401 aaPredicted RBP15.6■□□□□ 0.09
PPP4R3A-206ENST00000554943 GNAI3P08754 354 aa15.59■□□□□ 0.09
PPP4R3A-206ENST00000554943 ANKLE2Q86XL3 938 aa15.59■□□□□ 0.09
PPP4R3A-206ENST00000554943 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
PPP4R3A-206ENST00000554943 AKAP4Q5JQC9 854 aa15.59■□□□□ 0.09
PPP4R3A-206ENST00000554943 ABTB2Q8N961 1025 aa15.59■□□□□ 0.09
PPP4R3A-206ENST00000554943 SPRYD3Q8NCJ5 442 aa15.59■□□□□ 0.09
PPP4R3A-206ENST00000554943 TRAK2O60296 914 aa15.58■□□□□ 0.09
PPP4R3A-206ENST00000554943 HMMRO75330 724 aa15.58■□□□□ 0.08
PPP4R3A-206ENST00000554943 XRCC6P12956 609 aaKnown RBP eCLIP15.58■□□□□ 0.08
PPP4R3A-206ENST00000554943 PI4K2BQ8TCG2 481 aa15.58■□□□□ 0.08
PPP4R3A-206ENST00000554943 CUL4AQ13619 759 aa15.58■□□□□ 0.08
PPP4R3A-206ENST00000554943 ZDHHC9Q9Y397 364 aa15.58■□□□□ 0.08
PPP4R3A-206ENST00000554943 LRP10Q7Z4F1 713 aa15.57■□□□□ 0.08
PPP4R3A-206ENST00000554943 JCADQ9P266 1359 aa15.57■□□□□ 0.08
PPP4R3A-206ENST00000554943 SNRKQ9NRH2 765 aa15.56■□□□□ 0.08
PPP4R3A-206ENST00000554943 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.56■□□□□ 0.08
PPP4R3A-206ENST00000554943 TOGARAM1Q9Y4F4 1720 aa15.56■□□□□ 0.08
PPP4R3A-206ENST00000554943 ANAPC15P60006 121 aa15.56■□□□□ 0.08
PPP4R3A-206ENST00000554943 FAM43AQ8N2R8 423 aa15.56■□□□□ 0.08
PPP4R3A-206ENST00000554943 KCNB2Q92953 911 aa15.56■□□□□ 0.08
PPP4R3A-206ENST00000554943 LGR6Q9HBX8 967 aa15.56■□□□□ 0.08
PPP4R3A-206ENST00000554943 STRCQ7RTU9 1775 aa15.56■□□□□ 0.08
PPP4R3A-206ENST00000554943 ESYT1Q9BSJ8 1104 aa15.56■□□□□ 0.08
PPP4R3A-206ENST00000554943 SRCIN1Q9C0H9 1055 aa15.56■□□□□ 0.08
PPP4R3A-206ENST00000554943 PTMSP20962 102 aa15.55■□□□□ 0.08
PPP4R3A-206ENST00000554943 CHMLP26374 656 aa15.55■□□□□ 0.08
PPP4R3A-206ENST00000554943 ERC2O15083 957 aa15.55■□□□□ 0.08
PPP4R3A-206ENST00000554943 LRRCC1Q9C099 1032 aa15.55■□□□□ 0.08
PPP4R3A-206ENST00000554943 PHAXQ9H814 394 aaKnown RBP15.55■□□□□ 0.08
PPP4R3A-206ENST00000554943 RAB11FIP3O75154 756 aa15.54■□□□□ 0.08
PPP4R3A-206ENST00000554943 PDIA6Q15084 440 aa15.54■□□□□ 0.08
PPP4R3A-206ENST00000554943 L1TD1Q5T7N2 865 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms