RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 SLC16A10Q8TF71 515 aa6.17□□□□□ -1.42
SCFD1-213ENST00000554776 SLC4A9Q96Q91 983 aa6.17□□□□□ -1.42
SCFD1-213ENST00000554776 ZSCAN10Q96SZ4 725 aaPredicted RBP6.17□□□□□ -1.42
SCFD1-213ENST00000554776 MKRN1Q9UHC7 482 aaKnown RBP6.17□□□□□ -1.42
SCFD1-213ENST00000554776 RHOQP17081 205 aa6.16□□□□□ -1.42
SCFD1-213ENST00000554776 PSME1Q06323 249 aa6.16□□□□□ -1.42
SCFD1-213ENST00000554776 POU4F2Q12837 409 aa6.16□□□□□ -1.42
SCFD1-213ENST00000554776 TLR1Q15399 786 aa6.16□□□□□ -1.42
SCFD1-213ENST00000554776 WDR44Q5JSH3 913 aa6.16□□□□□ -1.42
SCFD1-213ENST00000554776 KANK4Q5T7N3 995 aaPredicted RBP6.16□□□□□ -1.42
SCFD1-213ENST00000554776 NBPF10Q6P3W6 841 aaKnown RBP6.16□□□□□ -1.42
SCFD1-213ENST00000554776 OGFOD1Q8N543 542 aa6.16□□□□□ -1.42
SCFD1-213ENST00000554776 NBPF15Q8N660 670 aa6.16□□□□□ -1.42
SCFD1-213ENST00000554776 DNAAF2Q9NVR5 837 aaKnown RBP6.16□□□□□ -1.42
SCFD1-213ENST00000554776 KIAA1024Q9UPX6 916 aa6.16□□□□□ -1.42
SCFD1-213ENST00000554776 VSIG8P0DPA2 414 aa6.15□□□□□ -1.42
SCFD1-213ENST00000554776 LMOD1P29536 600 aaPredicted RBP6.15□□□□□ -1.42
SCFD1-213ENST00000554776 SMTNP53814 917 aa6.15□□□□□ -1.42
SCFD1-213ENST00000554776 MTFR1Q15390 333 aa6.15□□□□□ -1.42
SCFD1-213ENST00000554776 TAS1R3Q7RTX0 852 aa6.15□□□□□ -1.42
SCFD1-213ENST00000554776 PPARGC1BQ86YN6 1023 aaKnown RBP6.15□□□□□ -1.42
SCFD1-213ENST00000554776 SIX5Q8N196 739 aa6.15□□□□□ -1.42
SCFD1-213ENST00000554776 LARGE2Q8N3Y3 721 aa6.15□□□□□ -1.42
SCFD1-213ENST00000554776 CCDC82Q8N4S0 544 aa6.15□□□□□ -1.42
SCFD1-213ENST00000554776 ZNF358Q9NW07 568 aa6.15□□□□□ -1.42
SCFD1-213ENST00000554776 SERTAD1Q9UHV2 236 aa6.15□□□□□ -1.42
SCFD1-213ENST00000554776 BACH1O14867 736 aa6.14□□□□□ -1.43
SCFD1-213ENST00000554776 DKK1O94907 266 aa6.14□□□□□ -1.43
SCFD1-213ENST00000554776 ITGA6P23229 1130 aa6.14□□□□□ -1.43
SCFD1-213ENST00000554776 GNASQ5JWF2 1037 aa6.14□□□□□ -1.43
SCFD1-213ENST00000554776 CCDC102BQ68D86 513 aa6.14□□□□□ -1.43
SCFD1-213ENST00000554776 TMEM214Q6NUQ4 689 aaKnown RBP6.14□□□□□ -1.43
SCFD1-213ENST00000554776 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.14□□□□□ -1.43
SCFD1-213ENST00000554776 TPCN2Q8NHX9 752 aa6.14□□□□□ -1.43
SCFD1-213ENST00000554776 RHBDD1Q8TEB9 315 aa6.14□□□□□ -1.43
SCFD1-213ENST00000554776 IRF7Q92985 503 aa6.14□□□□□ -1.43
SCFD1-213ENST00000554776 DYRK1BQ9Y463 629 aa6.14□□□□□ -1.43
SCFD1-213ENST00000554776 ERBB4Q15303 1308 aa6.14□□□□□ -1.43
SCFD1-213ENST00000554776 A6NJY4 79 aa6.13□□□□□ -1.43
SCFD1-213ENST00000554776 RASA1P20936 1047 aa6.13□□□□□ -1.43
SCFD1-213ENST00000554776 GTF2E1P29083 439 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-213ENST00000554776 C4orf17Q53FE4 359 aa6.13□□□□□ -1.43
SCFD1-213ENST00000554776 ZNF295-AS1Q8N0V1 137 aa6.13□□□□□ -1.43
SCFD1-213ENST00000554776 NANOS1Q8WY41 292 aaKnown RBP6.13□□□□□ -1.43
SCFD1-213ENST00000554776 VRTNQ9H8Y1 702 aa6.13□□□□□ -1.43
SCFD1-213ENST00000554776 SERPINA10Q9UK55 444 aa6.13□□□□□ -1.43
SCFD1-213ENST00000554776 IQSEC3Q9UPP2 1182 aaPredicted RBP6.13□□□□□ -1.43
SCFD1-213ENST00000554776 FAM196BA6NMK8 535 aa6.12□□□□□ -1.43
SCFD1-213ENST00000554776 M0R2N6 131 aa6.12□□□□□ -1.43
SCFD1-213ENST00000554776 CDK2AP1O14519 115 aa6.12□□□□□ -1.43
SCFD1-213ENST00000554776 EPHA4P54764 986 aa6.12□□□□□ -1.43
SCFD1-213ENST00000554776 PTK7Q13308 1070 aa6.12□□□□□ -1.43
SCFD1-213ENST00000554776 CRTC2Q53ET0 693 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-213ENST00000554776 CCDC97Q96F63 343 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-213ENST00000554776 ZNF594Q96JF6 807 aaPredicted RBP6.12□□□□□ -1.43
SCFD1-213ENST00000554776 TIMMDC1Q9NPL8 285 aa6.12□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L15C9J2P7 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L10C9JJH3 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L13C9JLJ4 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L12C9JPN9 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L11C9JVI0 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L21D6R901 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L18D6R9N7 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L22D6RA61 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L17D6RBQ6 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L19D6RCP7 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L20D6RJB6 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 PHKA2P46019 1235 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 FOXK2Q01167 660 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP17L24Q0WX57 530 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 LARP1Q6PKG0 1096 aaKnown RBP6.11□□□□□ -1.43
SCFD1-213ENST00000554776 CUEDC1Q9NWM3 386 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-213ENST00000554776 SCHIP1Q9P0W5 487 aaPredicted RBP6.11□□□□□ -1.43
SCFD1-213ENST00000554776 USP3Q9Y6I4 520 aa6.11□□□□□ -1.43
SCFD1-213ENST00000554776 A0A1B0GTH6 734 aa6.1□□□□□ -1.43
SCFD1-213ENST00000554776 SFI1A8K8P3 1242 aa6.1□□□□□ -1.43
SCFD1-213ENST00000554776 WIPF1O43516 503 aa6.1□□□□□ -1.43
SCFD1-213ENST00000554776 F11P03951 625 aa6.1□□□□□ -1.43
SCFD1-213ENST00000554776 GMPRP36959 345 aa6.1□□□□□ -1.43
SCFD1-213ENST00000554776 TNS4Q8IZW8 715 aa6.1□□□□□ -1.43
SCFD1-213ENST00000554776 GMCL1Q96IK5 515 aa6.1□□□□□ -1.43
SCFD1-213ENST00000554776 NIFKQ9BYG3 293 aaKnown RBP6.1□□□□□ -1.43
SCFD1-213ENST00000554776 RFX1P22670 979 aa6.09□□□□□ -1.43
SCFD1-213ENST00000554776 PLA2G4AP47712 749 aa6.09□□□□□ -1.43
SCFD1-213ENST00000554776 SEC13P55735 322 aa6.09□□□□□ -1.43
SCFD1-213ENST00000554776 SRPK2P78362 688 aaKnown RBP6.09□□□□□ -1.43
SCFD1-213ENST00000554776 SV2AQ7L0J3 742 aa6.09□□□□□ -1.43
SCFD1-213ENST00000554776 TRIM22Q8IYM9 498 aa6.09□□□□□ -1.43
SCFD1-213ENST00000554776 VWA5B2Q8N398 1253 aa6.09□□□□□ -1.43
SCFD1-213ENST00000554776 GPR161Q8N6U8 529 aaKnown RBP6.09□□□□□ -1.43
SCFD1-213ENST00000554776 ARXQ96QS3 562 aa6.09□□□□□ -1.43
SCFD1-213ENST00000554776 GAS2L1Q99501 681 aaPredicted RBP6.09□□□□□ -1.43
SCFD1-213ENST00000554776 RBM19Q9Y4C8 960 aaKnown RBP6.09□□□□□ -1.43
SCFD1-213ENST00000554776 CDC14CA4D256 554 aa6.08□□□□□ -1.44
SCFD1-213ENST00000554776 H7C1W4 665 aa6.08□□□□□ -1.44
SCFD1-213ENST00000554776 MSX1P28360 303 aa6.08□□□□□ -1.44
SCFD1-213ENST00000554776 DPYDQ12882 1025 aa6.08□□□□□ -1.44
SCFD1-213ENST00000554776 DBN1Q16643 649 aa6.08□□□□□ -1.44
SCFD1-213ENST00000554776 RIPOR1Q6ZS17 1223 aa6.08□□□□□ -1.44
SCFD1-213ENST00000554776 ANKMY2Q8IV38 441 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms