RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 ZNF516Q92618 1163 aa8.08□□□□□ -1.12
ATXN3-230ENST00000554673 KDM4CQ9H3R0 1056 aa8.08□□□□□ -1.12
ATXN3-230ENST00000554673 IL21Q9HBE4 155 aa8.08□□□□□ -1.12
ATXN3-230ENST00000554673 AMOTL2Q9Y2J4 779 aa8.08□□□□□ -1.12
ATXN3-230ENST00000554673 FBLN1P23142 703 aa8.07□□□□□ -1.12
ATXN3-230ENST00000554673 CAMK2BQ13554 666 aa8.07□□□□□ -1.12
ATXN3-230ENST00000554673 IL27Q8NEV9 243 aa8.07□□□□□ -1.12
ATXN3-230ENST00000554673 ANKRD36BQ8N2N9 1353 aa8.07□□□□□ -1.12
ATXN3-230ENST00000554673 PIK3R4Q99570 1358 aa8.07□□□□□ -1.12
ATXN3-230ENST00000554673 NPC1L1Q9UHC9 1359 aa8.07□□□□□ -1.12
ATXN3-230ENST00000554673 RGPD2P0DJD1 1756 aa8.07□□□□□ -1.12
ATXN3-230ENST00000554673 ADGRL3Q9HAR2 1447 aa8.06□□□□□ -1.12
ATXN3-230ENST00000554673 ALS2Q96Q42 1657 aa8.06□□□□□ -1.12
ATXN3-230ENST00000554673 CCER2I3L3R5 266 aa8.06□□□□□ -1.12
ATXN3-230ENST00000554673 WASLO00401 505 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-230ENST00000554673 CNGB1Q14028 1251 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-230ENST00000554673 CDCA7LQ96GN5 454 aa8.06□□□□□ -1.12
ATXN3-230ENST00000554673 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.06□□□□□ -1.12
ATXN3-230ENST00000554673 PDZRN3Q9UPQ7 1066 aa8.06□□□□□ -1.12
ATXN3-230ENST00000554673 LTBP4Q8N2S1 1624 aa8.06□□□□□ -1.12
ATXN3-230ENST00000554673 RGPD1P0DJD0 1748 aa8.06□□□□□ -1.12
ATXN3-230ENST00000554673 PPIP5K1Q6PFW1 1433 aa8.05□□□□□ -1.12
ATXN3-230ENST00000554673 LRRC7Q96NW7 1537 aa8.05□□□□□ -1.12
ATXN3-230ENST00000554673 SENP3-EIF4A1A0A087X0R7 540 aa8.05□□□□□ -1.12
ATXN3-230ENST00000554673 CC2D1BQ5T0F9 858 aaKnown RBP8.05□□□□□ -1.12
ATXN3-230ENST00000554673 PUS7Q96PZ0 661 aaKnown RBP8.05□□□□□ -1.12
ATXN3-230ENST00000554673 PNMA3Q9UL41 463 aa8.05□□□□□ -1.12
ATXN3-230ENST00000554673 V9GY48 417 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-230ENST00000554673 RGPD5Q99666 1765 aa8.05□□□□□ -1.12
ATXN3-230ENST00000554673 ANKLE2Q86XL3 938 aa8.04□□□□□ -1.12
ATXN3-230ENST00000554673 PNISRQ8TF01 805 aaKnown RBP8.04□□□□□ -1.12
ATXN3-230ENST00000554673 CABP1Q9NZU7 370 aa8.04□□□□□ -1.12
ATXN3-230ENST00000554673 EVC2Q86UK5 1308 aa8.03□□□□□ -1.12
ATXN3-230ENST00000554673 OVOS2A0A0J9YW53 1432 aa8.03□□□□□ -1.12
ATXN3-230ENST00000554673 OVOS2Q6IE36 1432 aa8.03□□□□□ -1.12
ATXN3-230ENST00000554673 ABCA3Q99758 1704 aa8.03□□□□□ -1.12
ATXN3-230ENST00000554673 NUTM2FA1L443 756 aa8.03□□□□□ -1.12
ATXN3-230ENST00000554673 C3orf80F5H4A9 247 aa8.03□□□□□ -1.12
ATXN3-230ENST00000554673 TRIM66O15016 1216 aa8.03□□□□□ -1.12
ATXN3-230ENST00000554673 PPP2R1AP30153 589 aa8.03□□□□□ -1.12
ATXN3-230ENST00000554673 NKX2-3Q8TAU0 364 aa8.03□□□□□ -1.12
ATXN3-230ENST00000554673 NUDT16Q96DE0 195 aaKnown RBP8.03□□□□□ -1.12
ATXN3-230ENST00000554673 YTHDC1Q96MU7 727 aaKnown RBP8.03□□□□□ -1.12
ATXN3-230ENST00000554673 FAM198AQ9UFP1 575 aa8.03□□□□□ -1.12
ATXN3-230ENST00000554673 BLMP54132 1417 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-230ENST00000554673 LTN1O94822 1766 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 POLR3AO14802 1390 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-230ENST00000554673 DLG5Q8TDM6 1919 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 FYB1O15117 783 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 PRSS12P56730 875 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 PDE4DQ08499 809 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 TATDN2Q93075 761 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 ARID3AQ99856 593 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 POGKQ9P215 609 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 EID1Q9Y6B2 187 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 USP6P35125 1406 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 MST1RQ04912 1400 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 COL18A1P39060 1754 aa8.02□□□□□ -1.13
ATXN3-230ENST00000554673 MED1Q15648 1581 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-230ENST00000554673 ATAD2Q6PL18 1390 aa8.01□□□□□ -1.13
ATXN3-230ENST00000554673 NBPF26B4DH59 902 aa8.01□□□□□ -1.13
ATXN3-230ENST00000554673 ANP32CO43423 234 aa8.01□□□□□ -1.13
ATXN3-230ENST00000554673 APLP1P51693 650 aa8.01□□□□□ -1.13
ATXN3-230ENST00000554673 HDGFP51858 240 aaKnown RBP8.01□□□□□ -1.13
ATXN3-230ENST00000554673 COPS2P61201 443 aa8.01□□□□□ -1.13
ATXN3-230ENST00000554673 NME9Q86XW9 330 aa8.01□□□□□ -1.13
ATXN3-230ENST00000554673 GPIHBP1Q8IV16 184 aa8.01□□□□□ -1.13
ATXN3-230ENST00000554673 ZNF775Q96BV0 537 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-230ENST00000554673 NFAT5O94916 1531 aa8.01□□□□□ -1.13
ATXN3-230ENST00000554673 SMG6Q86US8 1419 aaKnown RBP8.01□□□□□ -1.13
ATXN3-230ENST00000554673 MYBBP1AQ9BQG0 1328 aaKnown RBP8.01□□□□□ -1.13
ATXN3-230ENST00000554673 ZNF335Q9H4Z2 1342 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-230ENST00000554673 IQSEC2Q5JU85 1478 aa8□□□□□ -1.13
ATXN3-230ENST00000554673 PHRF1Q9P1Y6 1649 aaKnown RBP8□□□□□ -1.13
ATXN3-230ENST00000554673 BRD4O60885 1362 aaPredicted RBP8□□□□□ -1.13
ATXN3-230ENST00000554673 KTN1Q86UP2 1357 aaKnown RBP8□□□□□ -1.13
ATXN3-230ENST00000554673 PLEKHG3A1L390 1219 aa8□□□□□ -1.13
ATXN3-230ENST00000554673 SRPK2P78362 688 aaKnown RBP8□□□□□ -1.13
ATXN3-230ENST00000554673 RBM26Q5T8P6 1007 aaKnown RBP8□□□□□ -1.13
ATXN3-230ENST00000554673 ANKARQ7Z5J8 1434 aa8□□□□□ -1.13
ATXN3-230ENST00000554673 NHSL1Q5SYE7 1610 aa8□□□□□ -1.13
ATXN3-230ENST00000554673 TMEM94Q12767 1356 aa7.99□□□□□ -1.13
ATXN3-230ENST00000554673 GRXCR2A6NFK2 248 aa7.99□□□□□ -1.13
ATXN3-230ENST00000554673 EDC4Q6P2E9 1401 aaKnown RBP7.99□□□□□ -1.13
ATXN3-230ENST00000554673 TMC1Q8TDI8 760 aa7.99□□□□□ -1.13
ATXN3-230ENST00000554673 GGNBP2Q9H3C7 697 aa7.99□□□□□ -1.13
ATXN3-230ENST00000554673 C1orf167Q5SNV9 1468 aa7.99□□□□□ -1.13
ATXN3-230ENST00000554673 ACEP12821 1306 aa7.99□□□□□ -1.13
ATXN3-230ENST00000554673 NINLQ9Y2I6 1382 aa7.98□□□□□ -1.13
ATXN3-230ENST00000554673 GGCXP38435 758 aa7.98□□□□□ -1.13
ATXN3-230ENST00000554673 PDIA6Q15084 440 aa7.98□□□□□ -1.13
ATXN3-230ENST00000554673 NUDT18Q6ZVK8 323 aa7.98□□□□□ -1.13
ATXN3-230ENST00000554673 ORAI2Q96SN7 254 aa7.98□□□□□ -1.13
ATXN3-230ENST00000554673 MRS2Q9HD23 443 aa7.98□□□□□ -1.13
ATXN3-230ENST00000554673 PXDNQ92626 1479 aa7.98□□□□□ -1.13
ATXN3-230ENST00000554673 KIF1AQ12756 1690 aa7.98□□□□□ -1.13
ATXN3-230ENST00000554673 VIRMAQ69YN4 1812 aaKnown RBP7.97□□□□□ -1.13
ATXN3-230ENST00000554673 MLLT3P42568 568 aaPredicted RBP7.97□□□□□ -1.13
ATXN3-230ENST00000554673 PRIM1P49642 420 aaKnown RBP7.97□□□□□ -1.13
ATXN3-230ENST00000554673 RALBP1Q15311 655 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms