RNA–Protein interactions for RNA: ENST00000554543.1

ITGA7-210, Transcript of integrin subunit alpha 7, humanhuman

TSL 3

Gene ITGA7, Length 707 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-210ENST00000554543 MSL1Q68DK7 614 aa16.78■□□□□ 0.28
ITGA7-210ENST00000554543 NFATC2IPQ8NCF5 419 aa16.78■□□□□ 0.28
ITGA7-210ENST00000554543 LINC00116Q8NCU8 138 aa16.78■□□□□ 0.28
ITGA7-210ENST00000554543 DCAF5Q96JK2 942 aa16.78■□□□□ 0.28
ITGA7-210ENST00000554543 RSPH6AQ9H0K4 717 aa16.78■□□□□ 0.28
ITGA7-210ENST00000554543 TJP1Q07157 1748 aa16.78■□□□□ 0.28
ITGA7-210ENST00000554543 SLC39A6Q13433 755 aa16.77■□□□□ 0.28
ITGA7-210ENST00000554543 SLC4A9Q96Q91 983 aa16.77■□□□□ 0.28
ITGA7-210ENST00000554543 COL5A3P25940 1745 aaPredicted RBP16.76■□□□□ 0.27
ITGA7-210ENST00000554543 LOC102724428A0A0B4J2F2 783 aa16.76■□□□□ 0.27
ITGA7-210ENST00000554543 SIK1P57059 783 aa16.76■□□□□ 0.27
ITGA7-210ENST00000554543 AKAP4Q5JQC9 854 aa16.76■□□□□ 0.27
ITGA7-210ENST00000554543 PPP1R1BQ9UD71 204 aaPredicted RBP16.76■□□□□ 0.27
ITGA7-210ENST00000554543 SIPA1L3O60292 1781 aaPredicted RBP16.76■□□□□ 0.27
ITGA7-210ENST00000554543 MYH14Q7Z406 1995 aaKnown RBP16.75■□□□□ 0.27
ITGA7-210ENST00000554543 RNMTO43148 476 aaKnown RBP16.75■□□□□ 0.27
ITGA7-210ENST00000554543 HSP90AB1P08238 724 aaKnown RBP16.75■□□□□ 0.27
ITGA7-210ENST00000554543 ATP6V1AP38606 617 aa16.75■□□□□ 0.27
ITGA7-210ENST00000554543 SPON1Q9HCB6 807 aa16.75■□□□□ 0.27
ITGA7-210ENST00000554543 ERVV-2B6SEH9 535 aa16.74■□□□□ 0.27
ITGA7-210ENST00000554543 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
ITGA7-210ENST00000554543 COL23A1Q86Y22 540 aaPredicted RBP16.74■□□□□ 0.27
ITGA7-210ENST00000554543 KLHL34Q8N239 644 aa16.74■□□□□ 0.27
ITGA7-210ENST00000554543 SMARCC1Q92922 1105 aaPredicted RBP16.74■□□□□ 0.27
ITGA7-210ENST00000554543 NUDCQ9Y266 331 aa16.74■□□□□ 0.27
ITGA7-210ENST00000554543 ADAMTS7Q9UKP4 1686 aa16.74■□□□□ 0.27
ITGA7-210ENST00000554543 AK7Q96M32 723 aa16.73■□□□□ 0.27
ITGA7-210ENST00000554543 MAP3K5Q99683 1374 aa16.73■□□□□ 0.27
ITGA7-210ENST00000554543 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
ITGA7-210ENST00000554543 PTGER2P43116 358 aa16.72■□□□□ 0.27
ITGA7-210ENST00000554543 GNPATO15228 680 aa16.71■□□□□ 0.27
ITGA7-210ENST00000554543 MCM10Q7L590 875 aa16.71■□□□□ 0.27
ITGA7-210ENST00000554543 IL17REQ8NFR9 667 aa16.71■□□□□ 0.27
ITGA7-210ENST00000554543 SLC52A2Q9HAB3 445 aa16.71■□□□□ 0.27
ITGA7-210ENST00000554543 MRC1P22897 1456 aa16.71■□□□□ 0.27
ITGA7-210ENST00000554543 C4AP0C0L4 1744 aa16.7■□□□□ 0.26
ITGA7-210ENST00000554543 UBR2Q8IWV8 1755 aa16.7■□□□□ 0.26
ITGA7-210ENST00000554543 ZNF316A6NFI3 1004 aaPredicted RBP16.7■□□□□ 0.26
ITGA7-210ENST00000554543 CCDC146Q8IYE0 955 aa16.7■□□□□ 0.26
ITGA7-210ENST00000554543 KCPQ6ZWJ8 1503 aa16.7■□□□□ 0.26
ITGA7-210ENST00000554543 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
ITGA7-210ENST00000554543 GNAT3A8MTJ3 354 aa16.69■□□□□ 0.26
ITGA7-210ENST00000554543 PLEKHG2Q9H7P9 1386 aa16.68■□□□□ 0.26
ITGA7-210ENST00000554543 KCNQ3O43525 872 aa16.68■□□□□ 0.26
ITGA7-210ENST00000554543 RALBP1Q15311 655 aa16.68■□□□□ 0.26
ITGA7-210ENST00000554543 GAS2L2Q8NHY3 880 aa16.68■□□□□ 0.26
ITGA7-210ENST00000554543 THUMPD2Q9BTF0 503 aaKnown RBP16.68■□□□□ 0.26
ITGA7-210ENST00000554543 MTFR1LQ9H019 292 aa16.68■□□□□ 0.26
ITGA7-210ENST00000554543 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.67■□□□□ 0.26
ITGA7-210ENST00000554543 DNAJC10Q8IXB1 793 aa16.67■□□□□ 0.26
ITGA7-210ENST00000554543 RRP7AQ9Y3A4 280 aaKnown RBP16.67■□□□□ 0.26
ITGA7-210ENST00000554543 TEFQ10587 303 aa16.66■□□□□ 0.26
ITGA7-210ENST00000554543 COL24A1Q17RW2 1714 aa16.66■□□□□ 0.26
ITGA7-210ENST00000554543 CCDC184Q52MB2 194 aa16.66■□□□□ 0.26
ITGA7-210ENST00000554543 PRKRIP1Q9H875 184 aaPredicted RBP16.66■□□□□ 0.26
ITGA7-210ENST00000554543 MIS18AQ9NYP9 233 aa16.66■□□□□ 0.26
ITGA7-210ENST00000554543 FHDC1Q9C0D6 1143 aaPredicted RBP16.65■□□□□ 0.26
ITGA7-210ENST00000554543 ZNF831Q5JPB2 1677 aa16.65■□□□□ 0.26
ITGA7-210ENST00000554543 FCHSD2O94868 740 aa16.64■□□□□ 0.25
ITGA7-210ENST00000554543 SGIP1Q9BQI5 828 aa16.64■□□□□ 0.25
ITGA7-210ENST00000554543 CRKLP46109 303 aaKnown RBP16.63■□□□□ 0.25
ITGA7-210ENST00000554543 ARXQ96QS3 562 aa16.63■□□□□ 0.25
ITGA7-210ENST00000554543 PLEKHF1Q96S99 279 aa16.63■□□□□ 0.25
ITGA7-210ENST00000554543 WWC3Q9ULE0 1092 aa16.63■□□□□ 0.25
ITGA7-210ENST00000554543 PRAMEF22A3QJZ6 481 aa16.62■□□□□ 0.25
ITGA7-210ENST00000554543 PIP4K2AP48426 406 aaPredicted RBP16.62■□□□□ 0.25
ITGA7-210ENST00000554543 NEUROD2Q15784 382 aa16.62■□□□□ 0.25
ITGA7-210ENST00000554543 RTF1Q92541 710 aaKnown RBP16.62■□□□□ 0.25
ITGA7-210ENST00000554543 SRP68Q9UHB9 627 aaKnown RBP16.62■□□□□ 0.25
ITGA7-210ENST00000554543 MAPK8IP3Q9UPT6 1336 aa16.62■□□□□ 0.25
ITGA7-210ENST00000554543 ZNF496Q96IT1 587 aaPredicted RBP16.61■□□□□ 0.25
ITGA7-210ENST00000554543 CICQ96RK0 1608 aaPredicted RBP16.6■□□□□ 0.25
ITGA7-210ENST00000554543 KDM3BQ7LBC6 1761 aa16.6■□□□□ 0.25
ITGA7-210ENST00000554543 BTBD11A6QL63 1104 aa16.6■□□□□ 0.25
ITGA7-210ENST00000554543 TTC5Q8N0Z6 440 aa16.6■□□□□ 0.25
ITGA7-210ENST00000554543 ZNF330Q9Y3S2 320 aaPredicted RBP16.6■□□□□ 0.25
ITGA7-210ENST00000554543 CEMIPQ8WUJ3 1361 aa16.6■□□□□ 0.25
ITGA7-210ENST00000554543 CANXP27824 592 aaKnown RBP16.59■□□□□ 0.25
ITGA7-210ENST00000554543 POLD1P28340 1107 aa16.59■□□□□ 0.25
ITGA7-210ENST00000554543 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.25
ITGA7-210ENST00000554543 NFE2L2Q16236 605 aa16.59■□□□□ 0.25
ITGA7-210ENST00000554543 INTS5Q6P9B9 1019 aaKnown RBP16.59■□□□□ 0.25
ITGA7-210ENST00000554543 PELP1Q8IZL8 1130 aaKnown RBP16.59■□□□□ 0.25
ITGA7-210ENST00000554543 NLGN2Q8NFZ4 835 aa16.59■□□□□ 0.25
ITGA7-210ENST00000554543 ARHGEF1Q92888 912 aaKnown RBP16.59■□□□□ 0.25
ITGA7-210ENST00000554543 RTCBQ9Y3I0 505 aaKnown RBP16.59■□□□□ 0.25
ITGA7-210ENST00000554543 NEFMP07197 916 aa16.58■□□□□ 0.24
ITGA7-210ENST00000554543 ZNF790Q6PG37 636 aa16.58■□□□□ 0.24
ITGA7-210ENST00000554543 ADAMTS8Q9UP79 889 aa16.58■□□□□ 0.24
ITGA7-210ENST00000554543 ZBTB1Q9Y2K1 713 aa16.58■□□□□ 0.24
ITGA7-210ENST00000554543 CNTNAP4Q9C0A0 1308 aa16.58■□□□□ 0.24
ITGA7-210ENST00000554543 GOLGB1Q14789 3259 aaKnown RBP16.57■□□□□ 0.24
ITGA7-210ENST00000554543 CYP19A1P11511 503 aaPredicted RBP16.57■□□□□ 0.24
ITGA7-210ENST00000554543 SSFA2P28290 1259 aa16.57■□□□□ 0.24
ITGA7-210ENST00000554543 TRAPPC3LQ5T215 181 aa16.57■□□□□ 0.24
ITGA7-210ENST00000554543 SYT17Q9BSW7 474 aa16.57■□□□□ 0.24
ITGA7-210ENST00000554543 CCDC87Q9NVE4 849 aa16.57■□□□□ 0.24
ITGA7-210ENST00000554543 SLC16A10Q8TF71 515 aa16.56■□□□□ 0.24
ITGA7-210ENST00000554543 N4BP2Q86UW6 1770 aaPredicted RBP16.56■□□□□ 0.24
ITGA7-210ENST00000554543 HEG1Q9ULI3 1381 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms