RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 LRRFIP2Q9Y608 721 aaKnown RBP19.29■□□□□ 0.68
ARHGEF40-203ENST00000554514 RRAGDQ9NQL2 400 aaPredicted RBP19.28■□□□□ 0.68
ARHGEF40-203ENST00000554514 PIK3C2AO00443 1686 aa19.28■□□□□ 0.68
ARHGEF40-203ENST00000554514 TRIM6-TRIM34B2RNG4 842 aa19.28■□□□□ 0.68
ARHGEF40-203ENST00000554514 PKP1Q13835 747 aa19.28■□□□□ 0.68
ARHGEF40-203ENST00000554514 GRPEL1Q9HAV7 217 aa19.28■□□□□ 0.68
ARHGEF40-203ENST00000554514 ERC2O15083 957 aa19.27■□□□□ 0.68
ARHGEF40-203ENST00000554514 REC8O95072 547 aa19.27■□□□□ 0.68
ARHGEF40-203ENST00000554514 PHAXQ9H814 394 aaKnown RBP19.27■□□□□ 0.68
ARHGEF40-203ENST00000554514 NOL8Q76FK4 1167 aaKnown RBP19.27■□□□□ 0.67
ARHGEF40-203ENST00000554514 LRRCC1Q9C099 1032 aa19.27■□□□□ 0.67
ARHGEF40-203ENST00000554514 ZGPATQ8N5A5 531 aaKnown RBP19.26■□□□□ 0.67
ARHGEF40-203ENST00000554514 SETD1BQ9UPS6 1966 aaKnown RBP19.26■□□□□ 0.67
ARHGEF40-203ENST00000554514 MRE11P49959 708 aa19.26■□□□□ 0.67
ARHGEF40-203ENST00000554514 TAF7Q15545 349 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF40-203ENST00000554514 HDGFL1Q5TGJ6 251 aa19.26■□□□□ 0.67
ARHGEF40-203ENST00000554514 FOXD4L5Q5VV16 416 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF40-203ENST00000554514 GAS2L3Q86XJ1 694 aa19.26■□□□□ 0.67
ARHGEF40-203ENST00000554514 FOXD4L4Q8WXT5 416 aaPredicted RBP19.26■□□□□ 0.67
ARHGEF40-203ENST00000554514 ST18O60284 1047 aa19.25■□□□□ 0.67
ARHGEF40-203ENST00000554514 NCLP19338 710 aaKnown RBP19.25■□□□□ 0.67
ARHGEF40-203ENST00000554514 MCTP1Q6DN14 999 aa19.25■□□□□ 0.67
ARHGEF40-203ENST00000554514 IL1RAPL2Q9NP60 686 aa19.25■□□□□ 0.67
ARHGEF40-203ENST00000554514 MAP3K5Q99683 1374 aa19.25■□□□□ 0.67
ARHGEF40-203ENST00000554514 GOLGA6L22H0YM25 854 aa19.25■□□□□ 0.67
ARHGEF40-203ENST00000554514 GNAI3P08754 354 aa19.25■□□□□ 0.67
ARHGEF40-203ENST00000554514 BAG4O95429 457 aaKnown RBP19.24■□□□□ 0.67
ARHGEF40-203ENST00000554514 DDX49Q9Y6V7 483 aaKnown RBP19.24■□□□□ 0.67
ARHGEF40-203ENST00000554514 MX1P20591 662 aa19.24■□□□□ 0.67
ARHGEF40-203ENST00000554514 ANXA1P04083 346 aa19.23■□□□□ 0.67
ARHGEF40-203ENST00000554514 UBTFL1P0CB47 393 aaPredicted RBP19.23■□□□□ 0.67
ARHGEF40-203ENST00000554514 HTATSF1O43719 755 aaKnown RBP19.22■□□□□ 0.67
ARHGEF40-203ENST00000554514 MAP4K4O95819 1239 aaPredicted RBP19.22■□□□□ 0.67
ARHGEF40-203ENST00000554514 ATP8B2P98198 1209 aa19.22■□□□□ 0.67
ARHGEF40-203ENST00000554514 SLIT1O75093 1534 aa19.22■□□□□ 0.67
ARHGEF40-203ENST00000554514 ARHGAP23Q9P227 1491 aa19.22■□□□□ 0.67
ARHGEF40-203ENST00000554514 SKOR2Q2VWA4 1001 aaPredicted RBP19.22■□□□□ 0.67
ARHGEF40-203ENST00000554514 CHAMP1Q96JM3 812 aa19.22■□□□□ 0.67
ARHGEF40-203ENST00000554514 LGR6Q9HBX8 967 aa19.22■□□□□ 0.67
ARHGEF40-203ENST00000554514 ANO2Q9NQ90 1003 aa19.22■□□□□ 0.67
ARHGEF40-203ENST00000554514 NEK4P51957 841 aa19.21■□□□□ 0.67
ARHGEF40-203ENST00000554514 NUTM1Q86Y26 1132 aa19.21■□□□□ 0.67
ARHGEF40-203ENST00000554514 PHF8Q9UPP1 1060 aa19.21■□□□□ 0.67
ARHGEF40-203ENST00000554514 XPCQ01831 940 aaPredicted RBP19.21■□□□□ 0.67
ARHGEF40-203ENST00000554514 LMOD2Q6P5Q4 547 aa19.21■□□□□ 0.67
ARHGEF40-203ENST00000554514 USP44Q9H0E7 712 aa19.21■□□□□ 0.67
ARHGEF40-203ENST00000554514 LRRC59Q96AG4 307 aaKnown RBP19.2■□□□□ 0.66
ARHGEF40-203ENST00000554514 KCNQ3O43525 872 aa19.2■□□□□ 0.66
ARHGEF40-203ENST00000554514 ESCO1Q5FWF5 840 aa19.2■□□□□ 0.66
ARHGEF40-203ENST00000554514 NBPF6Q5VWK0 638 aa19.2■□□□□ 0.66
ARHGEF40-203ENST00000554514 UNC5CLQ8IV45 518 aa19.2■□□□□ 0.66
ARHGEF40-203ENST00000554514 NBPF4Q96M43 638 aa19.2■□□□□ 0.66
ARHGEF40-203ENST00000554514 OSBPL3Q9H4L5 887 aa19.2■□□□□ 0.66
ARHGEF40-203ENST00000554514 ESYT1Q9BSJ8 1104 aa19.19■□□□□ 0.66
ARHGEF40-203ENST00000554514 PSME1Q06323 249 aa19.18■□□□□ 0.66
ARHGEF40-203ENST00000554514 PALD1Q9ULE6 856 aa19.18■□□□□ 0.66
ARHGEF40-203ENST00000554514 SURF6O75683 361 aaKnown RBP19.18■□□□□ 0.66
ARHGEF40-203ENST00000554514 NUCB2P80303 420 aa19.18■□□□□ 0.66
ARHGEF40-203ENST00000554514 CHPF2Q9P2E5 772 aa19.18■□□□□ 0.66
ARHGEF40-203ENST00000554514 IBTKQ9P2D0 1353 aaPredicted RBP19.17■□□□□ 0.66
ARHGEF40-203ENST00000554514 MPRIPQ6WCQ1 1025 aa19.17■□□□□ 0.66
ARHGEF40-203ENST00000554514 PPP1R42Q7Z4L9 355 aa19.17■□□□□ 0.66
ARHGEF40-203ENST00000554514 NWD1Q149M9 1564 aa19.17■□□□□ 0.66
ARHGEF40-203ENST00000554514 PTMSP20962 102 aa19.17■□□□□ 0.66
ARHGEF40-203ENST00000554514 FER1L4A9Z1Z3 1794 aa19.16■□□□□ 0.66
ARHGEF40-203ENST00000554514 CAVIN1Q6NZI2 390 aaKnown RBP19.16■□□□□ 0.66
ARHGEF40-203ENST00000554514 SRCIN1Q9C0H9 1055 aa19.16■□□□□ 0.66
ARHGEF40-203ENST00000554514 CHMLP26374 656 aa19.16■□□□□ 0.66
ARHGEF40-203ENST00000554514 SALL3Q9BXA9 1300 aa19.16■□□□□ 0.66
ARHGEF40-203ENST00000554514 FAM208AQ9UK61 1670 aaKnown RBP19.16■□□□□ 0.66
ARHGEF40-203ENST00000554514 ANKARQ7Z5J8 1434 aa19.15■□□□□ 0.66
ARHGEF40-203ENST00000554514 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
ARHGEF40-203ENST00000554514 PRPF40AO75400 957 aaKnown RBP19.15■□□□□ 0.66
ARHGEF40-203ENST00000554514 NBPF7P0C2Y1 421 aaPredicted RBP19.15■□□□□ 0.66
ARHGEF40-203ENST00000554514 UPF3BQ9BZI7 483 aaKnown RBP19.15■□□□□ 0.66
ARHGEF40-203ENST00000554514 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.66
ARHGEF40-203ENST00000554514 TEFQ10587 303 aa19.14■□□□□ 0.66
ARHGEF40-203ENST00000554514 PI4KAP2A4QPH2 592 aa19.14■□□□□ 0.65
ARHGEF40-203ENST00000554514 ZNF530Q6P9A1 599 aaPredicted RBP19.14■□□□□ 0.65
ARHGEF40-203ENST00000554514 PI4KAP1Q8N8J0 262 aa19.14■□□□□ 0.65
ARHGEF40-203ENST00000554514 IP6K1Q92551 441 aa19.14■□□□□ 0.65
ARHGEF40-203ENST00000554514 TMX3Q96JJ7 454 aa19.14■□□□□ 0.65
ARHGEF40-203ENST00000554514 MCCP23508 829 aa19.14■□□□□ 0.65
ARHGEF40-203ENST00000554514 FOXD4L6Q3SYB3 417 aaPredicted RBP19.14■□□□□ 0.65
ARHGEF40-203ENST00000554514 FOXD4L3Q6VB84 417 aaPredicted RBP19.14■□□□□ 0.65
ARHGEF40-203ENST00000554514 KLHL40Q2TBA0 621 aa19.13■□□□□ 0.65
ARHGEF40-203ENST00000554514 IL25Q9H293 177 aa19.13■□□□□ 0.65
ARHGEF40-203ENST00000554514 XRN1Q8IZH2 1706 aaKnown RBP19.13■□□□□ 0.65
ARHGEF40-203ENST00000554514 EIF4A1P60842 406 aaKnown RBP19.13■□□□□ 0.65
ARHGEF40-203ENST00000554514 CWC22Q9HCG8 908 aaKnown RBP19.13■□□□□ 0.65
ARHGEF40-203ENST00000554514 BTBD11A6QL63 1104 aa19.12■□□□□ 0.65
ARHGEF40-203ENST00000554514 ZDHHC9Q9Y397 364 aa19.12■□□□□ 0.65
ARHGEF40-203ENST00000554514 LRRC37A3O60309 1634 aa19.12■□□□□ 0.65
ARHGEF40-203ENST00000554514 CYP2E1P05181 493 aaPredicted RBP19.12■□□□□ 0.65
ARHGEF40-203ENST00000554514 SOS1Q07889 1333 aaPredicted RBP19.12■□□□□ 0.65
ARHGEF40-203ENST00000554514 TRIM44Q96DX7 344 aaPredicted RBP19.12■□□□□ 0.65
ARHGEF40-203ENST00000554514 MARF1Q9Y4F3 1742 aaKnown RBP19.12■□□□□ 0.65
ARHGEF40-203ENST00000554514 OS9Q13438 667 aaPredicted RBP19.11■□□□□ 0.65
ARHGEF40-203ENST00000554514 LMBRD1Q9NUN5 540 aa19.11■□□□□ 0.65
ARHGEF40-203ENST00000554514 RBM27Q9P2N5 1060 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms