RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 HNRNPUQ00839 825 aaKnown RBP eCLIP23.88■■□□□ 1.41
PPP4R3A-203ENST00000554511 CALD1Q05682 793 aaKnown RBP23.87■■□□□ 1.41
PPP4R3A-203ENST00000554511 ATF5Q9Y2D1 282 aaPredicted RBP23.86■■□□□ 1.41
PPP4R3A-203ENST00000554511 MPRIPQ6WCQ1 1025 aa23.85■■□□□ 1.41
PPP4R3A-203ENST00000554511 SALL2Q9Y467 1007 aaPredicted RBP23.85■■□□□ 1.41
PPP4R3A-203ENST00000554511 BTAF1O14981 1849 aa23.84■■□□□ 1.41
PPP4R3A-203ENST00000554511 KAT6BQ8WYB5 2073 aa23.84■■□□□ 1.41
PPP4R3A-203ENST00000554511 ERVV-2B6SEH9 535 aa23.83■■□□□ 1.41
PPP4R3A-203ENST00000554511 RNMTO43148 476 aaKnown RBP23.83■■□□□ 1.41
PPP4R3A-203ENST00000554511 PTGER2P43116 358 aa23.83■■□□□ 1.41
PPP4R3A-203ENST00000554511 TRIM35Q9UPQ4 493 aa23.83■■□□□ 1.41
PPP4R3A-203ENST00000554511 TEFQ10587 303 aa23.82■■□□□ 1.4
PPP4R3A-203ENST00000554511 LRRC4BQ9NT99 713 aa23.82■■□□□ 1.4
PPP4R3A-203ENST00000554511 DCAF8L1A6NGE4 600 aa23.81■■□□□ 1.4
PPP4R3A-203ENST00000554511 MCM10Q7L590 875 aa23.81■■□□□ 1.4
PPP4R3A-203ENST00000554511 WWC1Q8IX03 1113 aa23.81■■□□□ 1.4
PPP4R3A-203ENST00000554511 IL17REQ8NFR9 667 aa23.81■■□□□ 1.4
PPP4R3A-203ENST00000554511 SYTL4Q96C24 671 aaPredicted RBP23.81■■□□□ 1.4
PPP4R3A-203ENST00000554511 CABP4P57796 275 aa23.8■■□□□ 1.4
PPP4R3A-203ENST00000554511 WDR63Q8IWG1 891 aa23.8■■□□□ 1.4
PPP4R3A-203ENST00000554511 MTFR1LQ9H019 292 aa23.8■■□□□ 1.4
PPP4R3A-203ENST00000554511 LGR6Q9HBX8 967 aa23.8■■□□□ 1.4
PPP4R3A-203ENST00000554511 SENP3-EIF4A1A0A087X0R7 540 aa23.79■■□□□ 1.4
PPP4R3A-203ENST00000554511 PRIM1P49642 420 aaKnown RBP23.79■■□□□ 1.4
PPP4R3A-203ENST00000554511 ZNF827Q17R98 1081 aa23.79■■□□□ 1.4
PPP4R3A-203ENST00000554511 PAPPAQ13219 1627 aa23.79■■□□□ 1.4
PPP4R3A-203ENST00000554511 DCTN1Q14203 1278 aa23.78■■□□□ 1.4
PPP4R3A-203ENST00000554511 SHANK3Q9BYB0 1731 aa23.77■■□□□ 1.4
PPP4R3A-203ENST00000554511 SLC27A3Q5K4L6 730 aa23.77■■□□□ 1.4
PPP4R3A-203ENST00000554511 CEMIPQ8WUJ3 1361 aa23.77■■□□□ 1.4
PPP4R3A-203ENST00000554511 YY1P25490 414 aa23.76■■□□□ 1.39
PPP4R3A-203ENST00000554511 TAF7Q15545 349 aaPredicted RBP23.76■■□□□ 1.39
PPP4R3A-203ENST00000554511 YTHDC1Q96MU7 727 aaKnown RBP23.76■■□□□ 1.39
PPP4R3A-203ENST00000554511 SLC52A2Q9HAB3 445 aa23.76■■□□□ 1.39
PPP4R3A-203ENST00000554511 BABAM1Q9NWV8 329 aa23.76■■□□□ 1.39
PPP4R3A-203ENST00000554511 TMOD3Q9NYL9 352 aa23.76■■□□□ 1.39
PPP4R3A-203ENST00000554511 SGIP1Q9BQI5 828 aa23.75■■□□□ 1.39
PPP4R3A-203ENST00000554511 IL16Q14005 1332 aa23.75■■□□□ 1.39
PPP4R3A-203ENST00000554511 ZBED9Q6R2W3 1325 aa23.75■■□□□ 1.39
PPP4R3A-203ENST00000554511 KDM6AO15550 1401 aaPredicted RBP23.75■■□□□ 1.39
PPP4R3A-203ENST00000554511 GNAI1P63096 354 aa23.74■■□□□ 1.39
PPP4R3A-203ENST00000554511 GOLGA2Q08379 1002 aa23.74■■□□□ 1.39
PPP4R3A-203ENST00000554511 NFATC2IPQ8NCF5 419 aa23.74■■□□□ 1.39
PPP4R3A-203ENST00000554511 AKT1S1Q96B36 256 aa23.74■■□□□ 1.39
PPP4R3A-203ENST00000554511 DLG5Q8TDM6 1919 aa23.74■■□□□ 1.39
PPP4R3A-203ENST00000554511 KCNQ4P56696 695 aa23.73■■□□□ 1.39
PPP4R3A-203ENST00000554511 THUMPD2Q9BTF0 503 aaKnown RBP23.73■■□□□ 1.39
PPP4R3A-203ENST00000554511 FHDC1Q9C0D6 1143 aaPredicted RBP23.73■■□□□ 1.39
PPP4R3A-203ENST00000554511 SYT17Q9BSW7 474 aa23.72■■□□□ 1.39
PPP4R3A-203ENST00000554511 DOT1LQ8TEK3 1739 aa23.72■■□□□ 1.39
PPP4R3A-203ENST00000554511 ZNF521Q96K83 1311 aa23.71■■□□□ 1.39
PPP4R3A-203ENST00000554511 BTBD11A6QL63 1104 aa23.71■■□□□ 1.39
PPP4R3A-203ENST00000554511 CFAP44Q96MT7 982 aa23.71■■□□□ 1.39
PPP4R3A-203ENST00000554511 IFT57Q9NWB7 429 aa23.71■■□□□ 1.39
PPP4R3A-203ENST00000554511 LAS1LQ9Y4W2 734 aaKnown RBP23.71■■□□□ 1.39
PPP4R3A-203ENST00000554511 MYH16Q9H6N6 1097 aa23.7■■□□□ 1.38
PPP4R3A-203ENST00000554511 SCN11AQ9UI33 1791 aa23.7■■□□□ 1.38
PPP4R3A-203ENST00000554511 ARXQ96QS3 562 aa23.69■■□□□ 1.38
PPP4R3A-203ENST00000554511 ADAMTS7Q9UKP4 1686 aa23.69■■□□□ 1.38
PPP4R3A-203ENST00000554511 E9PSI1 815 aa23.68■■□□□ 1.38
PPP4R3A-203ENST00000554511 TTC5Q8N0Z6 440 aa23.68■■□□□ 1.38
PPP4R3A-203ENST00000554511 PIGBQ92521 554 aa23.68■■□□□ 1.38
PPP4R3A-203ENST00000554511 TFCP2L1Q9NZI6 479 aa23.68■■□□□ 1.38
PPP4R3A-203ENST00000554511 PNPLA7Q6ZV29 1317 aa23.67■■□□□ 1.38
PPP4R3A-203ENST00000554511 CHL1O00533 1208 aa23.67■■□□□ 1.38
PPP4R3A-203ENST00000554511 SMARCC1Q92922 1105 aaPredicted RBP23.67■■□□□ 1.38
PPP4R3A-203ENST00000554511 TSPYL4Q9UJ04 414 aa23.67■■□□□ 1.38
PPP4R3A-203ENST00000554511 CCNL1Q9UK58 526 aaPredicted RBP23.67■■□□□ 1.38
PPP4R3A-203ENST00000554511 SLC16A10Q8TF71 515 aa23.66■■□□□ 1.38
PPP4R3A-203ENST00000554511 MRC1P22897 1456 aa23.66■■□□□ 1.38
PPP4R3A-203ENST00000554511 ZNF853P0CG23 659 aa23.65■■□□□ 1.38
PPP4R3A-203ENST00000554511 LY75O60449 1722 aa23.64■■□□□ 1.38
PPP4R3A-203ENST00000554511 SLFN5Q08AF3 891 aa23.63■■□□□ 1.37
PPP4R3A-203ENST00000554511 ZNF790Q6PG37 636 aa23.63■■□□□ 1.37
PPP4R3A-203ENST00000554511 HMGB2P26583 209 aaKnown RBP23.62■■□□□ 1.37
PPP4R3A-203ENST00000554511 MIS18AQ9NYP9 233 aa23.62■■□□□ 1.37
PPP4R3A-203ENST00000554511 QSER1Q2KHR3 1735 aa23.62■■□□□ 1.37
PPP4R3A-203ENST00000554511 POLD1P28340 1107 aa23.61■■□□□ 1.37
PPP4R3A-203ENST00000554511 MBIPQ9NS73 344 aa23.61■■□□□ 1.37
PPP4R3A-203ENST00000554511 UTRNP46939 3433 aa23.6■■□□□ 1.37
PPP4R3A-203ENST00000554511 TOGARAM1Q9Y4F4 1720 aa23.6■■□□□ 1.37
PPP4R3A-203ENST00000554511 ATG3Q9NT62 314 aa23.6■■□□□ 1.37
PPP4R3A-203ENST00000554511 VIRMAQ69YN4 1812 aaKnown RBP23.6■■□□□ 1.37
PPP4R3A-203ENST00000554511 SLC39A6Q13433 755 aa23.59■■□□□ 1.37
PPP4R3A-203ENST00000554511 FMNL2Q96PY5 1086 aa23.59■■□□□ 1.37
PPP4R3A-203ENST00000554511 CHMP4AQ9BY43 222 aa23.59■■□□□ 1.37
PPP4R3A-203ENST00000554511 ASAP1Q9ULH1 1129 aa23.59■■□□□ 1.37
PPP4R3A-203ENST00000554511 CDCA7LQ96GN5 454 aa23.58■■□□□ 1.37
PPP4R3A-203ENST00000554511 ITGB4P16144 1822 aa23.58■■□□□ 1.37
PPP4R3A-203ENST00000554511 TUBGCP6Q96RT7 1819 aa23.57■■□□□ 1.36
PPP4R3A-203ENST00000554511 KLHL34Q8N239 644 aa23.57■■□□□ 1.36
PPP4R3A-203ENST00000554511 PALLDQ8WX93 1383 aa23.56■■□□□ 1.36
PPP4R3A-203ENST00000554511 SIPA1L3O60292 1781 aaPredicted RBP23.56■■□□□ 1.36
PPP4R3A-203ENST00000554511 MSH5O43196 834 aa23.56■■□□□ 1.36
PPP4R3A-203ENST00000554511 EIF4A1P60842 406 aaKnown RBP23.56■■□□□ 1.36
PPP4R3A-203ENST00000554511 TRMT2AQ8IZ69 625 aaKnown RBP23.56■■□□□ 1.36
PPP4R3A-203ENST00000554511 TSR2Q969E8 191 aaKnown RBP23.56■■□□□ 1.36
PPP4R3A-203ENST00000554511 SPINK5Q9NQ38 1064 aaPredicted RBP23.56■■□□□ 1.36
PPP4R3A-203ENST00000554511 FANCIQ9NVI1 1328 aa23.56■■□□□ 1.36
PPP4R3A-203ENST00000554511 COL23A1Q86Y22 540 aaPredicted RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms