RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 CEMIPQ8WUJ3 1361 aa13.5□□□□□ -0.25
TMEM55B-205ENST00000554028 BTBD11A6QL63 1104 aa13.5□□□□□ -0.25
TMEM55B-205ENST00000554028 EXOSC9Q06265 439 aaKnown RBP13.5□□□□□ -0.25
TMEM55B-205ENST00000554028 NKX1-1Q15270 411 aaPredicted RBP13.5□□□□□ -0.25
TMEM55B-205ENST00000554028 FAM98CQ17RN3 349 aaKnown RBP13.5□□□□□ -0.25
TMEM55B-205ENST00000554028 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
TMEM55B-205ENST00000554028 QTRT2Q9H974 415 aaKnown RBP13.5□□□□□ -0.25
TMEM55B-205ENST00000554028 SUPT16HQ9Y5B9 1047 aaKnown RBP13.5□□□□□ -0.25
TMEM55B-205ENST00000554028 PARP4Q9UKK3 1724 aaKnown RBP13.5□□□□□ -0.25
TMEM55B-205ENST00000554028 DISP2A7MBM2 1401 aa13.49□□□□□ -0.25
TMEM55B-205ENST00000554028 ERVV-2B6SEH9 535 aa13.49□□□□□ -0.25
TMEM55B-205ENST00000554028 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.49□□□□□ -0.25
TMEM55B-205ENST00000554028 NRAPQ86VF7 1730 aa13.48□□□□□ -0.25
TMEM55B-205ENST00000554028 ZNF428Q96B54 188 aa13.48□□□□□ -0.25
TMEM55B-205ENST00000554028 SLC52A2Q9HAB3 445 aa13.48□□□□□ -0.25
TMEM55B-205ENST00000554028 MIS18AQ9NYP9 233 aa13.48□□□□□ -0.25
TMEM55B-205ENST00000554028 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
TMEM55B-205ENST00000554028 TWISTNBQ3B726 338 aaPredicted RBP13.46□□□□□ -0.25
TMEM55B-205ENST00000554028 TTC5Q8N0Z6 440 aa13.46□□□□□ -0.25
TMEM55B-205ENST00000554028 ATRNO75882 1429 aa13.46□□□□□ -0.26
TMEM55B-205ENST00000554028 TNS2Q63HR2 1409 aa13.46□□□□□ -0.26
TMEM55B-205ENST00000554028 SOS1Q07889 1333 aaPredicted RBP13.45□□□□□ -0.26
TMEM55B-205ENST00000554028 DLG5Q8TDM6 1919 aa13.45□□□□□ -0.26
TMEM55B-205ENST00000554028 SLC4A2P04920 1241 aa13.45□□□□□ -0.26
TMEM55B-205ENST00000554028 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
TMEM55B-205ENST00000554028 TMOD3Q9NYL9 352 aa13.45□□□□□ -0.26
TMEM55B-205ENST00000554028 PKD1L3Q7Z443 1732 aa13.44□□□□□ -0.26
TMEM55B-205ENST00000554028 ELL2O00472 640 aaPredicted RBP13.44□□□□□ -0.26
TMEM55B-205ENST00000554028 CANXP27824 592 aaKnown RBP13.44□□□□□ -0.26
TMEM55B-205ENST00000554028 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
TMEM55B-205ENST00000554028 ONECUT3O60422 494 aaPredicted RBP13.43□□□□□ -0.26
TMEM55B-205ENST00000554028 VAMP4O75379 141 aa13.43□□□□□ -0.26
TMEM55B-205ENST00000554028 RARSP54136 660 aaKnown RBP13.43□□□□□ -0.26
TMEM55B-205ENST00000554028 RBM6P78332 1123 aaKnown RBP13.43□□□□□ -0.26
TMEM55B-205ENST00000554028 ALDH1L2Q3SY69 923 aa13.43□□□□□ -0.26
TMEM55B-205ENST00000554028 C8orf58Q8NAV2 365 aa13.43□□□□□ -0.26
TMEM55B-205ENST00000554028 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.43□□□□□ -0.26
TMEM55B-205ENST00000554028 EIF4A1P60842 406 aaKnown RBP13.42□□□□□ -0.26
TMEM55B-205ENST00000554028 ZNF790Q6PG37 636 aa13.42□□□□□ -0.26
TMEM55B-205ENST00000554028 SEPT12Q8IYM1 358 aa13.42□□□□□ -0.26
TMEM55B-205ENST00000554028 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
TMEM55B-205ENST00000554028 SYTL4Q96C24 671 aaPredicted RBP13.42□□□□□ -0.26
TMEM55B-205ENST00000554028 SMC4Q9NTJ3 1288 aa13.42□□□□□ -0.26
TMEM55B-205ENST00000554028 IPO8O15397 1037 aaKnown RBP13.41□□□□□ -0.26
TMEM55B-205ENST00000554028 HOXB7P09629 217 aa13.41□□□□□ -0.26
TMEM55B-205ENST00000554028 RRP1P56182 461 aaKnown RBP13.41□□□□□ -0.26
TMEM55B-205ENST00000554028 CCDC30Q5VVM6 783 aa13.41□□□□□ -0.26
TMEM55B-205ENST00000554028 TSPYL6Q8N831 410 aa13.41□□□□□ -0.26
TMEM55B-205ENST00000554028 FMNL2Q96PY5 1086 aa13.41□□□□□ -0.26
TMEM55B-205ENST00000554028 STK31Q9BXU1 1019 aa13.41□□□□□ -0.26
TMEM55B-205ENST00000554028 MS4A1P11836 297 aa13.4□□□□□ -0.26
TMEM55B-205ENST00000554028 RXRBP28702 533 aa13.4□□□□□ -0.26
TMEM55B-205ENST00000554028 KIF16BQ96L93 1317 aa13.39□□□□□ -0.27
TMEM55B-205ENST00000554028 LRRC37A3O60309 1634 aa13.39□□□□□ -0.27
TMEM55B-205ENST00000554028 BCAR3O75815 825 aa13.39□□□□□ -0.27
TMEM55B-205ENST00000554028 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
TMEM55B-205ENST00000554028 SLC39A6Q13433 755 aa13.39□□□□□ -0.27
TMEM55B-205ENST00000554028 SSH1Q8WYL5 1049 aa13.39□□□□□ -0.27
TMEM55B-205ENST00000554028 FRAT1Q92837 279 aaPredicted RBP13.39□□□□□ -0.27
TMEM55B-205ENST00000554028 RNF123Q5XPI4 1314 aa13.39□□□□□ -0.27
TMEM55B-205ENST00000554028 MRC1P22897 1456 aa13.38□□□□□ -0.27
TMEM55B-205ENST00000554028 KCNQ3O43525 872 aa13.38□□□□□ -0.27
TMEM55B-205ENST00000554028 SNRPA1P09661 255 aaKnown RBP13.38□□□□□ -0.27
TMEM55B-205ENST00000554028 KRT24Q2M2I5 525 aa13.38□□□□□ -0.27
TMEM55B-205ENST00000554028 HDGFL1Q5TGJ6 251 aa13.38□□□□□ -0.27
TMEM55B-205ENST00000554028 PIGBQ92521 554 aa13.38□□□□□ -0.27
TMEM55B-205ENST00000554028 BCL2L13Q9BXK5 485 aa13.38□□□□□ -0.27
TMEM55B-205ENST00000554028 ADAMTS7Q9UKP4 1686 aa13.37□□□□□ -0.27
TMEM55B-205ENST00000554028 GIGYF1O75420 1035 aaPredicted RBP13.37□□□□□ -0.27
TMEM55B-205ENST00000554028 ZKSCAN2Q63HK3 967 aa13.37□□□□□ -0.27
TMEM55B-205ENST00000554028 ACSBG1Q96GR2 724 aa13.37□□□□□ -0.27
TMEM55B-205ENST00000554028 GLI3P10071 1580 aa13.37□□□□□ -0.27
TMEM55B-205ENST00000554028 EIF2S2P20042 333 aaKnown RBP13.36□□□□□ -0.27
TMEM55B-205ENST00000554028 BRPF1P55201 1214 aaPredicted RBP13.36□□□□□ -0.27
TMEM55B-205ENST00000554028 FKBP8Q14318 412 aa13.36□□□□□ -0.27
TMEM55B-205ENST00000554028 KRT27Q7Z3Y8 459 aa13.36□□□□□ -0.27
TMEM55B-205ENST00000554028 SMARCC1Q92922 1105 aaPredicted RBP13.36□□□□□ -0.27
TMEM55B-205ENST00000554028 ZNF496Q96IT1 587 aaPredicted RBP13.36□□□□□ -0.27
TMEM55B-205ENST00000554028 TEX13AQ9BXU3 409 aaPredicted RBP13.36□□□□□ -0.27
TMEM55B-205ENST00000554028 SCN11AQ9UI33 1791 aa13.35□□□□□ -0.27
TMEM55B-205ENST00000554028 WNK3Q9BYP7 1800 aa13.35□□□□□ -0.27
TMEM55B-205ENST00000554028 PLIN1O60240 522 aa13.35□□□□□ -0.27
TMEM55B-205ENST00000554028 PTCD1O75127 700 aaKnown RBP13.35□□□□□ -0.27
TMEM55B-205ENST00000554028 PDE3AQ14432 1141 aa13.35□□□□□ -0.27
TMEM55B-205ENST00000554028 ERICH6BQ5W0A0 696 aa13.35□□□□□ -0.27
TMEM55B-205ENST00000554028 MRPL50Q8N5N7 158 aaKnown RBP13.35□□□□□ -0.27
TMEM55B-205ENST00000554028 NOB1Q9ULX3 412 aaKnown RBP13.35□□□□□ -0.27
TMEM55B-205ENST00000554028 GTF3C3Q9Y5Q9 886 aa13.35□□□□□ -0.27
TMEM55B-205ENST00000554028 BCL9O00512 1426 aa13.34□□□□□ -0.27
TMEM55B-205ENST00000554028 TCERG1O14776 1098 aaKnown RBP13.34□□□□□ -0.27
TMEM55B-205ENST00000554028 FAM196AQ6ZSG2 479 aa13.34□□□□□ -0.27
TMEM55B-205ENST00000554028 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
TMEM55B-205ENST00000554028 ARHGAP45Q92619 1136 aa13.34□□□□□ -0.27
TMEM55B-205ENST00000554028 NECTIN2Q92692 538 aa13.34□□□□□ -0.27
TMEM55B-205ENST00000554028 API5Q9BZZ5 524 aaKnown RBP13.34□□□□□ -0.27
TMEM55B-205ENST00000554028 ATG3Q9NT62 314 aa13.34□□□□□ -0.27
TMEM55B-205ENST00000554028 DBF4Q9UBU7 674 aaPredicted RBP13.34□□□□□ -0.27
TMEM55B-205ENST00000554028 ASAP1Q9ULH1 1129 aa13.34□□□□□ -0.27
TMEM55B-205ENST00000554028 HEG1Q9ULI3 1381 aa13.33□□□□□ -0.27
TMEM55B-205ENST00000554028 SAMD1Q6SPF0 538 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms