RNA–Protein interactions for RNA: ENST00000553831.5

PRKCH-207, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-207ENST00000553831 PRKAR2BP31323 418 aa19.04■□□□□ 0.64
PRKCH-207ENST00000553831 U2AF1Q01081 240 aaKnown RBP eCLIP19.04■□□□□ 0.64
PRKCH-207ENST00000553831 NFATC2IPQ8NCF5 419 aa19.04■□□□□ 0.64
PRKCH-207ENST00000553831 LGR6Q9HBX8 967 aa19.04■□□□□ 0.64
PRKCH-207ENST00000553831 ADAMTS7Q9UKP4 1686 aa19.04■□□□□ 0.64
PRKCH-207ENST00000553831 PTGER2P43116 358 aa19.03■□□□□ 0.64
PRKCH-207ENST00000553831 ITPK1Q13572 414 aa19.03■□□□□ 0.64
PRKCH-207ENST00000553831 RALBP1Q15311 655 aa19.03■□□□□ 0.64
PRKCH-207ENST00000553831 LINC00116Q8NCU8 138 aa19.03■□□□□ 0.64
PRKCH-207ENST00000553831 GAS2L2Q8NHY3 880 aa19.03■□□□□ 0.64
PRKCH-207ENST00000553831 ATP6V1AP38606 617 aa19.02■□□□□ 0.64
PRKCH-207ENST00000553831 SLC52A2Q9HAB3 445 aa19.02■□□□□ 0.64
PRKCH-207ENST00000553831 PPP1R1BQ9UD71 204 aaPredicted RBP19.02■□□□□ 0.64
PRKCH-207ENST00000553831 MAP3K5Q99683 1374 aa19.02■□□□□ 0.64
PRKCH-207ENST00000553831 HMGB2P26583 209 aaKnown RBP19.01■□□□□ 0.63
PRKCH-207ENST00000553831 PHACTR3Q96KR7 559 aa19.01■□□□□ 0.63
PRKCH-207ENST00000553831 AK7Q96M32 723 aa19.01■□□□□ 0.63
PRKCH-207ENST00000553831 SLC4A9Q96Q91 983 aa19.01■□□□□ 0.63
PRKCH-207ENST00000553831 RBM42Q9BTD8 480 aaKnown RBP19.01■□□□□ 0.63
PRKCH-207ENST00000553831 VIRMAQ69YN4 1812 aaKnown RBP19.01■□□□□ 0.63
PRKCH-207ENST00000553831 SGIP1Q9BQI5 828 aa19■□□□□ 0.63
PRKCH-207ENST00000553831 ZNF831Q5JPB2 1677 aa18.99■□□□□ 0.63
PRKCH-207ENST00000553831 FCHSD2O94868 740 aa18.99■□□□□ 0.63
PRKCH-207ENST00000553831 AMIGO3Q86WK7 504 aa18.99■□□□□ 0.63
PRKCH-207ENST00000553831 COL23A1Q86Y22 540 aaPredicted RBP18.99■□□□□ 0.63
PRKCH-207ENST00000553831 SLC16A10Q8TF71 515 aa18.99■□□□□ 0.63
PRKCH-207ENST00000553831 GNAT3A8MTJ3 354 aa18.98■□□□□ 0.63
PRKCH-207ENST00000553831 MSH5O43196 834 aa18.98■□□□□ 0.63
PRKCH-207ENST00000553831 PTCD1O75127 700 aaKnown RBP18.98■□□□□ 0.63
PRKCH-207ENST00000553831 UBR3Q6ZT12 1888 aa18.98■□□□□ 0.63
PRKCH-207ENST00000553831 MYBBP1AQ9BQG0 1328 aaKnown RBP18.98■□□□□ 0.63
PRKCH-207ENST00000553831 PHF14O94880 888 aa18.96■□□□□ 0.63
PRKCH-207ENST00000553831 SMIM5Q71RC9 77 aa18.96■□□□□ 0.63
PRKCH-207ENST00000553831 IL17REQ8NFR9 667 aa18.96■□□□□ 0.63
PRKCH-207ENST00000553831 COL5A3P25940 1745 aaPredicted RBP18.96■□□□□ 0.63
PRKCH-207ENST00000553831 COL24A1Q17RW2 1714 aa18.95■□□□□ 0.62
PRKCH-207ENST00000553831 GNPATO15228 680 aa18.95■□□□□ 0.62
PRKCH-207ENST00000553831 SLC39A6Q13433 755 aa18.95■□□□□ 0.62
PRKCH-207ENST00000553831 FLAD1Q8NFF5 587 aa18.95■□□□□ 0.62
PRKCH-207ENST00000553831 KCPQ6ZWJ8 1503 aa18.95■□□□□ 0.62
PRKCH-207ENST00000553831 TJP1Q07157 1748 aa18.94■□□□□ 0.62
PRKCH-207ENST00000553831 CICQ96RK0 1608 aaPredicted RBP18.94■□□□□ 0.62
PRKCH-207ENST00000553831 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.94■□□□□ 0.62
PRKCH-207ENST00000553831 SSFA2P28290 1259 aa18.94■□□□□ 0.62
PRKCH-207ENST00000553831 CEMIPQ8WUJ3 1361 aa18.93■□□□□ 0.62
PRKCH-207ENST00000553831 MSL1Q68DK7 614 aa18.93■□□□□ 0.62
PRKCH-207ENST00000553831 PRKRIP1Q9H875 184 aaPredicted RBP18.93■□□□□ 0.62
PRKCH-207ENST00000553831 CNTNAP4Q9C0A0 1308 aa18.93■□□□□ 0.62
PRKCH-207ENST00000553831 SIPA1L3O60292 1781 aaPredicted RBP18.92■□□□□ 0.62
PRKCH-207ENST00000553831 TEFQ10587 303 aa18.92■□□□□ 0.62
PRKCH-207ENST00000553831 ARXQ96QS3 562 aa18.92■□□□□ 0.62
PRKCH-207ENST00000553831 POLD1P28340 1107 aa18.91■□□□□ 0.62
PRKCH-207ENST00000553831 PLEKHF1Q96S99 279 aa18.91■□□□□ 0.62
PRKCH-207ENST00000553831 ZNF316A6NFI3 1004 aaPredicted RBP18.9■□□□□ 0.62
PRKCH-207ENST00000553831 RC3H1Q5TC82 1133 aaKnown RBP18.9■□□□□ 0.62
PRKCH-207ENST00000553831 FHDC1Q9C0D6 1143 aaPredicted RBP18.9■□□□□ 0.62
PRKCH-207ENST00000553831 UBR2Q8IWV8 1755 aa18.9■□□□□ 0.62
PRKCH-207ENST00000553831 MYH14Q7Z406 1995 aaKnown RBP18.9■□□□□ 0.62
PRKCH-207ENST00000553831 NEFMP07197 916 aa18.89■□□□□ 0.61
PRKCH-207ENST00000553831 CRKLP46109 303 aaKnown RBP18.89■□□□□ 0.61
PRKCH-207ENST00000553831 MCM10Q7L590 875 aa18.89■□□□□ 0.61
PRKCH-207ENST00000553831 DNAJC10Q8IXB1 793 aa18.89■□□□□ 0.61
PRKCH-207ENST00000553831 RTF1Q92541 710 aaKnown RBP18.89■□□□□ 0.61
PRKCH-207ENST00000553831 RTCBQ9Y3I0 505 aaKnown RBP18.89■□□□□ 0.61
PRKCH-207ENST00000553831 TTC5Q8N0Z6 440 aa18.88■□□□□ 0.61
PRKCH-207ENST00000553831 DCTN1Q14203 1278 aa18.87■□□□□ 0.61
PRKCH-207ENST00000553831 SYT17Q9BSW7 474 aa18.87■□□□□ 0.61
PRKCH-207ENST00000553831 MAPK8IP3Q9UPT6 1336 aa18.86■□□□□ 0.61
PRKCH-207ENST00000553831 HTATSF1O43719 755 aaKnown RBP18.86■□□□□ 0.61
PRKCH-207ENST00000553831 RPS6KA4O75676 772 aa18.86■□□□□ 0.61
PRKCH-207ENST00000553831 ZNF790Q6PG37 636 aa18.86■□□□□ 0.61
PRKCH-207ENST00000553831 PNNQ9H307 717 aaKnown RBP18.86■□□□□ 0.61
PRKCH-207ENST00000553831 BTBD11A6QL63 1104 aa18.85■□□□□ 0.61
PRKCH-207ENST00000553831 ADRA2BP18089 450 aa18.85■□□□□ 0.61
PRKCH-207ENST00000553831 NFE2L2Q16236 605 aa18.85■□□□□ 0.61
PRKCH-207ENST00000553831 TRAPPC3LQ5T215 181 aa18.85■□□□□ 0.61
PRKCH-207ENST00000553831 VSIG10Q8N0Z9 540 aa18.85■□□□□ 0.61
PRKCH-207ENST00000553831 KLHL34Q8N239 644 aa18.85■□□□□ 0.61
PRKCH-207ENST00000553831 ZNF496Q96IT1 587 aaPredicted RBP18.85■□□□□ 0.61
PRKCH-207ENST00000553831 DLG5Q8TDM6 1919 aa18.84■□□□□ 0.61
PRKCH-207ENST00000553831 CYP19A1P11511 503 aaPredicted RBP18.84■□□□□ 0.61
PRKCH-207ENST00000553831 INTS5Q6P9B9 1019 aaKnown RBP18.84■□□□□ 0.61
PRKCH-207ENST00000553831 ARHGEF1Q92888 912 aaKnown RBP18.84■□□□□ 0.61
PRKCH-207ENST00000553831 CCDC87Q9NVE4 849 aa18.84■□□□□ 0.61
PRKCH-207ENST00000553831 C4AP0C0L4 1744 aa18.83■□□□□ 0.61
PRKCH-207ENST00000553831 HEG1Q9ULI3 1381 aa18.83■□□□□ 0.61
PRKCH-207ENST00000553831 KCNQ3O43525 872 aa18.83■□□□□ 0.6
PRKCH-207ENST00000553831 WDR43Q15061 677 aaKnown RBP eCLIP18.82■□□□□ 0.6
PRKCH-207ENST00000553831 SOS1Q07889 1333 aaPredicted RBP18.81■□□□□ 0.6
PRKCH-207ENST00000553831 RFC4P35249 363 aa18.81■□□□□ 0.6
PRKCH-207ENST00000553831 FMNL2Q96PY5 1086 aa18.81■□□□□ 0.6
PRKCH-207ENST00000553831 ZBTB1Q9Y2K1 713 aa18.81■□□□□ 0.6
PRKCH-207ENST00000553831 CCDC146Q8IYE0 955 aa18.8■□□□□ 0.6
PRKCH-207ENST00000553831 UTRNP46939 3433 aa18.8■□□□□ 0.6
PRKCH-207ENST00000553831 GYS1P13807 737 aa18.79■□□□□ 0.6
PRKCH-207ENST00000553831 THUMPD2Q9BTF0 503 aaKnown RBP18.79■□□□□ 0.6
PRKCH-207ENST00000553831 SRP68Q9UHB9 627 aaKnown RBP18.79■□□□□ 0.6
PRKCH-207ENST00000553831 USP42Q9H9J4 1324 aaKnown RBP18.78■□□□□ 0.6
PRKCH-207ENST00000553831 STARD3NLO95772 234 aa18.78■□□□□ 0.6
PRKCH-207ENST00000553831 TAF7Q15545 349 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms