RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ASAP1Q9ULH1 1129 aa21.65■■□□□ 1.06
ACTN1-209ENST00000553659 GOLGB1Q14789 3259 aaKnown RBP21.64■■□□□ 1.06
ACTN1-209ENST00000553659 KIF7Q2M1P5 1343 aa21.64■■□□□ 1.05
ACTN1-209ENST00000553659 EIF4A2Q14240 407 aaKnown RBP21.64■■□□□ 1.05
ACTN1-209ENST00000553659 POLR3GLQ9BT43 218 aa21.64■■□□□ 1.05
ACTN1-209ENST00000553659 PLEKHG2Q9H7P9 1386 aa21.62■■□□□ 1.05
ACTN1-209ENST00000553659 ATP6V1AP38606 617 aa21.62■■□□□ 1.05
ACTN1-209ENST00000553659 TNNT2P45379 298 aaPredicted RBP21.62■■□□□ 1.05
ACTN1-209ENST00000553659 ITPK1Q13572 414 aa21.62■■□□□ 1.05
ACTN1-209ENST00000553659 YTHDC1Q96MU7 727 aaKnown RBP21.62■■□□□ 1.05
ACTN1-209ENST00000553659 ATG3Q9NT62 314 aa21.62■■□□□ 1.05
ACTN1-209ENST00000553659 GNPATO15228 680 aa21.6■■□□□ 1.05
ACTN1-209ENST00000553659 ZNF831Q5JPB2 1677 aa21.59■■□□□ 1.05
ACTN1-209ENST00000553659 IGSF1Q8N6C5 1336 aa21.58■■□□□ 1.05
ACTN1-209ENST00000553659 ATP10DQ9P241 1426 aa21.58■■□□□ 1.05
ACTN1-209ENST00000553659 ERVV-2B6SEH9 535 aa21.58■■□□□ 1.05
ACTN1-209ENST00000553659 PANK3Q9H999 370 aa21.57■■□□□ 1.04
ACTN1-209ENST00000553659 HSP90AB1P08238 724 aaKnown RBP21.56■■□□□ 1.04
ACTN1-209ENST00000553659 KIF13BQ9NQT8 1826 aa21.55■■□□□ 1.04
ACTN1-209ENST00000553659 PLEKHO1Q53GL0 409 aaPredicted RBP21.55■■□□□ 1.04
ACTN1-209ENST00000553659 DCAF5Q96JK2 942 aa21.55■■□□□ 1.04
ACTN1-209ENST00000553659 KDRP35968 1356 aa21.54■■□□□ 1.04
ACTN1-209ENST00000553659 TRAPPC3LQ5T215 181 aa21.54■■□□□ 1.04
ACTN1-209ENST00000553659 GPBP1L1Q9HC44 474 aaPredicted RBP21.54■■□□□ 1.04
ACTN1-209ENST00000553659 RTCBQ9Y3I0 505 aaKnown RBP21.54■■□□□ 1.04
ACTN1-209ENST00000553659 ADCY9O60503 1353 aa21.53■■□□□ 1.04
ACTN1-209ENST00000553659 COL5A3P25940 1745 aaPredicted RBP21.53■■□□□ 1.04
ACTN1-209ENST00000553659 MMP10P09238 476 aa21.53■■□□□ 1.04
ACTN1-209ENST00000553659 SLC4A9Q96Q91 983 aa21.53■■□□□ 1.04
ACTN1-209ENST00000553659 RBM42Q9BTD8 480 aaKnown RBP21.53■■□□□ 1.04
ACTN1-209ENST00000553659 WWC3Q9ULE0 1092 aa21.53■■□□□ 1.04
ACTN1-209ENST00000553659 AMOTQ4VCS5 1084 aa21.52■■□□□ 1.04
ACTN1-209ENST00000553659 RC3H1Q5TC82 1133 aaKnown RBP21.52■■□□□ 1.04
ACTN1-209ENST00000553659 MYH14Q7Z406 1995 aaKnown RBP21.51■■□□□ 1.03
ACTN1-209ENST00000553659 NLGN1Q8N2Q7 840 aa21.51■■□□□ 1.03
ACTN1-209ENST00000553659 ADRA2BP18089 450 aa21.5■■□□□ 1.03
ACTN1-209ENST00000553659 CABP4P57796 275 aa21.5■■□□□ 1.03
ACTN1-209ENST00000553659 ZNF530Q6P9A1 599 aaPredicted RBP21.5■■□□□ 1.03
ACTN1-209ENST00000553659 N4BP2Q86UW6 1770 aaPredicted RBP21.5■■□□□ 1.03
ACTN1-209ENST00000553659 KDM6AO15550 1401 aaPredicted RBP21.49■■□□□ 1.03
ACTN1-209ENST00000553659 MORC1Q86VD1 984 aa21.49■■□□□ 1.03
ACTN1-209ENST00000553659 ARHGEF1Q92888 912 aaKnown RBP21.49■■□□□ 1.03
ACTN1-209ENST00000553659 CNTNAP4Q9C0A0 1308 aa21.49■■□□□ 1.03
ACTN1-209ENST00000553659 KIAA1551Q9HCM1 1747 aa21.49■■□□□ 1.03
ACTN1-209ENST00000553659 RPS6KA4O75676 772 aa21.48■■□□□ 1.03
ACTN1-209ENST00000553659 MTHFSP49914 203 aa21.48■■□□□ 1.03
ACTN1-209ENST00000553659 TGFB2P61812 414 aa21.48■■□□□ 1.03
ACTN1-209ENST00000553659 ZNF526Q8TF50 670 aaPredicted RBP21.48■■□□□ 1.03
ACTN1-209ENST00000553659 CICQ96RK0 1608 aaPredicted RBP21.47■■□□□ 1.03
ACTN1-209ENST00000553659 PXDNLA1KZ92 1463 aa21.46■■□□□ 1.03
ACTN1-209ENST00000553659 RFC4P35249 363 aa21.46■■□□□ 1.03
ACTN1-209ENST00000553659 C1orf141Q5JVX7 400 aa21.46■■□□□ 1.03
ACTN1-209ENST00000553659 AEBP1Q8IUX7 1158 aa21.46■■□□□ 1.03
ACTN1-209ENST00000553659 GYS1P13807 737 aa21.45■■□□□ 1.02
ACTN1-209ENST00000553659 PRKRIP1Q9H875 184 aaPredicted RBP21.45■■□□□ 1.02
ACTN1-209ENST00000553659 C4AP0C0L4 1744 aa21.45■■□□□ 1.02
ACTN1-209ENST00000553659 SCN11AQ9UI33 1791 aa21.45■■□□□ 1.02
ACTN1-209ENST00000553659 SULT6B1Q6IMI4 303 aa21.44■■□□□ 1.02
ACTN1-209ENST00000553659 NFATC2IPQ8NCF5 419 aa21.44■■□□□ 1.02
ACTN1-209ENST00000553659 BRCA1P38398 1863 aaKnown RBP21.43■■□□□ 1.02
ACTN1-209ENST00000553659 A0A0G2JLW4 131 aa21.43■■□□□ 1.02
ACTN1-209ENST00000553659 CCDC87Q9NVE4 849 aa21.43■■□□□ 1.02
ACTN1-209ENST00000553659 KNSTRNQ9Y448 316 aa21.43■■□□□ 1.02
ACTN1-209ENST00000553659 C10orf71Q711Q0 1435 aa21.43■■□□□ 1.02
ACTN1-209ENST00000553659 PTCD1O75127 700 aaKnown RBP21.42■■□□□ 1.02
ACTN1-209ENST00000553659 IL13P35225 146 aa21.42■■□□□ 1.02
ACTN1-209ENST00000553659 PARP3Q9Y6F1 533 aa21.42■■□□□ 1.02
ACTN1-209ENST00000553659 BCS1LQ9Y276 419 aa21.41■■□□□ 1.02
ACTN1-209ENST00000553659 VIRMAQ69YN4 1812 aaKnown RBP21.41■■□□□ 1.02
ACTN1-209ENST00000553659 HSPA6P17066 643 aa21.4■■□□□ 1.02
ACTN1-209ENST00000553659 CRKLP46109 303 aaKnown RBP21.4■■□□□ 1.02
ACTN1-209ENST00000553659 TJP1Q07157 1748 aa21.4■■□□□ 1.02
ACTN1-209ENST00000553659 DPEP1P16444 411 aa21.39■■□□□ 1.01
ACTN1-209ENST00000553659 ARFGEF1Q9Y6D6 1849 aa21.39■■□□□ 1.01
ACTN1-209ENST00000553659 KIF3CO14782 793 aa21.38■■□□□ 1.01
ACTN1-209ENST00000553659 AKAP4Q5JQC9 854 aa21.37■■□□□ 1.01
ACTN1-209ENST00000553659 ARHGAP27Q6ZUM4 889 aa21.37■■□□□ 1.01
ACTN1-209ENST00000553659 FCHSD2O94868 740 aa21.36■■□□□ 1.01
ACTN1-209ENST00000553659 AMER1Q5JTC6 1135 aaPredicted RBP21.36■■□□□ 1.01
ACTN1-209ENST00000553659 USP42Q9H9J4 1324 aaKnown RBP21.35■■□□□ 1.01
ACTN1-209ENST00000553659 KCNA3P22001 575 aa21.35■■□□□ 1.01
ACTN1-209ENST00000553659 SRP68Q9UHB9 627 aaKnown RBP21.35■■□□□ 1.01
ACTN1-209ENST00000553659 FKBP8Q14318 412 aa21.34■■□□□ 1.01
ACTN1-209ENST00000553659 INTS5Q6P9B9 1019 aaKnown RBP21.34■■□□□ 1.01
ACTN1-209ENST00000553659 SLC52A2Q9HAB3 445 aa21.34■■□□□ 1.01
ACTN1-209ENST00000553659 ADAMTS7Q9UKP4 1686 aa21.34■■□□□ 1.01
ACTN1-209ENST00000553659 RALBP1Q15311 655 aa21.33■■□□□ 1.01
ACTN1-209ENST00000553659 LGR6Q9HBX8 967 aa21.33■■□□□ 1.01
ACTN1-209ENST00000553659 PIM2Q9P1W9 311 aa21.33■■□□□ 1.01
ACTN1-209ENST00000553659 DDR1Q08345 913 aa21.31■■□□□ 1
ACTN1-209ENST00000553659 DNAJC10Q8IXB1 793 aa21.31■■□□□ 1
ACTN1-209ENST00000553659 CEP350Q5VT06 3117 aa21.31■■□□□ 1
ACTN1-209ENST00000553659 RNMTO43148 476 aaKnown RBP21.3■■□□□ 1
ACTN1-209ENST00000553659 TM4SF1P30408 202 aa21.3■■□□□ 1
ACTN1-209ENST00000553659 SBF1O95248 1867 aa21.29■■□□□ 1
ACTN1-209ENST00000553659 MRC1P22897 1456 aa21.29■■□□□ 1
ACTN1-209ENST00000553659 ZPR1O75312 459 aa21.29■■□□□ 1
ACTN1-209ENST00000553659 TOMM70O94826 608 aa21.29■■□□□ 1
ACTN1-209ENST00000553659 HMOX1P09601 288 aa21.29■■□□□ 1
ACTN1-209ENST00000553659 DALRD3Q5D0E6 543 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms