RNA–Protein interactions for RNA: ENST00000553649.2

SMARCE1P3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 3, humanhuman

BASIC

Gene SMARCE1P3, Length 1,231 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1P3-201ENST00000553649 BRWD3Q6RI45 1802 aa8.78□□□□□ -1
SMARCE1P3-201ENST00000553649 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.78□□□□□ -1
SMARCE1P3-201ENST00000553649 PXYLP1Q8TE99 480 aa8.78□□□□□ -1
SMARCE1P3-201ENST00000553649 ARHGEF1Q92888 912 aaKnown RBP8.78□□□□□ -1
SMARCE1P3-201ENST00000553649 AMOTL2Q9Y2J4 779 aa8.78□□□□□ -1
SMARCE1P3-201ENST00000553649 TRPM2O94759 1503 aa8.78□□□□□ -1
SMARCE1P3-201ENST00000553649 RIMS2Q9UQ26 1411 aa8.78□□□□□ -1
SMARCE1P3-201ENST00000553649 NUTM2FA1L443 756 aa8.77□□□□□ -1.01
SMARCE1P3-201ENST00000553649 RPIAP49247 311 aa8.77□□□□□ -1.01
SMARCE1P3-201ENST00000553649 PLCB2Q00722 1185 aa8.77□□□□□ -1.01
SMARCE1P3-201ENST00000553649 EZH2Q15910 746 aaKnown RBP8.77□□□□□ -1.01
SMARCE1P3-201ENST00000553649 KCNV2Q8TDN2 545 aa8.77□□□□□ -1.01
SMARCE1P3-201ENST00000553649 THAP11Q96EK4 314 aa8.77□□□□□ -1.01
SMARCE1P3-201ENST00000553649 C1orf167Q5SNV9 1468 aa8.77□□□□□ -1.01
SMARCE1P3-201ENST00000553649 CFAP65Q6ZU64 1925 aaKnown RBP8.76□□□□□ -1.01
SMARCE1P3-201ENST00000553649 KIF15Q9NS87 1388 aa8.76□□□□□ -1.01
SMARCE1P3-201ENST00000553649 C11orf95C9JLR9 678 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1P3-201ENST00000553649 AXIN1O15169 862 aa8.76□□□□□ -1.01
SMARCE1P3-201ENST00000553649 FAM160A2Q8N612 972 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1P3-201ENST00000553649 PPP1R1BQ9UD71 204 aaPredicted RBP8.76□□□□□ -1.01
SMARCE1P3-201ENST00000553649 FCF1Q9Y324 198 aaKnown RBP8.76□□□□□ -1.01
SMARCE1P3-201ENST00000553649 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.76□□□□□ -1.01
SMARCE1P3-201ENST00000553649 RPRD2Q5VT52 1461 aaKnown RBP8.76□□□□□ -1.01
SMARCE1P3-201ENST00000553649 GIGYF1O75420 1035 aaPredicted RBP8.75□□□□□ -1.01
SMARCE1P3-201ENST00000553649 MORN1Q5T089 497 aa8.75□□□□□ -1.01
SMARCE1P3-201ENST00000553649 CAMKK2Q96RR4 588 aa8.75□□□□□ -1.01
SMARCE1P3-201ENST00000553649 SPON1Q9HCB6 807 aa8.75□□□□□ -1.01
SMARCE1P3-201ENST00000553649 ADGRL3Q9HAR2 1447 aa8.74□□□□□ -1.01
SMARCE1P3-201ENST00000553649 WIPF1O43516 503 aa8.74□□□□□ -1.01
SMARCE1P3-201ENST00000553649 KCNQ2O43526 872 aa8.74□□□□□ -1.01
SMARCE1P3-201ENST00000553649 SMCPP49901 116 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1P3-201ENST00000553649 VPS72Q15906 364 aa8.74□□□□□ -1.01
SMARCE1P3-201ENST00000553649 ORAI2Q96SN7 254 aa8.74□□□□□ -1.01
SMARCE1P3-201ENST00000553649 XRN1Q8IZH2 1706 aaKnown RBP8.74□□□□□ -1.01
SMARCE1P3-201ENST00000553649 TMEM131LA2VDJ0 1609 aa8.73□□□□□ -1.01
SMARCE1P3-201ENST00000553649 CYP4X1Q8N118 509 aa8.73□□□□□ -1.01
SMARCE1P3-201ENST00000553649 PRDM9Q9NQV7 894 aa8.73□□□□□ -1.01
SMARCE1P3-201ENST00000553649 KANK1Q14678 1352 aa8.73□□□□□ -1.01
SMARCE1P3-201ENST00000553649 MYOM3Q5VTT5 1437 aa8.72□□□□□ -1.01
SMARCE1P3-201ENST00000553649 CTC1Q2NKJ3 1217 aa8.72□□□□□ -1.01
SMARCE1P3-201ENST00000553649 KANK4Q5T7N3 995 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1P3-201ENST00000553649 METTL3Q86U44 580 aaKnown RBP8.72□□□□□ -1.01
SMARCE1P3-201ENST00000553649 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.72□□□□□ -1.01
SMARCE1P3-201ENST00000553649 RRP7BPQ9NSQ0 103 aa8.72□□□□□ -1.01
SMARCE1P3-201ENST00000553649 FCHSD2O94868 740 aa8.71□□□□□ -1.02
SMARCE1P3-201ENST00000553649 CD2BP2O95400 341 aaKnown RBP8.71□□□□□ -1.02
SMARCE1P3-201ENST00000553649 FUT2Q10981 343 aa8.71□□□□□ -1.02
SMARCE1P3-201ENST00000553649 FAM182BQ5T319 152 aa8.71□□□□□ -1.02
SMARCE1P3-201ENST00000553649 TSHZ2Q9NRE2 1034 aa8.71□□□□□ -1.02
SMARCE1P3-201ENST00000553649 OATP04181 439 aa8.7□□□□□ -1.02
SMARCE1P3-201ENST00000553649 SNRPBP14678 240 aaKnown RBP8.7□□□□□ -1.02
SMARCE1P3-201ENST00000553649 STK17AQ9UEE5 414 aa8.7□□□□□ -1.02
SMARCE1P3-201ENST00000553649 SLC27A5Q9Y2P5 690 aa8.7□□□□□ -1.02
SMARCE1P3-201ENST00000553649 RGPD1P0DJD0 1748 aa8.7□□□□□ -1.02
SMARCE1P3-201ENST00000553649 PXDNQ92626 1479 aa8.7□□□□□ -1.02
SMARCE1P3-201ENST00000553649 TNS1Q9HBL0 1735 aaKnown RBP8.69□□□□□ -1.02
SMARCE1P3-201ENST00000553649 MARF1Q9Y4F3 1742 aaKnown RBP8.69□□□□□ -1.02
SMARCE1P3-201ENST00000553649 LOC105371045A0A1W2PR82 267 aa8.69□□□□□ -1.02
SMARCE1P3-201ENST00000553649 SMPD1P17405 629 aa8.69□□□□□ -1.02
SMARCE1P3-201ENST00000553649 PARD3Q8TEW0 1356 aa8.69□□□□□ -1.02
SMARCE1P3-201ENST00000553649 ABCC5O15440 1437 aa8.69□□□□□ -1.02
SMARCE1P3-201ENST00000553649 PTPN23Q9H3S7 1636 aa8.69□□□□□ -1.02
SMARCE1P3-201ENST00000553649 FECHP22830 423 aa8.68□□□□□ -1.02
SMARCE1P3-201ENST00000553649 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
SMARCE1P3-201ENST00000553649 CHIC2Q9UKJ5 165 aa8.68□□□□□ -1.02
SMARCE1P3-201ENST00000553649 PRAG1Q86YV5 1406 aa8.68□□□□□ -1.02
SMARCE1P3-201ENST00000553649 VPS8Q8N3P4 1428 aa8.68□□□□□ -1.02
SMARCE1P3-201ENST00000553649 NRXN3Q9Y4C0 1643 aa8.68□□□□□ -1.02
SMARCE1P3-201ENST00000553649 GCC2Q8IWJ2 1684 aa8.68□□□□□ -1.02
SMARCE1P3-201ENST00000553649 CROCC2H7BZ55 1655 aa8.67□□□□□ -1.02
SMARCE1P3-201ENST00000553649 NALCNQ8IZF0 1738 aa8.67□□□□□ -1.02
SMARCE1P3-201ENST00000553649 ATP13A2Q9NQ11 1180 aa8.67□□□□□ -1.02
SMARCE1P3-201ENST00000553649 NRKQ7Z2Y5 1582 aa8.66□□□□□ -1.02
SMARCE1P3-201ENST00000553649 METP08581 1390 aa8.66□□□□□ -1.02
SMARCE1P3-201ENST00000553649 TTC24A2A3L6 582 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1P3-201ENST00000553649 NBPF8Q3BBV2 869 aa8.66□□□□□ -1.02
SMARCE1P3-201ENST00000553649 NBPF14Q5TI25 921 aa8.66□□□□□ -1.02
SMARCE1P3-201ENST00000553649 BRICD5Q6PL45 260 aa8.66□□□□□ -1.02
SMARCE1P3-201ENST00000553649 CCDC9Q9Y3X0 531 aaKnown RBP8.66□□□□□ -1.02
SMARCE1P3-201ENST00000553649 MYO5BQ9ULV0 1848 aa8.66□□□□□ -1.02
SMARCE1P3-201ENST00000553649 ADGRB2O60241 1585 aa8.65□□□□□ -1.02
SMARCE1P3-201ENST00000553649 ADGRL2O95490 1459 aa8.65□□□□□ -1.02
SMARCE1P3-201ENST00000553649 SEMA3EO15041 775 aa8.65□□□□□ -1.02
SMARCE1P3-201ENST00000553649 FMNL1O95466 1100 aaPredicted RBP8.65□□□□□ -1.02
SMARCE1P3-201ENST00000553649 HSPA6P17066 643 aa8.65□□□□□ -1.02
SMARCE1P3-201ENST00000553649 ATP6V1AP38606 617 aa8.65□□□□□ -1.02
SMARCE1P3-201ENST00000553649 XPCQ01831 940 aaPredicted RBP8.65□□□□□ -1.02
SMARCE1P3-201ENST00000553649 RREB1Q92766 1687 aa8.65□□□□□ -1.03
SMARCE1P3-201ENST00000553649 USP32Q8NFA0 1604 aa8.65□□□□□ -1.03
SMARCE1P3-201ENST00000553649 NPHP3Q7Z494 1330 aa8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 LOC100996750A0A140TA64 210 aa8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 J3QL48 77 aa8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 WNT7AO00755 349 aa8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 TERTO14746 1132 aaKnown RBP8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 TRIM37O94972 964 aa8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 APBA3O96018 575 aa8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 PRELPP51888 382 aa8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 INSM1Q01101 510 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 RNF19BQ6ZMZ0 732 aa8.64□□□□□ -1.03
SMARCE1P3-201ENST00000553649 RDH13Q8NBN7 331 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms