RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 FANCIQ9NVI1 1328 aa12.68□□□□□ -0.38
CHD8-204ENST00000553622 TAF7Q15545 349 aaPredicted RBP12.68□□□□□ -0.38
CHD8-204ENST00000553622 POTEAQ6S8J7 498 aa12.68□□□□□ -0.38
CHD8-204ENST00000553622 CFAP44Q96MT7 982 aa12.68□□□□□ -0.38
CHD8-204ENST00000553622 BTBD11A6QL63 1104 aa12.67□□□□□ -0.38
CHD8-204ENST00000553622 NKX1-1Q15270 411 aaPredicted RBP12.67□□□□□ -0.38
CHD8-204ENST00000553622 FAM182BQ5T319 152 aa12.67□□□□□ -0.38
CHD8-204ENST00000553622 NFATC2IPQ8NCF5 419 aa12.67□□□□□ -0.38
CHD8-204ENST00000553622 ACSBG1Q96GR2 724 aa12.67□□□□□ -0.38
CHD8-204ENST00000553622 SLC52A2Q9HAB3 445 aa12.67□□□□□ -0.38
CHD8-204ENST00000553622 MBIPQ9NS73 344 aa12.67□□□□□ -0.38
CHD8-204ENST00000553622 TMOD3Q9NYL9 352 aa12.67□□□□□ -0.38
CHD8-204ENST00000553622 MRC1P22897 1456 aa12.66□□□□□ -0.38
CHD8-204ENST00000553622 ERVV-2B6SEH9 535 aa12.66□□□□□ -0.38
CHD8-204ENST00000553622 ONECUT3O60422 494 aaPredicted RBP12.66□□□□□ -0.38
CHD8-204ENST00000553622 DUSP27Q5VZP5 1158 aa12.66□□□□□ -0.38
CHD8-204ENST00000553622 BTAF1O14981 1849 aa12.65□□□□□ -0.38
CHD8-204ENST00000553622 CHL1O00533 1208 aa12.65□□□□□ -0.38
CHD8-204ENST00000553622 ZNF853P0CG23 659 aa12.65□□□□□ -0.38
CHD8-204ENST00000553622 KRT27Q7Z3Y8 459 aa12.65□□□□□ -0.38
CHD8-204ENST00000553622 NHSQ6T4R5 1651 aa12.64□□□□□ -0.39
CHD8-204ENST00000553622 PAPPAQ13219 1627 aa12.64□□□□□ -0.39
CHD8-204ENST00000553622 PRIM1P49642 420 aaKnown RBP12.64□□□□□ -0.39
CHD8-204ENST00000553622 EXOSC9Q06265 439 aaKnown RBP12.64□□□□□ -0.39
CHD8-204ENST00000553622 SLC39A6Q13433 755 aa12.64□□□□□ -0.39
CHD8-204ENST00000553622 UBR2Q8IWV8 1755 aa12.64□□□□□ -0.39
CHD8-204ENST00000553622 RGS12O14924 1447 aa12.63□□□□□ -0.39
CHD8-204ENST00000553622 ELL2O00472 640 aaPredicted RBP12.63□□□□□ -0.39
CHD8-204ENST00000553622 KCNQ3O43525 872 aa12.63□□□□□ -0.39
CHD8-204ENST00000553622 TRMT2AQ8IZ69 625 aaKnown RBP12.63□□□□□ -0.39
CHD8-204ENST00000553622 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
CHD8-204ENST00000553622 C5P01031 1676 aa12.63□□□□□ -0.39
CHD8-204ENST00000553622 CACNA1FO60840 1977 aa12.63□□□□□ -0.39
CHD8-204ENST00000553622 BABAM1Q9NWV8 329 aa12.62□□□□□ -0.39
CHD8-204ENST00000553622 KRT24Q2M2I5 525 aa12.61□□□□□ -0.39
CHD8-204ENST00000553622 PIGBQ92521 554 aa12.61□□□□□ -0.39
CHD8-204ENST00000553622 LAMB4A4D0S4 1761 aa12.61□□□□□ -0.39
CHD8-204ENST00000553622 KCNQ2O43526 872 aa12.6□□□□□ -0.39
CHD8-204ENST00000553622 TWISTNBQ3B726 338 aaPredicted RBP12.6□□□□□ -0.39
CHD8-204ENST00000553622 ZNF790Q6PG37 636 aa12.6□□□□□ -0.39
CHD8-204ENST00000553622 TSPYL6Q8N831 410 aa12.6□□□□□ -0.39
CHD8-204ENST00000553622 C8orf58Q8NAV2 365 aa12.6□□□□□ -0.39
CHD8-204ENST00000553622 RCAN3Q9UKA8 241 aa12.6□□□□□ -0.39
CHD8-204ENST00000553622 BCL9O00512 1426 aa12.6□□□□□ -0.39
CHD8-204ENST00000553622 PTCD1O75127 700 aaKnown RBP12.59□□□□□ -0.39
CHD8-204ENST00000553622 EIF4A1P60842 406 aaKnown RBP12.59□□□□□ -0.39
CHD8-204ENST00000553622 FAM196AQ6ZSG2 479 aa12.59□□□□□ -0.39
CHD8-204ENST00000553622 ASAP1Q9ULH1 1129 aa12.59□□□□□ -0.39
CHD8-204ENST00000553622 TCERG1O14776 1098 aaKnown RBP12.58□□□□□ -0.4
CHD8-204ENST00000553622 NECTIN2Q92692 538 aa12.58□□□□□ -0.4
CHD8-204ENST00000553622 FMNL2Q96PY5 1086 aa12.58□□□□□ -0.4
CHD8-204ENST00000553622 RBM42Q9BTD8 480 aaKnown RBP12.58□□□□□ -0.4
CHD8-204ENST00000553622 KCPQ6ZWJ8 1503 aa12.57□□□□□ -0.4
CHD8-204ENST00000553622 EIF2S2P20042 333 aaKnown RBP12.57□□□□□ -0.4
CHD8-204ENST00000553622 ZNF496Q96IT1 587 aaPredicted RBP12.57□□□□□ -0.4
CHD8-204ENST00000553622 BCL2L13Q9BXK5 485 aa12.57□□□□□ -0.4
CHD8-204ENST00000553622 ATG3Q9NT62 314 aa12.57□□□□□ -0.4
CHD8-204ENST00000553622 VAMP4O75379 141 aa12.56□□□□□ -0.4
CHD8-204ENST00000553622 TRIM37O94972 964 aa12.56□□□□□ -0.4
CHD8-204ENST00000553622 CT47B1P0C2W7 299 aaPredicted RBP12.56□□□□□ -0.4
CHD8-204ENST00000553622 PTF1AQ7RTS3 328 aa12.56□□□□□ -0.4
CHD8-204ENST00000553622 LY75O60449 1722 aa12.55□□□□□ -0.4
CHD8-204ENST00000553622 TJP1Q07157 1748 aa12.55□□□□□ -0.4
CHD8-204ENST00000553622 CANXP27824 592 aaKnown RBP12.55□□□□□ -0.4
CHD8-204ENST00000553622 SMARCC1Q92922 1105 aaPredicted RBP12.55□□□□□ -0.4
CHD8-204ENST00000553622 SMC4Q9NTJ3 1288 aa12.55□□□□□ -0.4
CHD8-204ENST00000553622 SUPT16HQ9Y5B9 1047 aaKnown RBP12.55□□□□□ -0.4
CHD8-204ENST00000553622 PALLDQ8WX93 1383 aa12.55□□□□□ -0.4
CHD8-204ENST00000553622 HEG1Q9ULI3 1381 aa12.55□□□□□ -0.4
CHD8-204ENST00000553622 TNS1Q9HBL0 1735 aaKnown RBP12.54□□□□□ -0.4
CHD8-204ENST00000553622 TAF1LQ8IZX4 1826 aa12.54□□□□□ -0.4
CHD8-204ENST00000553622 PRAMEF22A3QJZ6 481 aa12.54□□□□□ -0.4
CHD8-204ENST00000553622 GIGYF1O75420 1035 aaPredicted RBP12.54□□□□□ -0.4
CHD8-204ENST00000553622 SNRPA1P09661 255 aaKnown RBP12.54□□□□□ -0.4
CHD8-204ENST00000553622 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
CHD8-204ENST00000553622 BCL11BQ9C0K0 894 aaPredicted RBP12.54□□□□□ -0.4
CHD8-204ENST00000553622 BCAR3O75815 825 aa12.53□□□□□ -0.4
CHD8-204ENST00000553622 RARSP54136 660 aaKnown RBP12.53□□□□□ -0.4
CHD8-204ENST00000553622 CCDC30Q5VVM6 783 aa12.53□□□□□ -0.4
CHD8-204ENST00000553622 SSH1Q8WYL5 1049 aa12.53□□□□□ -0.4
CHD8-204ENST00000553622 STK31Q9BXU1 1019 aa12.53□□□□□ -0.4
CHD8-204ENST00000553622 HOXB7P09629 217 aa12.52□□□□□ -0.41
CHD8-204ENST00000553622 FRAT1Q92837 279 aaPredicted RBP12.52□□□□□ -0.41
CHD8-204ENST00000553622 SOS1Q07889 1333 aaPredicted RBP12.52□□□□□ -0.41
CHD8-204ENST00000553622 COL5A3P25940 1745 aaPredicted RBP12.51□□□□□ -0.41
CHD8-204ENST00000553622 LOC102724428A0A0B4J2F2 783 aa12.51□□□□□ -0.41
CHD8-204ENST00000553622 ATP6V1AP38606 617 aa12.51□□□□□ -0.41
CHD8-204ENST00000553622 SIK1P57059 783 aa12.51□□□□□ -0.41
CHD8-204ENST00000553622 ALDH1L2Q3SY69 923 aa12.51□□□□□ -0.41
CHD8-204ENST00000553622 DNAJC10Q8IXB1 793 aa12.51□□□□□ -0.41
CHD8-204ENST00000553622 ZNF428Q96B54 188 aa12.51□□□□□ -0.41
CHD8-204ENST00000553622 MYH14Q7Z406 1995 aaKnown RBP12.5□□□□□ -0.41
CHD8-204ENST00000553622 PLIN1O60240 522 aa12.5□□□□□ -0.41
CHD8-204ENST00000553622 KCNQ4P56696 695 aa12.5□□□□□ -0.41
CHD8-204ENST00000553622 CHMP4AQ9BY43 222 aa12.5□□□□□ -0.41
CHD8-204ENST00000553622 CHPF2Q9P2E5 772 aa12.5□□□□□ -0.41
CHD8-204ENST00000553622 USP16Q9Y5T5 823 aa12.5□□□□□ -0.41
CHD8-204ENST00000553622 ZNF831Q5JPB2 1677 aa12.5□□□□□ -0.41
CHD8-204ENST00000553622 STARD3NLO95772 234 aa12.49□□□□□ -0.41
CHD8-204ENST00000553622 APBA3O96018 575 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms