RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 UBR3Q6ZT12 1888 aa20.57■□□□□ 0.88
SDR39U1-205ENST00000553546 KDRP35968 1356 aa20.57■□□□□ 0.88
SDR39U1-205ENST00000553546 ASAP1Q9ULH1 1129 aa20.56■□□□□ 0.88
SDR39U1-205ENST00000553546 ATP10DQ9P241 1426 aa20.55■□□□□ 0.88
SDR39U1-205ENST00000553546 YBX3P16989 372 aaKnown RBP eCLIP20.55■□□□□ 0.88
SDR39U1-205ENST00000553546 C1orf141Q5JVX7 400 aa20.55■□□□□ 0.88
SDR39U1-205ENST00000553546 SULT6B1Q6IMI4 303 aa20.55■□□□□ 0.88
SDR39U1-205ENST00000553546 PER1O15534 1290 aaPredicted RBP20.54■□□□□ 0.88
SDR39U1-205ENST00000553546 SSFA2P28290 1259 aa20.54■□□□□ 0.88
SDR39U1-205ENST00000553546 IL13P35225 146 aa20.54■□□□□ 0.88
SDR39U1-205ENST00000553546 ATP6V1AP38606 617 aa20.54■□□□□ 0.88
SDR39U1-205ENST00000553546 AEBP1Q8IUX7 1158 aa20.54■□□□□ 0.88
SDR39U1-205ENST00000553546 ATG3Q9NT62 314 aa20.54■□□□□ 0.88
SDR39U1-205ENST00000553546 ZNF831Q5JPB2 1677 aa20.54■□□□□ 0.88
SDR39U1-205ENST00000553546 LINC00116Q8NCU8 138 aa20.53■□□□□ 0.88
SDR39U1-205ENST00000553546 KDM6AO15550 1401 aaPredicted RBP20.53■□□□□ 0.88
SDR39U1-205ENST00000553546 NPC1L1Q9UHC9 1359 aa20.52■□□□□ 0.88
SDR39U1-205ENST00000553546 MTHFSP49914 203 aa20.52■□□□□ 0.88
SDR39U1-205ENST00000553546 MSL1Q68DK7 614 aa20.52■□□□□ 0.88
SDR39U1-205ENST00000553546 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.51■□□□□ 0.87
SDR39U1-205ENST00000553546 PHF14O94880 888 aa20.51■□□□□ 0.87
SDR39U1-205ENST00000553546 CABP4P57796 275 aa20.51■□□□□ 0.87
SDR39U1-205ENST00000553546 ITPK1Q13572 414 aa20.5■□□□□ 0.87
SDR39U1-205ENST00000553546 CC2D1BQ5T0F9 858 aaKnown RBP20.5■□□□□ 0.87
SDR39U1-205ENST00000553546 GNPATO15228 680 aa20.49■□□□□ 0.87
SDR39U1-205ENST00000553546 ADCY9O60503 1353 aa20.48■□□□□ 0.87
SDR39U1-205ENST00000553546 RBM42Q9BTD8 480 aaKnown RBP20.48■□□□□ 0.87
SDR39U1-205ENST00000553546 SCN11AQ9UI33 1791 aa20.47■□□□□ 0.87
SDR39U1-205ENST00000553546 AMIGO3Q86WK7 504 aa20.47■□□□□ 0.87
SDR39U1-205ENST00000553546 CD2APQ9Y5K6 639 aa20.47■□□□□ 0.87
SDR39U1-205ENST00000553546 COL5A3P25940 1745 aaPredicted RBP20.47■□□□□ 0.87
SDR39U1-205ENST00000553546 DIAPH1O60610 1272 aaKnown RBP20.46■□□□□ 0.87
SDR39U1-205ENST00000553546 AKAP4Q5JQC9 854 aa20.46■□□□□ 0.87
SDR39U1-205ENST00000553546 GRIN3BO60391 1043 aa20.45■□□□□ 0.86
SDR39U1-205ENST00000553546 RC3H1Q5TC82 1133 aaKnown RBP20.45■□□□□ 0.86
SDR39U1-205ENST00000553546 RTCBQ9Y3I0 505 aaKnown RBP20.45■□□□□ 0.86
SDR39U1-205ENST00000553546 CNTNAP4Q9C0A0 1308 aa20.45■□□□□ 0.86
SDR39U1-205ENST00000553546 HSPA6P17066 643 aa20.44■□□□□ 0.86
SDR39U1-205ENST00000553546 HMOX1P09601 288 aa20.43■□□□□ 0.86
SDR39U1-205ENST00000553546 ADRA2BP18089 450 aa20.43■□□□□ 0.86
SDR39U1-205ENST00000553546 NFATC2IPQ8NCF5 419 aa20.43■□□□□ 0.86
SDR39U1-205ENST00000553546 SLC4A9Q96Q91 983 aa20.43■□□□□ 0.86
SDR39U1-205ENST00000553546 CICQ96RK0 1608 aaPredicted RBP20.42■□□□□ 0.86
SDR39U1-205ENST00000553546 TRAPPC3LQ5T215 181 aa20.42■□□□□ 0.86
SDR39U1-205ENST00000553546 SMIM5Q71RC9 77 aa20.42■□□□□ 0.86
SDR39U1-205ENST00000553546 GPBP1L1Q9HC44 474 aaPredicted RBP20.41■□□□□ 0.86
SDR39U1-205ENST00000553546 MRC1P22897 1456 aa20.41■□□□□ 0.86
SDR39U1-205ENST00000553546 PTCD1O75127 700 aaKnown RBP20.4■□□□□ 0.86
SDR39U1-205ENST00000553546 COL3A1P02461 1466 aaPredicted RBP20.4■□□□□ 0.86
SDR39U1-205ENST00000553546 VIRMAQ69YN4 1812 aaKnown RBP20.4■□□□□ 0.86
SDR39U1-205ENST00000553546 RPS6KA4O75676 772 aa20.39■□□□□ 0.85
SDR39U1-205ENST00000553546 ZNF526Q8TF50 670 aaPredicted RBP20.39■□□□□ 0.85
SDR39U1-205ENST00000553546 SLC52A2Q9HAB3 445 aa20.39■□□□□ 0.85
SDR39U1-205ENST00000553546 NLGN1Q8N2Q7 840 aa20.38■□□□□ 0.85
SDR39U1-205ENST00000553546 ADAMTS7Q9UKP4 1686 aa20.38■□□□□ 0.85
SDR39U1-205ENST00000553546 MYH14Q7Z406 1995 aaKnown RBP20.37■□□□□ 0.85
SDR39U1-205ENST00000553546 TJP1Q07157 1748 aa20.37■□□□□ 0.85
SDR39U1-205ENST00000553546 RNMTO43148 476 aaKnown RBP20.37■□□□□ 0.85
SDR39U1-205ENST00000553546 CNGB1Q14028 1251 aaPredicted RBP20.37■□□□□ 0.85
SDR39U1-205ENST00000553546 U2SURPO15042 1029 aaKnown RBP20.36■□□□□ 0.85
SDR39U1-205ENST00000553546 RFC4P35249 363 aa20.36■□□□□ 0.85
SDR39U1-205ENST00000553546 MTHFSDQ2M296 383 aaKnown RBP20.36■□□□□ 0.85
SDR39U1-205ENST00000553546 ARHGEF1Q92888 912 aaKnown RBP20.36■□□□□ 0.85
SDR39U1-205ENST00000553546 CFAP53Q96M91 514 aa20.36■□□□□ 0.85
SDR39U1-205ENST00000553546 C4AP0C0L4 1744 aa20.36■□□□□ 0.85
SDR39U1-205ENST00000553546 MMP10P09238 476 aa20.35■□□□□ 0.85
SDR39U1-205ENST00000553546 CRKLP46109 303 aaKnown RBP20.35■□□□□ 0.85
SDR39U1-205ENST00000553546 LGR6Q9HBX8 967 aa20.35■□□□□ 0.85
SDR39U1-205ENST00000553546 KIF13BQ9NQT8 1826 aa20.33■□□□□ 0.85
SDR39U1-205ENST00000553546 GAS2L2Q8NHY3 880 aa20.33■□□□□ 0.85
SDR39U1-205ENST00000553546 GYS1P13807 737 aa20.32■□□□□ 0.84
SDR39U1-205ENST00000553546 KIF3CO14782 793 aa20.3■□□□□ 0.84
SDR39U1-205ENST00000553546 CCDC87Q9NVE4 849 aa20.3■□□□□ 0.84
SDR39U1-205ENST00000553546 NUDCQ9Y266 331 aa20.3■□□□□ 0.84
SDR39U1-205ENST00000553546 KCPQ6ZWJ8 1503 aa20.3■□□□□ 0.84
SDR39U1-205ENST00000553546 C10orf71Q711Q0 1435 aa20.29■□□□□ 0.84
SDR39U1-205ENST00000553546 UBR2Q8IWV8 1755 aa20.29■□□□□ 0.84
SDR39U1-205ENST00000553546 GNAT3A8MTJ3 354 aa20.29■□□□□ 0.84
SDR39U1-205ENST00000553546 DNAJC10Q8IXB1 793 aa20.29■□□□□ 0.84
SDR39U1-205ENST00000553546 PARP3Q9Y6F1 533 aa20.29■□□□□ 0.84
SDR39U1-205ENST00000553546 USP42Q9H9J4 1324 aaKnown RBP20.28■□□□□ 0.84
SDR39U1-205ENST00000553546 TGFB2P61812 414 aa20.28■□□□□ 0.84
SDR39U1-205ENST00000553546 SLC39A6Q13433 755 aa20.28■□□□□ 0.84
SDR39U1-205ENST00000553546 INTS5Q6P9B9 1019 aaKnown RBP20.28■□□□□ 0.84
SDR39U1-205ENST00000553546 VSIG10Q8N0Z9 540 aa20.28■□□□□ 0.84
SDR39U1-205ENST00000553546 WWC3Q9ULE0 1092 aa20.28■□□□□ 0.84
SDR39U1-205ENST00000553546 PXDNLA1KZ92 1463 aa20.27■□□□□ 0.84
SDR39U1-205ENST00000553546 TEFQ10587 303 aa20.27■□□□□ 0.84
SDR39U1-205ENST00000553546 TTC5Q8N0Z6 440 aa20.27■□□□□ 0.84
SDR39U1-205ENST00000553546 CYP19A1P11511 503 aaPredicted RBP20.26■□□□□ 0.83
SDR39U1-205ENST00000553546 PPP2R1AP30153 589 aa20.26■□□□□ 0.83
SDR39U1-205ENST00000553546 KIAA1551Q9HCM1 1747 aa20.25■□□□□ 0.83
SDR39U1-205ENST00000553546 PRKAR2BP31323 418 aa20.25■□□□□ 0.83
SDR39U1-205ENST00000553546 SOS1Q07889 1333 aaPredicted RBP20.25■□□□□ 0.83
SDR39U1-205ENST00000553546 WDR90Q96KV7 1748 aa20.24■□□□□ 0.83
SDR39U1-205ENST00000553546 SIPA1L3O60292 1781 aaPredicted RBP20.24■□□□□ 0.83
SDR39U1-205ENST00000553546 ZPR1O75312 459 aa20.24■□□□□ 0.83
SDR39U1-205ENST00000553546 RSPH6AQ9H0K4 717 aa20.24■□□□□ 0.83
SDR39U1-205ENST00000553546 SRP68Q9UHB9 627 aaKnown RBP20.24■□□□□ 0.83
SDR39U1-205ENST00000553546 N4BP2Q86UW6 1770 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms