RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 MAP3K5Q99683 1374 aa11.03□□□□□ -0.64
PCNX1-204ENST00000553428 ITGB4P16144 1822 aa11.03□□□□□ -0.64
PCNX1-204ENST00000553428 ATP6V1AP38606 617 aa11.03□□□□□ -0.64
PCNX1-204ENST00000553428 LGR6Q9HBX8 967 aa11.03□□□□□ -0.64
PCNX1-204ENST00000553428 MRC1P22897 1456 aa11.03□□□□□ -0.64
PCNX1-204ENST00000553428 PNPLA7Q6ZV29 1317 aa11.03□□□□□ -0.64
PCNX1-204ENST00000553428 CASZ1Q86V15 1759 aa11.03□□□□□ -0.64
PCNX1-204ENST00000553428 ZNF316A6NFI3 1004 aaPredicted RBP11.02□□□□□ -0.65
PCNX1-204ENST00000553428 HTATSF1O43719 755 aaKnown RBP11.02□□□□□ -0.65
PCNX1-204ENST00000553428 ZBTB7AO95365 584 aa11.02□□□□□ -0.65
PCNX1-204ENST00000553428 PHACTR3Q96KR7 559 aa11.02□□□□□ -0.65
PCNX1-204ENST00000553428 AK7Q96M32 723 aa11.02□□□□□ -0.65
PCNX1-204ENST00000553428 PDGFDQ9GZP0 370 aaPredicted RBP11.02□□□□□ -0.65
PCNX1-204ENST00000553428 PPP1R1BQ9UD71 204 aaPredicted RBP11.02□□□□□ -0.65
PCNX1-204ENST00000553428 SSFA2P28290 1259 aa11.01□□□□□ -0.65
PCNX1-204ENST00000553428 TEFQ10587 303 aa11.01□□□□□ -0.65
PCNX1-204ENST00000553428 ITPK1Q13572 414 aa11.01□□□□□ -0.65
PCNX1-204ENST00000553428 RC3H1Q5TC82 1133 aaKnown RBP11.01□□□□□ -0.65
PCNX1-204ENST00000553428 LINC00116Q8NCU8 138 aa11.01□□□□□ -0.65
PCNX1-204ENST00000553428 RBM42Q9BTD8 480 aaKnown RBP11.01□□□□□ -0.65
PCNX1-204ENST00000553428 PRKRIP1Q9H875 184 aaPredicted RBP11.01□□□□□ -0.65
PCNX1-204ENST00000553428 CEMIPQ8WUJ3 1361 aa11.01□□□□□ -0.65
PCNX1-204ENST00000553428 PTGER2P43116 358 aa11□□□□□ -0.65
PCNX1-204ENST00000553428 IL17REQ8NFR9 667 aa11□□□□□ -0.65
PCNX1-204ENST00000553428 RTF1Q92541 710 aaKnown RBP11□□□□□ -0.65
PCNX1-204ENST00000553428 SGIP1Q9BQI5 828 aa11□□□□□ -0.65
PCNX1-204ENST00000553428 ATF5Q9Y2D1 282 aaPredicted RBP11□□□□□ -0.65
PCNX1-204ENST00000553428 ZNF831Q5JPB2 1677 aa11□□□□□ -0.65
PCNX1-204ENST00000553428 ADAMTS7Q9UKP4 1686 aa11□□□□□ -0.65
PCNX1-204ENST00000553428 CNTNAP4Q9C0A0 1308 aa11□□□□□ -0.65
PCNX1-204ENST00000553428 QSER1Q2KHR3 1735 aa11□□□□□ -0.65
PCNX1-204ENST00000553428 C5P01031 1676 aa10.99□□□□□ -0.65
PCNX1-204ENST00000553428 PTCD1O75127 700 aaKnown RBP10.99□□□□□ -0.65
PCNX1-204ENST00000553428 ADRA2BP18089 450 aa10.99□□□□□ -0.65
PCNX1-204ENST00000553428 POLD1P28340 1107 aa10.99□□□□□ -0.65
PCNX1-204ENST00000553428 COL23A1Q86Y22 540 aaPredicted RBP10.99□□□□□ -0.65
PCNX1-204ENST00000553428 SLC4A9Q96Q91 983 aa10.99□□□□□ -0.65
PCNX1-204ENST00000553428 C4BP0C0L5 1744 aa10.98□□□□□ -0.65
PCNX1-204ENST00000553428 SCN11AQ9UI33 1791 aa10.98□□□□□ -0.65
PCNX1-204ENST00000553428 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
PCNX1-204ENST00000553428 GNPATO15228 680 aa10.98□□□□□ -0.65
PCNX1-204ENST00000553428 TTC5Q8N0Z6 440 aa10.98□□□□□ -0.65
PCNX1-204ENST00000553428 VSIG10Q8N0Z9 540 aa10.98□□□□□ -0.65
PCNX1-204ENST00000553428 PLEKHF1Q96S99 279 aa10.98□□□□□ -0.65
PCNX1-204ENST00000553428 RTCBQ9Y3I0 505 aaKnown RBP10.98□□□□□ -0.65
PCNX1-204ENST00000553428 MAPK8IP3Q9UPT6 1336 aa10.98□□□□□ -0.65
PCNX1-204ENST00000553428 MSH5O43196 834 aa10.97□□□□□ -0.65
PCNX1-204ENST00000553428 RPS6KA4O75676 772 aa10.97□□□□□ -0.65
PCNX1-204ENST00000553428 SLC39A6Q13433 755 aa10.97□□□□□ -0.65
PCNX1-204ENST00000553428 ZNF790Q6PG37 636 aa10.97□□□□□ -0.65
PCNX1-204ENST00000553428 WDR43Q15061 677 aaKnown RBP eCLIP10.96□□□□□ -0.65
PCNX1-204ENST00000553428 NFE2L2Q16236 605 aa10.96□□□□□ -0.65
PCNX1-204ENST00000553428 ARXQ96QS3 562 aa10.96□□□□□ -0.65
PCNX1-204ENST00000553428 TEX13AQ9BXU3 409 aaPredicted RBP10.96□□□□□ -0.65
PCNX1-204ENST00000553428 TAF1LQ8IZX4 1826 aa10.95□□□□□ -0.66
PCNX1-204ENST00000553428 CICQ96RK0 1608 aaPredicted RBP10.95□□□□□ -0.66
PCNX1-204ENST00000553428 PHF14O94880 888 aa10.95□□□□□ -0.66
PCNX1-204ENST00000553428 CRKLP46109 303 aaKnown RBP10.95□□□□□ -0.66
PCNX1-204ENST00000553428 TRAPPC3LQ5T215 181 aa10.95□□□□□ -0.66
PCNX1-204ENST00000553428 KCPQ6ZWJ8 1503 aa10.94□□□□□ -0.66
PCNX1-204ENST00000553428 BTBD11A6QL63 1104 aa10.94□□□□□ -0.66
PCNX1-204ENST00000553428 STARD3NLO95772 234 aa10.94□□□□□ -0.66
PCNX1-204ENST00000553428 LMOD3Q0VAK6 560 aa10.94□□□□□ -0.66
PCNX1-204ENST00000553428 MCM10Q7L590 875 aa10.94□□□□□ -0.66
PCNX1-204ENST00000553428 AMIGO3Q86WK7 504 aa10.94□□□□□ -0.66
PCNX1-204ENST00000553428 DNAJC10Q8IXB1 793 aa10.94□□□□□ -0.66
PCNX1-204ENST00000553428 PNISRQ8TF01 805 aaKnown RBP10.94□□□□□ -0.66
PCNX1-204ENST00000553428 FMNL2Q96PY5 1086 aa10.94□□□□□ -0.66
PCNX1-204ENST00000553428 CCDC87Q9NVE4 849 aa10.94□□□□□ -0.66
PCNX1-204ENST00000553428 HEG1Q9ULI3 1381 aa10.93□□□□□ -0.66
PCNX1-204ENST00000553428 DCAF8L1A6NGE4 600 aa10.93□□□□□ -0.66
PCNX1-204ENST00000553428 CYP19A1P11511 503 aaPredicted RBP10.93□□□□□ -0.66
PCNX1-204ENST00000553428 TAF7Q15545 349 aaPredicted RBP10.93□□□□□ -0.66
PCNX1-204ENST00000553428 RUNDC1Q96C34 613 aa10.93□□□□□ -0.66
PCNX1-204ENST00000553428 ZNF496Q96IT1 587 aaPredicted RBP10.93□□□□□ -0.66
PCNX1-204ENST00000553428 SYT17Q9BSW7 474 aa10.93□□□□□ -0.66
PCNX1-204ENST00000553428 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
PCNX1-204ENST00000553428 ANP32CO43423 234 aa10.92□□□□□ -0.66
PCNX1-204ENST00000553428 RFC4P35249 363 aa10.92□□□□□ -0.66
PCNX1-204ENST00000553428 INTS5Q6P9B9 1019 aaKnown RBP10.92□□□□□ -0.66
PCNX1-204ENST00000553428 NLGN1Q8N2Q7 840 aa10.92□□□□□ -0.66
PCNX1-204ENST00000553428 ARHGEF1Q92888 912 aaKnown RBP10.92□□□□□ -0.66
PCNX1-204ENST00000553428 TUBGCP6Q96RT7 1819 aa10.92□□□□□ -0.66
PCNX1-204ENST00000553428 COL24A1Q17RW2 1714 aa10.92□□□□□ -0.66
PCNX1-204ENST00000553428 UBR3Q6ZT12 1888 aa10.91□□□□□ -0.66
PCNX1-204ENST00000553428 TMPOP42166 694 aaKnown RBP10.91□□□□□ -0.66
PCNX1-204ENST00000553428 RIPK4P57078 832 aa10.91□□□□□ -0.66
PCNX1-204ENST00000553428 DCTN1Q14203 1278 aa10.91□□□□□ -0.66
PCNX1-204ENST00000553428 MSL1Q68DK7 614 aa10.91□□□□□ -0.66
PCNX1-204ENST00000553428 BABAM1Q9NWV8 329 aa10.91□□□□□ -0.66
PCNX1-204ENST00000553428 ADAMTS8Q9UP79 889 aa10.91□□□□□ -0.66
PCNX1-204ENST00000553428 COL5A3P25940 1745 aaPredicted RBP10.91□□□□□ -0.66
PCNX1-204ENST00000553428 SOS1Q07889 1333 aaPredicted RBP10.9□□□□□ -0.66
PCNX1-204ENST00000553428 A0A087WZG4 1122 aa10.9□□□□□ -0.66
PCNX1-204ENST00000553428 SNRPA1P09661 255 aaKnown RBP10.9□□□□□ -0.66
PCNX1-204ENST00000553428 SMIM5Q71RC9 77 aa10.9□□□□□ -0.66
PCNX1-204ENST00000553428 CD2APQ9Y5K6 639 aa10.9□□□□□ -0.66
PCNX1-204ENST00000553428 UBR2Q8IWV8 1755 aa10.9□□□□□ -0.67
PCNX1-204ENST00000553428 TJP1Q07157 1748 aa10.89□□□□□ -0.67
PCNX1-204ENST00000553428 USP42Q9H9J4 1324 aaKnown RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms