RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 WDR43Q15061 677 aaKnown RBP eCLIP6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 C8orf34Q49A92 452 aa6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 HSCBQ8IWL3 235 aa6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 BCL11BQ9C0K0 894 aaPredicted RBP6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 TSPYL1Q9H0U9 437 aa6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 PPP1R1BQ9UD71 204 aaPredicted RBP6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 THRAP3Q9Y2W1 955 aaKnown RBP6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 RGPD2P0DJD1 1756 aa6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 CASZ1Q86V15 1759 aa6.99□□□□□ -1.29
TMEM106C-221ENST00000553217 A0A1W2PP64 1363 aa6.98□□□□□ -1.29
TMEM106C-221ENST00000553217 OFD1O75665 1012 aa6.98□□□□□ -1.29
TMEM106C-221ENST00000553217 LETM1O95202 739 aaPredicted RBP6.98□□□□□ -1.29
TMEM106C-221ENST00000553217 SLC4A2P04920 1241 aa6.98□□□□□ -1.29
TMEM106C-221ENST00000553217 MCM4P33991 863 aa6.98□□□□□ -1.29
TMEM106C-221ENST00000553217 NBPF14Q5TI25 921 aa6.98□□□□□ -1.29
TMEM106C-221ENST00000553217 RWDD1Q9H446 243 aaPredicted RBP6.98□□□□□ -1.29
TMEM106C-221ENST00000553217 GRPEL1Q9HAV7 217 aa6.98□□□□□ -1.29
TMEM106C-221ENST00000553217 NLRP2Q9NX02 1062 aa6.98□□□□□ -1.29
TMEM106C-221ENST00000553217 SBNO2Q9Y2G9 1366 aa6.97□□□□□ -1.29
TMEM106C-221ENST00000553217 TPM3P06753 285 aa6.97□□□□□ -1.29
TMEM106C-221ENST00000553217 CNGB1Q14028 1251 aaPredicted RBP6.97□□□□□ -1.29
TMEM106C-221ENST00000553217 TNS2Q63HR2 1409 aa6.97□□□□□ -1.29
TMEM106C-221ENST00000553217 PDCL2Q8N4E4 241 aa6.97□□□□□ -1.29
TMEM106C-221ENST00000553217 USHBP1Q8N6Y0 703 aa6.97□□□□□ -1.29
TMEM106C-221ENST00000553217 ANKRD24Q8TF21 1146 aa6.97□□□□□ -1.29
TMEM106C-221ENST00000553217 SNX21Q969T3 373 aa6.97□□□□□ -1.29
TMEM106C-221ENST00000553217 PRIMPOLQ96LW4 560 aa6.97□□□□□ -1.29
TMEM106C-221ENST00000553217 BTAF1O14981 1849 aa6.97□□□□□ -1.29
TMEM106C-221ENST00000553217 ZNF500O60304 480 aaPredicted RBP6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 TMF1P82094 1093 aa6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 TXNRD1Q16881 649 aa6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 ZNF827Q17R98 1081 aa6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 CLEC17AQ6ZS10 378 aa6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 TBC1D32Q96NH3 1257 aa6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 PPP1R9BQ96SB3 815 aa6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 CARD10Q9BWT7 1032 aa6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 SLKQ9H2G2 1235 aaPredicted RBP6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 SPON1Q9HCB6 807 aa6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 NHSQ6T4R5 1651 aa6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 ERBB3P21860 1342 aa6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 TTC21AQ8NDW8 1320 aa6.96□□□□□ -1.3
TMEM106C-221ENST00000553217 EXOC5O00471 708 aa6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 TRAK2O60296 914 aa6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 PHF14O94880 888 aa6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 PDIA4P13667 645 aaKnown RBP6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 YY1P25490 414 aa6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 RRS1Q15050 365 aaKnown RBP6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 KCNH5Q8NCM2 988 aa6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 DDX54Q8TDD1 881 aaKnown RBP6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 SYAP1Q96A49 352 aaPredicted RBP6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 ZNF692Q9BU19 519 aaPredicted RBP6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 RGPD3A6NKT7 1758 aaPredicted RBP6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 RGPD4Q7Z3J3 1758 aa6.95□□□□□ -1.3
TMEM106C-221ENST00000553217 TUBGCP6Q96RT7 1819 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 USP54Q70EL1 1684 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 DOT1LQ8TEK3 1739 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 SHANK3Q9BYB0 1731 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 ST20-MTHFSA0A0A6YYL1 179 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 XRCC6P12956 609 aaKnown RBP eCLIP6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 PTGER2P43116 358 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 NUCB2P80303 420 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 CHAF1AQ13111 956 aaPredicted RBP6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 HDGFL2Q7Z4V5 671 aaPredicted RBP6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 FAM184AQ8NB25 1140 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 ZNF428Q96B54 188 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 GGNBP2Q9H3C7 697 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 ANTXR1Q9H6X2 564 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 LRRC4BQ9NT99 713 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 STK32BQ9NY57 414 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 CCDC39Q9UFE4 941 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 PAPPAQ13219 1627 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 USP31Q70CQ4 1352 aa6.94□□□□□ -1.3
TMEM106C-221ENST00000553217 FAM208AQ9UK61 1670 aaKnown RBP6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 MEGF6O75095 1541 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 ABCC6O95255 1503 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 CCDC66A2RUB6 948 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 PLSCR1O15162 318 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 IL2RBP14784 551 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 SLC15A2Q16348 729 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 CCDC184Q52MB2 194 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 SMIM5Q71RC9 77 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 CLUAP1Q96AJ1 413 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 SYTL4Q96C24 671 aaPredicted RBP6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 TESK2Q96S53 571 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 CRBNQ96SW2 442 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 FHDC1Q9C0D6 1143 aaPredicted RBP6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 CWC22Q9HCG8 908 aaKnown RBP6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 MAP3K19Q56UN5 1328 aa6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 EDC4Q6P2E9 1401 aaKnown RBP6.93□□□□□ -1.3
TMEM106C-221ENST00000553217 KLHL40Q2TBA0 621 aa6.92□□□□□ -1.3
TMEM106C-221ENST00000553217 SASS6Q6UVJ0 657 aa6.92□□□□□ -1.3
TMEM106C-221ENST00000553217 KIAA1211Q6ZU35 1233 aa6.92□□□□□ -1.3
TMEM106C-221ENST00000553217 NOL7Q9UMY1 257 aaKnown RBP6.92□□□□□ -1.3
TMEM106C-221ENST00000553217 MBD3O95983 291 aa6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 CANXP27824 592 aaKnown RBP6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 HOXC9P31274 260 aa6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 HOXD11P31277 338 aaPredicted RBP6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 NASPP49321 788 aaPredicted RBP6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 MSL1Q68DK7 614 aa6.91□□□□□ -1.3
TMEM106C-221ENST00000553217 CAVIN1Q6NZI2 390 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms