RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 UBR2Q8IWV8 1755 aa13.48□□□□□ -0.25
CALCOCO1-222ENST00000553154 C5P01031 1676 aa13.48□□□□□ -0.25
CALCOCO1-222ENST00000553154 GNAT3A8MTJ3 354 aa13.48□□□□□ -0.25
CALCOCO1-222ENST00000553154 IFFO2Q5TF58 517 aa13.48□□□□□ -0.25
CALCOCO1-222ENST00000553154 SMARCC1Q92922 1105 aaPredicted RBP13.48□□□□□ -0.25
CALCOCO1-222ENST00000553154 QSER1Q2KHR3 1735 aa13.47□□□□□ -0.25
CALCOCO1-222ENST00000553154 KCNQ4P56696 695 aa13.47□□□□□ -0.25
CALCOCO1-222ENST00000553154 CABP4P57796 275 aa13.47□□□□□ -0.25
CALCOCO1-222ENST00000553154 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
CALCOCO1-222ENST00000553154 ADAMTS8Q9UP79 889 aa13.47□□□□□ -0.25
CALCOCO1-222ENST00000553154 TJP1Q07157 1748 aa13.47□□□□□ -0.25
CALCOCO1-222ENST00000553154 VIRMAQ69YN4 1812 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-222ENST00000553154 TAF1LQ8IZX4 1826 aa13.46□□□□□ -0.25
CALCOCO1-222ENST00000553154 LOC102724428A0A0B4J2F2 783 aa13.46□□□□□ -0.25
CALCOCO1-222ENST00000553154 HTATSF1O43719 755 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-222ENST00000553154 SIK1P57059 783 aa13.46□□□□□ -0.25
CALCOCO1-222ENST00000553154 ITPK1Q13572 414 aa13.46□□□□□ -0.25
CALCOCO1-222ENST00000553154 R3HDM1Q15032 1099 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-222ENST00000553154 NFE2L2Q16236 605 aa13.46□□□□□ -0.25
CALCOCO1-222ENST00000553154 CCNL1Q9UK58 526 aaPredicted RBP13.46□□□□□ -0.25
CALCOCO1-222ENST00000553154 C4BP0C0L5 1744 aa13.46□□□□□ -0.25
CALCOCO1-222ENST00000553154 COL5A3P25940 1745 aaPredicted RBP13.45□□□□□ -0.26
CALCOCO1-222ENST00000553154 ANP32CO43423 234 aa13.45□□□□□ -0.26
CALCOCO1-222ENST00000553154 SLC15A2Q16348 729 aa13.45□□□□□ -0.26
CALCOCO1-222ENST00000553154 PNISRQ8TF01 805 aaKnown RBP13.45□□□□□ -0.26
CALCOCO1-222ENST00000553154 TUBGCP6Q96RT7 1819 aa13.45□□□□□ -0.26
CALCOCO1-222ENST00000553154 AMIGO3Q86WK7 504 aa13.44□□□□□ -0.26
CALCOCO1-222ENST00000553154 PDGFDQ9GZP0 370 aaPredicted RBP13.44□□□□□ -0.26
CALCOCO1-222ENST00000553154 DLG5Q8TDM6 1919 aa13.43□□□□□ -0.26
CALCOCO1-222ENST00000553154 NBPF14Q5TI25 921 aa13.43□□□□□ -0.26
CALCOCO1-222ENST00000553154 LINC00116Q8NCU8 138 aa13.43□□□□□ -0.26
CALCOCO1-222ENST00000553154 CEP350Q5VT06 3117 aa13.43□□□□□ -0.26
CALCOCO1-222ENST00000553154 PNPLA7Q6ZV29 1317 aa13.42□□□□□ -0.26
CALCOCO1-222ENST00000553154 COL24A1Q17RW2 1714 aa13.42□□□□□ -0.26
CALCOCO1-222ENST00000553154 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
CALCOCO1-222ENST00000553154 DCTN1Q14203 1278 aa13.42□□□□□ -0.26
CALCOCO1-222ENST00000553154 MCM10Q7L590 875 aa13.42□□□□□ -0.26
CALCOCO1-222ENST00000553154 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
CALCOCO1-222ENST00000553154 PNNQ9H307 717 aaKnown RBP13.42□□□□□ -0.26
CALCOCO1-222ENST00000553154 STK32BQ9NY57 414 aa13.42□□□□□ -0.26
CALCOCO1-222ENST00000553154 WDR43Q15061 677 aaKnown RBP eCLIP13.41□□□□□ -0.26
CALCOCO1-222ENST00000553154 CCDC146Q8IYE0 955 aa13.41□□□□□ -0.26
CALCOCO1-222ENST00000553154 CNTNAP4Q9C0A0 1308 aa13.4□□□□□ -0.26
CALCOCO1-222ENST00000553154 MAPK8IP3Q9UPT6 1336 aa13.4□□□□□ -0.26
CALCOCO1-222ENST00000553154 KDM3BQ7LBC6 1761 aa13.4□□□□□ -0.26
CALCOCO1-222ENST00000553154 SLC39A6Q13433 755 aa13.4□□□□□ -0.26
CALCOCO1-222ENST00000553154 MRS2Q9HD23 443 aa13.4□□□□□ -0.26
CALCOCO1-222ENST00000553154 TRIM35Q9UPQ4 493 aa13.4□□□□□ -0.26
CALCOCO1-222ENST00000553154 HEG1Q9ULI3 1381 aa13.4□□□□□ -0.26
CALCOCO1-222ENST00000553154 UBR3Q6ZT12 1888 aa13.4□□□□□ -0.26
CALCOCO1-222ENST00000553154 KCNQ3O43525 872 aa13.39□□□□□ -0.27
CALCOCO1-222ENST00000553154 ZNF790Q6PG37 636 aa13.39□□□□□ -0.27
CALCOCO1-222ENST00000553154 THUMPD2Q9BTF0 503 aaKnown RBP13.39□□□□□ -0.27
CALCOCO1-222ENST00000553154 PTCD1O75127 700 aaKnown RBP13.38□□□□□ -0.27
CALCOCO1-222ENST00000553154 ATP6V1AP38606 617 aa13.38□□□□□ -0.27
CALCOCO1-222ENST00000553154 TEFQ10587 303 aa13.38□□□□□ -0.27
CALCOCO1-222ENST00000553154 VSIG10Q8N0Z9 540 aa13.38□□□□□ -0.27
CALCOCO1-222ENST00000553154 ZNF496Q96IT1 587 aaPredicted RBP13.38□□□□□ -0.27
CALCOCO1-222ENST00000553154 SGIP1Q9BQI5 828 aa13.38□□□□□ -0.27
CALCOCO1-222ENST00000553154 RIPK4P57078 832 aa13.37□□□□□ -0.27
CALCOCO1-222ENST00000553154 RC3H1Q5TC82 1133 aaKnown RBP13.37□□□□□ -0.27
CALCOCO1-222ENST00000553154 RRP7AQ9Y3A4 280 aaKnown RBP13.37□□□□□ -0.27
CALCOCO1-222ENST00000553154 NEFMP07197 916 aa13.36□□□□□ -0.27
CALCOCO1-222ENST00000553154 CYP19A1P11511 503 aaPredicted RBP13.36□□□□□ -0.27
CALCOCO1-222ENST00000553154 INTS5Q6P9B9 1019 aaKnown RBP13.36□□□□□ -0.27
CALCOCO1-222ENST00000553154 COL23A1Q86Y22 540 aaPredicted RBP13.36□□□□□ -0.27
CALCOCO1-222ENST00000553154 DNAJC10Q8IXB1 793 aa13.36□□□□□ -0.27
CALCOCO1-222ENST00000553154 RTF1Q92541 710 aaKnown RBP13.36□□□□□ -0.27
CALCOCO1-222ENST00000553154 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
CALCOCO1-222ENST00000553154 KAT6BQ8WYB5 2073 aa13.36□□□□□ -0.27
CALCOCO1-222ENST00000553154 MYH14Q7Z406 1995 aaKnown RBP13.36□□□□□ -0.27
CALCOCO1-222ENST00000553154 BTBD11A6QL63 1104 aa13.35□□□□□ -0.27
CALCOCO1-222ENST00000553154 APAF1O14727 1248 aa13.35□□□□□ -0.27
CALCOCO1-222ENST00000553154 HMGB2P26583 209 aaKnown RBP13.35□□□□□ -0.27
CALCOCO1-222ENST00000553154 PTGER2P43116 358 aa13.35□□□□□ -0.27
CALCOCO1-222ENST00000553154 TAF7Q15545 349 aaPredicted RBP13.35□□□□□ -0.27
CALCOCO1-222ENST00000553154 NCBP3Q53F19 620 aaKnown RBP13.35□□□□□ -0.27
CALCOCO1-222ENST00000553154 SSFA2P28290 1259 aa13.34□□□□□ -0.27
CALCOCO1-222ENST00000553154 CRKLP46109 303 aaKnown RBP13.34□□□□□ -0.27
CALCOCO1-222ENST00000553154 LMOD3Q0VAK6 560 aa13.34□□□□□ -0.27
CALCOCO1-222ENST00000553154 SMIM5Q71RC9 77 aa13.34□□□□□ -0.27
CALCOCO1-222ENST00000553154 TFCP2L1Q9NZI6 479 aa13.34□□□□□ -0.27
CALCOCO1-222ENST00000553154 UTRNP46939 3433 aa13.34□□□□□ -0.27
CALCOCO1-222ENST00000553154 C4AP0C0L4 1744 aa13.33□□□□□ -0.27
CALCOCO1-222ENST00000553154 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
CALCOCO1-222ENST00000553154 CCER2I3L3R5 266 aa13.33□□□□□ -0.28
CALCOCO1-222ENST00000553154 RPS6KA4O75676 772 aa13.33□□□□□ -0.28
CALCOCO1-222ENST00000553154 SLC16A10Q8TF71 515 aa13.33□□□□□ -0.28
CALCOCO1-222ENST00000553154 AK7Q96M32 723 aa13.33□□□□□ -0.28
CALCOCO1-222ENST00000553154 FMNL2Q96PY5 1086 aa13.33□□□□□ -0.28
CALCOCO1-222ENST00000553154 MTFR1LQ9H019 292 aa13.33□□□□□ -0.28
CALCOCO1-222ENST00000553154 BABAM1Q9NWV8 329 aa13.33□□□□□ -0.28
CALCOCO1-222ENST00000553154 SOS1Q07889 1333 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-222ENST00000553154 PRAMEF22A3QJZ6 481 aa13.32□□□□□ -0.28
CALCOCO1-222ENST00000553154 CHL1O00533 1208 aa13.32□□□□□ -0.28
CALCOCO1-222ENST00000553154 GNPATO15228 680 aa13.32□□□□□ -0.28
CALCOCO1-222ENST00000553154 ZNF853P0CG23 659 aa13.32□□□□□ -0.28
CALCOCO1-222ENST00000553154 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-222ENST00000553154 CCDC27Q2M243 656 aa13.32□□□□□ -0.28
CALCOCO1-222ENST00000553154 TTC5Q8N0Z6 440 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms