RNA–Protein interactions for RNA: ENST00000552917.1

RFX4-212, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-212ENST00000552917 ITPK1Q13572 414 aa16.42■□□□□ 0.22
RFX4-212ENST00000552917 LINC00116Q8NCU8 138 aa16.42■□□□□ 0.22
RFX4-212ENST00000552917 ARXQ96QS3 562 aa16.42■□□□□ 0.22
RFX4-212ENST00000552917 RBM42Q9BTD8 480 aaKnown RBP16.42■□□□□ 0.22
RFX4-212ENST00000552917 LGR6Q9HBX8 967 aa16.41■□□□□ 0.22
RFX4-212ENST00000552917 QSER1Q2KHR3 1735 aa16.4■□□□□ 0.22
RFX4-212ENST00000552917 RNMTO43148 476 aaKnown RBP16.4■□□□□ 0.22
RFX4-212ENST00000552917 SLC4A9Q96Q91 983 aa16.4■□□□□ 0.22
RFX4-212ENST00000552917 SLC52A2Q9HAB3 445 aa16.4■□□□□ 0.22
RFX4-212ENST00000552917 C5P01031 1676 aa16.4■□□□□ 0.22
RFX4-212ENST00000552917 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
RFX4-212ENST00000552917 SSFA2P28290 1259 aa16.39■□□□□ 0.21
RFX4-212ENST00000552917 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.21
RFX4-212ENST00000552917 GAS2L2Q8NHY3 880 aa16.39■□□□□ 0.21
RFX4-212ENST00000552917 SYT17Q9BSW7 474 aa16.39■□□□□ 0.21
RFX4-212ENST00000552917 FHDC1Q9C0D6 1143 aaPredicted RBP16.39■□□□□ 0.21
RFX4-212ENST00000552917 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.38■□□□□ 0.21
RFX4-212ENST00000552917 GNPATO15228 680 aa16.38■□□□□ 0.21
RFX4-212ENST00000552917 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
RFX4-212ENST00000552917 PRKAR2BP31323 418 aa16.38■□□□□ 0.21
RFX4-212ENST00000552917 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
RFX4-212ENST00000552917 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
RFX4-212ENST00000552917 RSPH6AQ9H0K4 717 aa16.38■□□□□ 0.21
RFX4-212ENST00000552917 C4BP0C0L5 1744 aa16.38■□□□□ 0.21
RFX4-212ENST00000552917 DCAF8L1A6NGE4 600 aa16.37■□□□□ 0.21
RFX4-212ENST00000552917 PHF14O94880 888 aa16.37■□□□□ 0.21
RFX4-212ENST00000552917 GNAT3A8MTJ3 354 aa16.36■□□□□ 0.21
RFX4-212ENST00000552917 FCHSD2O94868 740 aa16.36■□□□□ 0.21
RFX4-212ENST00000552917 ZEB1P37275 1124 aaPredicted RBP16.36■□□□□ 0.21
RFX4-212ENST00000552917 RC3H1Q5TC82 1133 aaKnown RBP16.36■□□□□ 0.21
RFX4-212ENST00000552917 SMIM5Q71RC9 77 aa16.36■□□□□ 0.21
RFX4-212ENST00000552917 PHACTR3Q96KR7 559 aa16.36■□□□□ 0.21
RFX4-212ENST00000552917 MAP3K5Q99683 1374 aa16.36■□□□□ 0.21
RFX4-212ENST00000552917 TAF1LQ8IZX4 1826 aa16.35■□□□□ 0.21
RFX4-212ENST00000552917 TUBGCP6Q96RT7 1819 aa16.35■□□□□ 0.21
RFX4-212ENST00000552917 RALBP1Q15311 655 aa16.35■□□□□ 0.21
RFX4-212ENST00000552917 MSL1Q68DK7 614 aa16.35■□□□□ 0.21
RFX4-212ENST00000552917 RTCBQ9Y3I0 505 aaKnown RBP16.35■□□□□ 0.21
RFX4-212ENST00000552917 IL17REQ8NFR9 667 aa16.34■□□□□ 0.21
RFX4-212ENST00000552917 CNTNAP4Q9C0A0 1308 aa16.34■□□□□ 0.21
RFX4-212ENST00000552917 MRC1P22897 1456 aa16.34■□□□□ 0.21
RFX4-212ENST00000552917 SLC39A6Q13433 755 aa16.33■□□□□ 0.2
RFX4-212ENST00000552917 SCN11AQ9UI33 1791 aa16.33■□□□□ 0.2
RFX4-212ENST00000552917 RPS6KA4O75676 772 aa16.32■□□□□ 0.2
RFX4-212ENST00000552917 ADRA2BP18089 450 aa16.32■□□□□ 0.2
RFX4-212ENST00000552917 TEFQ10587 303 aa16.32■□□□□ 0.2
RFX4-212ENST00000552917 TRAPPC3LQ5T215 181 aa16.32■□□□□ 0.2
RFX4-212ENST00000552917 KLHL34Q8N239 644 aa16.32■□□□□ 0.2
RFX4-212ENST00000552917 ZNF831Q5JPB2 1677 aa16.31■□□□□ 0.2
RFX4-212ENST00000552917 CRKLP46109 303 aaKnown RBP16.31■□□□□ 0.2
RFX4-212ENST00000552917 ADAMTS7Q9UKP4 1686 aa16.3■□□□□ 0.2
RFX4-212ENST00000552917 COL24A1Q17RW2 1714 aa16.3■□□□□ 0.2
RFX4-212ENST00000552917 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
RFX4-212ENST00000552917 CEMIPQ8WUJ3 1361 aa16.29■□□□□ 0.2
RFX4-212ENST00000552917 NEFMP07197 916 aa16.29■□□□□ 0.2
RFX4-212ENST00000552917 DNAJC10Q8IXB1 793 aa16.29■□□□□ 0.2
RFX4-212ENST00000552917 TTC5Q8N0Z6 440 aa16.29■□□□□ 0.2
RFX4-212ENST00000552917 RTF1Q92541 710 aaKnown RBP16.29■□□□□ 0.2
RFX4-212ENST00000552917 ARHGEF1Q92888 912 aaKnown RBP16.29■□□□□ 0.2
RFX4-212ENST00000552917 RFC4P35249 363 aa16.28■□□□□ 0.2
RFX4-212ENST00000552917 VSIG10Q8N0Z9 540 aa16.28■□□□□ 0.2
RFX4-212ENST00000552917 HTATSF1O43719 755 aaKnown RBP16.27■□□□□ 0.2
RFX4-212ENST00000552917 CYP19A1P11511 503 aaPredicted RBP16.27■□□□□ 0.2
RFX4-212ENST00000552917 INTS5Q6P9B9 1019 aaKnown RBP16.27■□□□□ 0.2
RFX4-212ENST00000552917 ZNF790Q6PG37 636 aa16.27■□□□□ 0.2
RFX4-212ENST00000552917 NLGN1Q8N2Q7 840 aa16.27■□□□□ 0.2
RFX4-212ENST00000552917 PNNQ9H307 717 aaKnown RBP16.27■□□□□ 0.2
RFX4-212ENST00000552917 CCDC87Q9NVE4 849 aa16.27■□□□□ 0.2
RFX4-212ENST00000552917 CD2APQ9Y5K6 639 aa16.27■□□□□ 0.2
RFX4-212ENST00000552917 MYBBP1AQ9BQG0 1328 aaKnown RBP16.26■□□□□ 0.19
RFX4-212ENST00000552917 KCPQ6ZWJ8 1503 aa16.26■□□□□ 0.19
RFX4-212ENST00000552917 COL5A3P25940 1745 aaPredicted RBP16.25■□□□□ 0.19
RFX4-212ENST00000552917 MCM10Q7L590 875 aa16.25■□□□□ 0.19
RFX4-212ENST00000552917 NLGN2Q8NFZ4 835 aa16.25■□□□□ 0.19
RFX4-212ENST00000552917 ZNF496Q96IT1 587 aaPredicted RBP16.25■□□□□ 0.19
RFX4-212ENST00000552917 PLEKHF1Q96S99 279 aa16.25■□□□□ 0.19
RFX4-212ENST00000552917 BTBD11A6QL63 1104 aa16.24■□□□□ 0.19
RFX4-212ENST00000552917 STARD3NLO95772 234 aa16.24■□□□□ 0.19
RFX4-212ENST00000552917 MMP10P09238 476 aa16.24■□□□□ 0.19
RFX4-212ENST00000552917 GYS1P13807 737 aa16.24■□□□□ 0.19
RFX4-212ENST00000552917 CICQ96RK0 1608 aaPredicted RBP16.23■□□□□ 0.19
RFX4-212ENST00000552917 GPR162Q16538 588 aa16.23■□□□□ 0.19
RFX4-212ENST00000552917 FMNL2Q96PY5 1086 aa16.23■□□□□ 0.19
RFX4-212ENST00000552917 TEX13AQ9BXU3 409 aaPredicted RBP16.23■□□□□ 0.19
RFX4-212ENST00000552917 HEG1Q9ULI3 1381 aa16.23■□□□□ 0.19
RFX4-212ENST00000552917 TJP1Q07157 1748 aa16.22■□□□□ 0.19
RFX4-212ENST00000552917 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
RFX4-212ENST00000552917 DCTN1Q14203 1278 aa16.22■□□□□ 0.19
RFX4-212ENST00000552917 ZBTB1Q9Y2K1 713 aa16.22■□□□□ 0.19
RFX4-212ENST00000552917 USP42Q9H9J4 1324 aaKnown RBP16.21■□□□□ 0.19
RFX4-212ENST00000552917 MAPK8IP3Q9UPT6 1336 aa16.21■□□□□ 0.19
RFX4-212ENST00000552917 MYH14Q7Z406 1995 aaKnown RBP16.21■□□□□ 0.19
RFX4-212ENST00000552917 KCNQ3O43525 872 aa16.21■□□□□ 0.19
RFX4-212ENST00000552917 YY1P25490 414 aa16.21■□□□□ 0.19
RFX4-212ENST00000552917 NFE2L2Q16236 605 aa16.21■□□□□ 0.19
RFX4-212ENST00000552917 PRKRIP1Q9H875 184 aaPredicted RBP16.21■□□□□ 0.19
RFX4-212ENST00000552917 SRP68Q9UHB9 627 aaKnown RBP16.21■□□□□ 0.19
RFX4-212ENST00000552917 ZPR1O75312 459 aa16.2■□□□□ 0.18
RFX4-212ENST00000552917 TAF7Q15545 349 aaPredicted RBP16.2■□□□□ 0.18
RFX4-212ENST00000552917 PELP1Q8IZL8 1130 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms