RNA–Protein interactions for RNA: ENST00000552187.1

TMEM106C-218, Transcript of transmembrane protein 106C, humanhuman

TSL 2

Gene TMEM106C, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-218ENST00000552187 NSD3Q9BZ95 1437 aa11.62□□□□□ -0.55
TMEM106C-218ENST00000552187 HMGB2P26583 209 aaKnown RBP11.62□□□□□ -0.55
TMEM106C-218ENST00000552187 WBP1LQ9NX94 342 aa11.62□□□□□ -0.55
TMEM106C-218ENST00000552187 TNRC18O15417 2968 aaPredicted RBP11.62□□□□□ -0.55
TMEM106C-218ENST00000552187 TAF1LQ8IZX4 1826 aa11.62□□□□□ -0.55
TMEM106C-218ENST00000552187 UBR3Q6ZT12 1888 aa11.61□□□□□ -0.55
TMEM106C-218ENST00000552187 SSFA2P28290 1259 aa11.61□□□□□ -0.55
TMEM106C-218ENST00000552187 DCAF5Q96JK2 942 aa11.61□□□□□ -0.55
TMEM106C-218ENST00000552187 GLTPD2A6NH11 291 aa11.6□□□□□ -0.55
TMEM106C-218ENST00000552187 VEGFBP49765 207 aa11.6□□□□□ -0.55
TMEM106C-218ENST00000552187 ZCRB1Q8TBF4 217 aaKnown RBP11.6□□□□□ -0.55
TMEM106C-218ENST00000552187 TTC21AQ8NDW8 1320 aa11.6□□□□□ -0.55
TMEM106C-218ENST00000552187 BRCA1P38398 1863 aaKnown RBP11.59□□□□□ -0.55
TMEM106C-218ENST00000552187 ARFGEF1Q9Y6D6 1849 aa11.59□□□□□ -0.55
TMEM106C-218ENST00000552187 KCNA3P22001 575 aa11.59□□□□□ -0.55
TMEM106C-218ENST00000552187 DALRD3Q5D0E6 543 aaKnown RBP11.59□□□□□ -0.55
TMEM106C-218ENST00000552187 LTV1Q96GA3 475 aaPredicted RBP11.59□□□□□ -0.55
TMEM106C-218ENST00000552187 CCDC87Q9NVE4 849 aa11.59□□□□□ -0.55
TMEM106C-218ENST00000552187 PIM2Q9P1W9 311 aa11.59□□□□□ -0.55
TMEM106C-218ENST00000552187 GNPATO15228 680 aa11.58□□□□□ -0.56
TMEM106C-218ENST00000552187 RASSF7Q02833 373 aa11.58□□□□□ -0.56
TMEM106C-218ENST00000552187 ZC3H4Q9UPT8 1303 aaKnown RBP11.58□□□□□ -0.56
TMEM106C-218ENST00000552187 SBF1O95248 1867 aa11.57□□□□□ -0.56
TMEM106C-218ENST00000552187 CENPJQ9HC77 1338 aaPredicted RBP11.57□□□□□ -0.56
TMEM106C-218ENST00000552187 POTECB2RU33 542 aa11.56□□□□□ -0.56
TMEM106C-218ENST00000552187 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
TMEM106C-218ENST00000552187 MPRIPQ6WCQ1 1025 aa11.56□□□□□ -0.56
TMEM106C-218ENST00000552187 LINC00116Q8NCU8 138 aa11.56□□□□□ -0.56
TMEM106C-218ENST00000552187 MEGF6O75095 1541 aa11.55□□□□□ -0.56
TMEM106C-218ENST00000552187 LTN1O94822 1766 aa11.55□□□□□ -0.56
TMEM106C-218ENST00000552187 TMF1P82094 1093 aa11.54□□□□□ -0.56
TMEM106C-218ENST00000552187 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.54□□□□□ -0.56
TMEM106C-218ENST00000552187 NLGN1Q8N2Q7 840 aa11.54□□□□□ -0.56
TMEM106C-218ENST00000552187 SMARCC1Q92922 1105 aaPredicted RBP11.54□□□□□ -0.56
TMEM106C-218ENST00000552187 KDM6AO15550 1401 aaPredicted RBP11.53□□□□□ -0.56
TMEM106C-218ENST00000552187 POTEIP0CG38 1075 aa11.53□□□□□ -0.56
TMEM106C-218ENST00000552187 POTEJP0CG39 1038 aa11.53□□□□□ -0.56
TMEM106C-218ENST00000552187 LMNB1P20700 586 aa11.53□□□□□ -0.56
TMEM106C-218ENST00000552187 NME9Q86XW9 330 aa11.53□□□□□ -0.56
TMEM106C-218ENST00000552187 STAC3Q96MF2 364 aa11.53□□□□□ -0.56
TMEM106C-218ENST00000552187 PARP3Q9Y6F1 533 aa11.53□□□□□ -0.56
TMEM106C-218ENST00000552187 KTN1Q86UP2 1357 aaKnown RBP11.53□□□□□ -0.56
TMEM106C-218ENST00000552187 C4AP0C0L4 1744 aa11.52□□□□□ -0.56
TMEM106C-218ENST00000552187 CHRNA5P30532 468 aa11.52□□□□□ -0.57
TMEM106C-218ENST00000552187 MAP2K1Q02750 393 aaPredicted RBP11.52□□□□□ -0.57
TMEM106C-218ENST00000552187 USP31Q70CQ4 1352 aa11.52□□□□□ -0.57
TMEM106C-218ENST00000552187 VIRMAQ69YN4 1812 aaKnown RBP11.51□□□□□ -0.57
TMEM106C-218ENST00000552187 LOC102724428A0A0B4J2F2 783 aa11.51□□□□□ -0.57
TMEM106C-218ENST00000552187 TMEM88BA6NKF7 163 aa11.51□□□□□ -0.57
TMEM106C-218ENST00000552187 SIK1P57059 783 aa11.51□□□□□ -0.57
TMEM106C-218ENST00000552187 PRPF38BQ5VTL8 546 aaKnown RBP11.51□□□□□ -0.57
TMEM106C-218ENST00000552187 IP6K1Q92551 441 aa11.51□□□□□ -0.57
TMEM106C-218ENST00000552187 PASKQ96RG2 1323 aa11.51□□□□□ -0.57
TMEM106C-218ENST00000552187 FAM208AQ9UK61 1670 aaKnown RBP11.5□□□□□ -0.57
TMEM106C-218ENST00000552187 ITPK1Q13572 414 aa11.5□□□□□ -0.57
TMEM106C-218ENST00000552187 NBPF1Q3BBV0 1214 aa11.5□□□□□ -0.57
TMEM106C-218ENST00000552187 MCOLN1Q9GZU1 580 aa11.5□□□□□ -0.57
TMEM106C-218ENST00000552187 GYS1P13807 737 aa11.49□□□□□ -0.57
TMEM106C-218ENST00000552187 TRAPPC3LQ5T215 181 aa11.49□□□□□ -0.57
TMEM106C-218ENST00000552187 DPY19L2Q6NUT2 758 aa11.49□□□□□ -0.57
TMEM106C-218ENST00000552187 PIGBQ92521 554 aa11.49□□□□□ -0.57
TMEM106C-218ENST00000552187 EVC2Q86UK5 1308 aa11.49□□□□□ -0.57
TMEM106C-218ENST00000552187 TIAM2Q8IVF5 1701 aa11.49□□□□□ -0.57
TMEM106C-218ENST00000552187 PCDH11XQ9BZA7 1347 aa11.47□□□□□ -0.57
TMEM106C-218ENST00000552187 PCDH11YQ9BZA8 1340 aa11.47□□□□□ -0.57
TMEM106C-218ENST00000552187 WDR33Q9C0J8 1336 aaKnown RBP11.47□□□□□ -0.57
TMEM106C-218ENST00000552187 ATP6V1AP38606 617 aa11.47□□□□□ -0.57
TMEM106C-218ENST00000552187 DEFB115Q30KQ5 88 aa11.47□□□□□ -0.57
TMEM106C-218ENST00000552187 USHBP1Q8N6Y0 703 aa11.47□□□□□ -0.57
TMEM106C-218ENST00000552187 RAPGEF4Q8WZA2 1011 aa11.47□□□□□ -0.57
TMEM106C-218ENST00000552187 BEGAINQ9BUH8 593 aa11.47□□□□□ -0.57
TMEM106C-218ENST00000552187 TSKSQ9UJT2 592 aa11.47□□□□□ -0.57
TMEM106C-218ENST00000552187 RTCBQ9Y3I0 505 aaKnown RBP11.47□□□□□ -0.57
TMEM106C-218ENST00000552187 MAP2P11137 1827 aaKnown RBP11.46□□□□□ -0.57
TMEM106C-218ENST00000552187 RASSF10A6NK89 507 aa11.46□□□□□ -0.57
TMEM106C-218ENST00000552187 ARHGEF1Q92888 912 aaKnown RBP11.46□□□□□ -0.57
TMEM106C-218ENST00000552187 CGNL1Q0VF96 1302 aa11.45□□□□□ -0.58
TMEM106C-218ENST00000552187 RFC4P35249 363 aa11.45□□□□□ -0.58
TMEM106C-218ENST00000552187 LDHDQ86WU2 507 aa11.45□□□□□ -0.58
TMEM106C-218ENST00000552187 RGPD2P0DJD1 1756 aa11.45□□□□□ -0.58
TMEM106C-218ENST00000552187 NFKBIEO00221 500 aa11.44□□□□□ -0.58
TMEM106C-218ENST00000552187 CYP27B1O15528 508 aa11.44□□□□□ -0.58
TMEM106C-218ENST00000552187 TATP17735 454 aaPredicted RBP11.44□□□□□ -0.58
TMEM106C-218ENST00000552187 HOXC9P31274 260 aa11.44□□□□□ -0.58
TMEM106C-218ENST00000552187 SOX10P56693 466 aa11.44□□□□□ -0.58
TMEM106C-218ENST00000552187 DDR1Q08345 913 aa11.44□□□□□ -0.58
TMEM106C-218ENST00000552187 NBPF6Q5VWK0 638 aa11.44□□□□□ -0.58
TMEM106C-218ENST00000552187 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
TMEM106C-218ENST00000552187 NBPF4Q96M43 638 aa11.44□□□□□ -0.58
TMEM106C-218ENST00000552187 ABT1Q9ULW3 272 aaKnown RBP11.44□□□□□ -0.58
TMEM106C-218ENST00000552187 ITGB4P16144 1822 aa11.44□□□□□ -0.58
TMEM106C-218ENST00000552187 MON2Q7Z3U7 1717 aa11.43□□□□□ -0.58
TMEM106C-218ENST00000552187 SBNO2Q9Y2G9 1366 aa11.43□□□□□ -0.58
TMEM106C-218ENST00000552187 DDNO94850 711 aaPredicted RBP11.43□□□□□ -0.58
TMEM106C-218ENST00000552187 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
TMEM106C-218ENST00000552187 DGKZQ13574 1117 aa11.43□□□□□ -0.58
TMEM106C-218ENST00000552187 ERFEQ4G0M1 354 aa11.43□□□□□ -0.58
TMEM106C-218ENST00000552187 ASAP1Q9ULH1 1129 aa11.43□□□□□ -0.58
TMEM106C-218ENST00000552187 CD163L1Q9NR16 1453 aa11.43□□□□□ -0.58
TMEM106C-218ENST00000552187 CCDC88AQ3V6T2 1871 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms