RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 FCHSD2O94868 740 aa21.37■■□□□ 1.01
BRF1-220ENST00000552127 SMARCC1Q92922 1105 aaPredicted RBP21.37■■□□□ 1.01
BRF1-220ENST00000552127 C10orf71Q711Q0 1435 aa21.37■■□□□ 1.01
BRF1-220ENST00000552127 RTL1A6NKG5 1358 aa21.36■■□□□ 1.01
BRF1-220ENST00000552127 HSPA5P11021 654 aaKnown RBP21.36■■□□□ 1.01
BRF1-220ENST00000552127 AMPHP49418 695 aa21.36■■□□□ 1.01
BRF1-220ENST00000552127 NBPF6Q5VWK0 638 aa21.36■■□□□ 1.01
BRF1-220ENST00000552127 USHBP1Q8N6Y0 703 aa21.36■■□□□ 1.01
BRF1-220ENST00000552127 NBPF4Q96M43 638 aa21.36■■□□□ 1.01
BRF1-220ENST00000552127 GGNBP2Q9H3C7 697 aa21.36■■□□□ 1.01
BRF1-220ENST00000552127 TNRC6CQ9HCJ0 1690 aaKnown RBP21.36■■□□□ 1.01
BRF1-220ENST00000552127 MAP2P11137 1827 aaKnown RBP21.35■■□□□ 1.01
BRF1-220ENST00000552127 FBLN1P23142 703 aa21.35■■□□□ 1.01
BRF1-220ENST00000552127 LINC00116Q8NCU8 138 aa21.35■■□□□ 1.01
BRF1-220ENST00000552127 SMC1BQ8NDV3 1235 aa21.35■■□□□ 1.01
BRF1-220ENST00000552127 RAPGEF4Q8WZA2 1011 aa21.35■■□□□ 1.01
BRF1-220ENST00000552127 ARFGEF1Q9Y6D6 1849 aa21.34■■□□□ 1.01
BRF1-220ENST00000552127 PCDH11XQ9BZA7 1347 aa21.34■■□□□ 1.01
BRF1-220ENST00000552127 PCDH11YQ9BZA8 1340 aa21.34■■□□□ 1.01
BRF1-220ENST00000552127 DPEP1P16444 411 aa21.34■■□□□ 1.01
BRF1-220ENST00000552127 CARD14Q9BXL6 1004 aa21.33■■□□□ 1.01
BRF1-220ENST00000552127 GNPATO15228 680 aa21.32■■□□□ 1
BRF1-220ENST00000552127 TATP17735 454 aaPredicted RBP21.32■■□□□ 1
BRF1-220ENST00000552127 POLR3GLQ9BT43 218 aa21.31■■□□□ 1
BRF1-220ENST00000552127 LOC102724428A0A0B4J2F2 783 aa21.3■■□□□ 1
BRF1-220ENST00000552127 CYP27B1O15528 508 aa21.3■■□□□ 1
BRF1-220ENST00000552127 SIK1P57059 783 aa21.3■■□□□ 1
BRF1-220ENST00000552127 PIGBQ92521 554 aa21.3■■□□□ 1
BRF1-220ENST00000552127 RNF181Q9P0P0 153 aa21.3■■□□□ 1
BRF1-220ENST00000552127 RRS1Q15050 365 aaKnown RBP21.29■■□□□ 1
BRF1-220ENST00000552127 SBF1O95248 1867 aa21.28■■□□□ 1
BRF1-220ENST00000552127 KCNA3P22001 575 aa21.28■■□□□ 1
BRF1-220ENST00000552127 ITPK1Q13572 414 aa21.28■■□□□ 1
BRF1-220ENST00000552127 CCDC87Q9NVE4 849 aa21.28■■□□□ 1
BRF1-220ENST00000552127 SMG6Q86US8 1419 aaKnown RBP21.28■■□□□ 1
BRF1-220ENST00000552127 C4AP0C0L4 1744 aa21.27■■□□□ 1
BRF1-220ENST00000552127 KIF24Q5T7B8 1368 aa21.27■■□□□ 1
BRF1-220ENST00000552127 FLT4P35916 1363 aa21.26■□□□□ 0.99
BRF1-220ENST00000552127 NLGN1Q8N2Q7 840 aa21.26■□□□□ 0.99
BRF1-220ENST00000552127 DCAF5Q96JK2 942 aa21.25■□□□□ 0.99
BRF1-220ENST00000552127 ATP6V1AP38606 617 aa21.24■□□□□ 0.99
BRF1-220ENST00000552127 PIM2Q9P1W9 311 aa21.24■□□□□ 0.99
BRF1-220ENST00000552127 INSRP06213 1382 aa21.23■□□□□ 0.99
BRF1-220ENST00000552127 TRAPPC3LQ5T215 181 aa21.23■□□□□ 0.99
BRF1-220ENST00000552127 ASAP1Q9ULH1 1129 aa21.22■□□□□ 0.99
BRF1-220ENST00000552127 DALRD3Q5D0E6 543 aaKnown RBP21.21■□□□□ 0.99
BRF1-220ENST00000552127 PARP3Q9Y6F1 533 aa21.21■□□□□ 0.99
BRF1-220ENST00000552127 PCDH10Q9P2E7 1040 aa21.2■□□□□ 0.98
BRF1-220ENST00000552127 RTCBQ9Y3I0 505 aaKnown RBP21.2■□□□□ 0.98
BRF1-220ENST00000552127 GYS1P13807 737 aa21.19■□□□□ 0.98
BRF1-220ENST00000552127 NKX1-1Q15270 411 aaPredicted RBP21.19■□□□□ 0.98
BRF1-220ENST00000552127 HSP90AB2PQ58FF8 381 aa21.19■□□□□ 0.98
BRF1-220ENST00000552127 EMILIN1Q9Y6C2 1016 aa21.19■□□□□ 0.98
BRF1-220ENST00000552127 VEGFAP15692 232 aaPredicted RBP21.18■□□□□ 0.98
BRF1-220ENST00000552127 ARHGEF1Q92888 912 aaKnown RBP21.18■□□□□ 0.98
BRF1-220ENST00000552127 PANK3Q9H999 370 aa21.18■□□□□ 0.98
BRF1-220ENST00000552127 TMOD3Q9NYL9 352 aa21.18■□□□□ 0.98
BRF1-220ENST00000552127 FOXN1O15353 648 aa21.16■□□□□ 0.98
BRF1-220ENST00000552127 NCAPD2Q15021 1401 aa21.15■□□□□ 0.98
BRF1-220ENST00000552127 ZC3H4Q9UPT8 1303 aaKnown RBP21.15■□□□□ 0.98
BRF1-220ENST00000552127 GLTPD2A6NH11 291 aa21.15■□□□□ 0.98
BRF1-220ENST00000552127 KIF7Q2M1P5 1343 aa21.14■□□□□ 0.97
BRF1-220ENST00000552127 ADRA2BP18089 450 aa21.14■□□□□ 0.97
BRF1-220ENST00000552127 RFC4P35249 363 aa21.14■□□□□ 0.97
BRF1-220ENST00000552127 RASSF7Q02833 373 aa21.14■□□□□ 0.97
BRF1-220ENST00000552127 PRDM10Q9NQV6 1147 aa21.14■□□□□ 0.97
BRF1-220ENST00000552127 ATG3Q9NT62 314 aa21.14■□□□□ 0.97
BRF1-220ENST00000552127 MKRN1Q9UHC7 482 aaKnown RBP21.14■□□□□ 0.97
BRF1-220ENST00000552127 CHRNA5P30532 468 aa21.13■□□□□ 0.97
BRF1-220ENST00000552127 FAM161AQ3B820 660 aa21.13■□□□□ 0.97
BRF1-220ENST00000552127 KDM6AO15550 1401 aaPredicted RBP21.12■□□□□ 0.97
BRF1-220ENST00000552127 WASHC2AQ641Q2 1341 aa21.12■□□□□ 0.97
BRF1-220ENST00000552127 PPM1GO15355 546 aaPredicted RBP21.12■□□□□ 0.97
BRF1-220ENST00000552127 COL5A3P25940 1745 aaPredicted RBP21.12■□□□□ 0.97
BRF1-220ENST00000552127 KDRP35968 1356 aa21.11■□□□□ 0.97
BRF1-220ENST00000552127 SLC4A9Q96Q91 983 aa21.11■□□□□ 0.97
BRF1-220ENST00000552127 POLKQ9UBT6 870 aa21.11■□□□□ 0.97
BRF1-220ENST00000552127 SPG7Q9UQ90 795 aa21.11■□□□□ 0.97
BRF1-220ENST00000552127 RC3H1Q5TC82 1133 aaKnown RBP21.1■□□□□ 0.97
BRF1-220ENST00000552127 CREBZFQ9NS37 354 aa21.1■□□□□ 0.97
BRF1-220ENST00000552127 TIAM2Q8IVF5 1701 aa21.09■□□□□ 0.97
BRF1-220ENST00000552127 ZNF831Q5JPB2 1677 aa21.09■□□□□ 0.97
BRF1-220ENST00000552127 TNNT2P45379 298 aaPredicted RBP21.09■□□□□ 0.97
BRF1-220ENST00000552127 CCDC88AQ3V6T2 1871 aa21.09■□□□□ 0.97
BRF1-220ENST00000552127 CNTNAP4Q9C0A0 1308 aa21.08■□□□□ 0.97
BRF1-220ENST00000552127 POTECB2RU33 542 aa21.08■□□□□ 0.97
BRF1-220ENST00000552127 RPS6KA4O75676 772 aa21.08■□□□□ 0.97
BRF1-220ENST00000552127 LMNB1P20700 586 aa21.08■□□□□ 0.97
BRF1-220ENST00000552127 DDR1Q08345 913 aa21.08■□□□□ 0.97
BRF1-220ENST00000552127 MYH14Q7Z406 1995 aaKnown RBP21.08■□□□□ 0.96
BRF1-220ENST00000552127 RBM42Q9BTD8 480 aaKnown RBP21.07■□□□□ 0.96
BRF1-220ENST00000552127 CTCFP49711 727 aaPredicted RBP21.06■□□□□ 0.96
BRF1-220ENST00000552127 KNSTRNQ9Y448 316 aa21.06■□□□□ 0.96
BRF1-220ENST00000552127 FKBP8Q14318 412 aa21.05■□□□□ 0.96
BRF1-220ENST00000552127 SRP68Q9UHB9 627 aaKnown RBP21.05■□□□□ 0.96
BRF1-220ENST00000552127 PHKG2P15735 406 aa21.04■□□□□ 0.96
BRF1-220ENST00000552127 MORC1Q86VD1 984 aa21.04■□□□□ 0.96
BRF1-220ENST00000552127 IFNL2Q8IZJ0 200 aa21.04■□□□□ 0.96
BRF1-220ENST00000552127 AIDAQ96BJ3 306 aa21.04■□□□□ 0.96
BRF1-220ENST00000552127 CNTNAP1P78357 1384 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms