RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 MRS2Q9HD23 443 aa21.71■■□□□ 1.07
GCN1-209ENST00000551920 CCNL1Q9UK58 526 aaPredicted RBP21.71■■□□□ 1.07
GCN1-209ENST00000551920 MAPK8IP3Q9UPT6 1336 aa21.71■■□□□ 1.07
GCN1-209ENST00000551920 PSDA5PKW4 1024 aaPredicted RBP21.7■■□□□ 1.06
GCN1-209ENST00000551920 MCM10Q7L590 875 aa21.7■■□□□ 1.06
GCN1-209ENST00000551920 SMARCC1Q92922 1105 aaPredicted RBP21.7■■□□□ 1.06
GCN1-209ENST00000551920 DLG5Q8TDM6 1919 aa21.69■■□□□ 1.06
GCN1-209ENST00000551920 DCTN1Q14203 1278 aa21.69■■□□□ 1.06
GCN1-209ENST00000551920 R3HDM1Q15032 1099 aaKnown RBP21.69■■□□□ 1.06
GCN1-209ENST00000551920 ZNF827Q17R98 1081 aa21.69■■□□□ 1.06
GCN1-209ENST00000551920 C5P01031 1676 aa21.69■■□□□ 1.06
GCN1-209ENST00000551920 LOC102724428A0A0B4J2F2 783 aa21.68■■□□□ 1.06
GCN1-209ENST00000551920 SIK1P57059 783 aa21.68■■□□□ 1.06
GCN1-209ENST00000551920 PNISRQ8TF01 805 aaKnown RBP21.68■■□□□ 1.06
GCN1-209ENST00000551920 SLC4A9Q96Q91 983 aa21.68■■□□□ 1.06
GCN1-209ENST00000551920 PNNQ9H307 717 aaKnown RBP21.68■■□□□ 1.06
GCN1-209ENST00000551920 KCPQ6ZWJ8 1503 aa21.68■■□□□ 1.06
GCN1-209ENST00000551920 SRCAPQ6ZRS2 3230 aa21.67■■□□□ 1.06
GCN1-209ENST00000551920 NEFMP07197 916 aa21.67■■□□□ 1.06
GCN1-209ENST00000551920 ITPK1Q13572 414 aa21.66■■□□□ 1.06
GCN1-209ENST00000551920 RUNDC1Q96C34 613 aa21.66■■□□□ 1.06
GCN1-209ENST00000551920 TAF1LQ8IZX4 1826 aa21.65■■□□□ 1.06
GCN1-209ENST00000551920 HTATSF1O43719 755 aaKnown RBP21.65■■□□□ 1.06
GCN1-209ENST00000551920 TMPOP42166 694 aaKnown RBP21.65■■□□□ 1.06
GCN1-209ENST00000551920 SLC39A6Q13433 755 aa21.65■■□□□ 1.06
GCN1-209ENST00000551920 NBPF14Q5TI25 921 aa21.65■■□□□ 1.06
GCN1-209ENST00000551920 AKT1S1Q96B36 256 aa21.65■■□□□ 1.06
GCN1-209ENST00000551920 THUMPD2Q9BTF0 503 aaKnown RBP21.65■■□□□ 1.06
GCN1-209ENST00000551920 RRP7AQ9Y3A4 280 aaKnown RBP21.65■■□□□ 1.06
GCN1-209ENST00000551920 UBR2Q8IWV8 1755 aa21.65■■□□□ 1.06
GCN1-209ENST00000551920 ZNF831Q5JPB2 1677 aa21.65■■□□□ 1.06
GCN1-209ENST00000551920 TEFQ10587 303 aa21.64■■□□□ 1.05
GCN1-209ENST00000551920 RTF1Q92541 710 aaKnown RBP21.64■■□□□ 1.05
GCN1-209ENST00000551920 CICQ96RK0 1608 aaPredicted RBP21.64■■□□□ 1.05
GCN1-209ENST00000551920 C4BP0C0L5 1744 aa21.63■■□□□ 1.05
GCN1-209ENST00000551920 TJP1Q07157 1748 aa21.63■■□□□ 1.05
GCN1-209ENST00000551920 PTCD1O75127 700 aaKnown RBP21.63■■□□□ 1.05
GCN1-209ENST00000551920 SLC15A2Q16348 729 aa21.63■■□□□ 1.05
GCN1-209ENST00000551920 LINC00116Q8NCU8 138 aa21.63■■□□□ 1.05
GCN1-209ENST00000551920 TUBGCP6Q96RT7 1819 aa21.63■■□□□ 1.05
GCN1-209ENST00000551920 CASZ1Q86V15 1759 aa21.63■■□□□ 1.05
GCN1-209ENST00000551920 PDGFDQ9GZP0 370 aaPredicted RBP21.62■■□□□ 1.05
GCN1-209ENST00000551920 STK32BQ9NY57 414 aa21.62■■□□□ 1.05
GCN1-209ENST00000551920 COL5A3P25940 1745 aaPredicted RBP21.61■■□□□ 1.05
GCN1-209ENST00000551920 RIPK4P57078 832 aa21.61■■□□□ 1.05
GCN1-209ENST00000551920 RBM42Q9BTD8 480 aaKnown RBP21.61■■□□□ 1.05
GCN1-209ENST00000551920 ATP6V1AP38606 617 aa21.6■■□□□ 1.05
GCN1-209ENST00000551920 AMIGO3Q86WK7 504 aa21.6■■□□□ 1.05
GCN1-209ENST00000551920 KCNQ3O43525 872 aa21.59■■□□□ 1.05
GCN1-209ENST00000551920 DIEXFQ68CQ4 756 aaKnown RBP21.59■■□□□ 1.05
GCN1-209ENST00000551920 TRIM35Q9UPQ4 493 aa21.59■■□□□ 1.05
GCN1-209ENST00000551920 APAF1O14727 1248 aa21.58■■□□□ 1.05
GCN1-209ENST00000551920 NEUROD2Q15784 382 aa21.58■■□□□ 1.05
GCN1-209ENST00000551920 ZNF790Q6PG37 636 aa21.58■■□□□ 1.05
GCN1-209ENST00000551920 QSER1Q2KHR3 1735 aa21.58■■□□□ 1.04
GCN1-209ENST00000551920 ZNF496Q96IT1 587 aaPredicted RBP21.57■■□□□ 1.04
GCN1-209ENST00000551920 PNPLA7Q6ZV29 1317 aa21.56■■□□□ 1.04
GCN1-209ENST00000551920 BTBD11A6QL63 1104 aa21.56■■□□□ 1.04
GCN1-209ENST00000551920 KDM3BQ7LBC6 1761 aa21.56■■□□□ 1.04
GCN1-209ENST00000551920 SENP3-EIF4A1A0A087X0R7 540 aa21.55■■□□□ 1.04
GCN1-209ENST00000551920 SMIM5Q71RC9 77 aa21.55■■□□□ 1.04
GCN1-209ENST00000551920 MIS18AQ9NYP9 233 aa21.55■■□□□ 1.04
GCN1-209ENST00000551920 UBR3Q6ZT12 1888 aa21.54■■□□□ 1.04
GCN1-209ENST00000551920 LMOD3Q0VAK6 560 aa21.54■■□□□ 1.04
GCN1-209ENST00000551920 TAF7Q15545 349 aaPredicted RBP21.54■■□□□ 1.04
GCN1-209ENST00000551920 DNAJC10Q8IXB1 793 aa21.54■■□□□ 1.04
GCN1-209ENST00000551920 TTC5Q8N0Z6 440 aa21.54■■□□□ 1.04
GCN1-209ENST00000551920 TFCP2L1Q9NZI6 479 aa21.54■■□□□ 1.04
GCN1-209ENST00000551920 HEG1Q9ULI3 1381 aa21.53■■□□□ 1.04
GCN1-209ENST00000551920 CNTNAP4Q9C0A0 1308 aa21.53■■□□□ 1.04
GCN1-209ENST00000551920 FAM9BQ8IZU0 186 aa21.52■■□□□ 1.04
GCN1-209ENST00000551920 AK7Q96M32 723 aa21.52■■□□□ 1.04
GCN1-209ENST00000551920 VSIG10Q8N0Z9 540 aa21.51■■□□□ 1.03
GCN1-209ENST00000551920 MIER1Q8N108 512 aa21.51■■□□□ 1.03
GCN1-209ENST00000551920 LRP5O75197 1615 aa21.51■■□□□ 1.03
GCN1-209ENST00000551920 MYH14Q7Z406 1995 aaKnown RBP21.5■■□□□ 1.03
GCN1-209ENST00000551920 CCER2I3L3R5 266 aa21.5■■□□□ 1.03
GCN1-209ENST00000551920 GNPATO15228 680 aa21.5■■□□□ 1.03
GCN1-209ENST00000551920 CRKLP46109 303 aaKnown RBP21.5■■□□□ 1.03
GCN1-209ENST00000551920 PRAMEF22A3QJZ6 481 aa21.49■■□□□ 1.03
GCN1-209ENST00000551920 CYP19A1P11511 503 aaPredicted RBP21.49■■□□□ 1.03
GCN1-209ENST00000551920 COL23A1Q86Y22 540 aaPredicted RBP21.49■■□□□ 1.03
GCN1-209ENST00000551920 FMNL2Q96PY5 1086 aa21.49■■□□□ 1.03
GCN1-209ENST00000551920 ZBTB7AO95365 584 aa21.48■■□□□ 1.03
GCN1-209ENST00000551920 RC3H1Q5TC82 1133 aaKnown RBP21.48■■□□□ 1.03
GCN1-209ENST00000551920 INTS5Q6P9B9 1019 aaKnown RBP21.48■■□□□ 1.03
GCN1-209ENST00000551920 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.47■■□□□ 1.03
GCN1-209ENST00000551920 PHF14O94880 888 aa21.47■■□□□ 1.03
GCN1-209ENST00000551920 HMGB2P26583 209 aaKnown RBP21.46■■□□□ 1.03
GCN1-209ENST00000551920 SSFA2P28290 1259 aa21.46■■□□□ 1.03
GCN1-209ENST00000551920 EIF4A1P60842 406 aaKnown RBP21.45■■□□□ 1.02
GCN1-209ENST00000551920 CCDC87Q9NVE4 849 aa21.45■■□□□ 1.02
GCN1-209ENST00000551920 TSPYL4Q9UJ04 414 aa21.45■■□□□ 1.02
GCN1-209ENST00000551920 ZBTB1Q9Y2K1 713 aa21.45■■□□□ 1.02
GCN1-209ENST00000551920 C4AP0C0L4 1744 aa21.44■■□□□ 1.02
GCN1-209ENST00000551920 LAMB4A4D0S4 1761 aa21.43■■□□□ 1.02
GCN1-209ENST00000551920 CHL1O00533 1208 aa21.43■■□□□ 1.02
GCN1-209ENST00000551920 RPS6KA4O75676 772 aa21.43■■□□□ 1.02
GCN1-209ENST00000551920 RTCBQ9Y3I0 505 aaKnown RBP21.43■■□□□ 1.02
GCN1-209ENST00000551920 SOS1Q07889 1333 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms