RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 NCBP3Q53F19 620 aaKnown RBP15.33■□□□□ 0.04
PRPF40B-213ENST00000551269 ZNF831Q5JPB2 1677 aa15.32■□□□□ 0.04
PRPF40B-213ENST00000551269 SLC52A2Q9HAB3 445 aa15.32■□□□□ 0.04
PRPF40B-213ENST00000551269 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
PRPF40B-213ENST00000551269 CICQ96RK0 1608 aaPredicted RBP15.32■□□□□ 0.04
PRPF40B-213ENST00000551269 YTHDC1Q96MU7 727 aaKnown RBP15.31■□□□□ 0.04
PRPF40B-213ENST00000551269 THUMPD2Q9BTF0 503 aaKnown RBP15.31■□□□□ 0.04
PRPF40B-213ENST00000551269 LGR6Q9HBX8 967 aa15.31■□□□□ 0.04
PRPF40B-213ENST00000551269 RREB1Q92766 1687 aa15.31■□□□□ 0.04
PRPF40B-213ENST00000551269 COL5A3P25940 1745 aaPredicted RBP15.31■□□□□ 0.04
PRPF40B-213ENST00000551269 TJP1Q07157 1748 aa15.31■□□□□ 0.04
PRPF40B-213ENST00000551269 PRIM1P49642 420 aaKnown RBP15.3■□□□□ 0.04
PRPF40B-213ENST00000551269 WWC1Q8IX03 1113 aa15.3■□□□□ 0.04
PRPF40B-213ENST00000551269 IL17REQ8NFR9 667 aa15.3■□□□□ 0.04
PRPF40B-213ENST00000551269 ZBED9Q6R2W3 1325 aa15.29■□□□□ 0.04
PRPF40B-213ENST00000551269 TRIM37O94972 964 aa15.29■□□□□ 0.04
PRPF40B-213ENST00000551269 KCPQ6ZWJ8 1503 aa15.28■□□□□ 0.04
PRPF40B-213ENST00000551269 SF3B2Q13435 895 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-213ENST00000551269 TTC5Q8N0Z6 440 aa15.28■□□□□ 0.04
PRPF40B-213ENST00000551269 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
PRPF40B-213ENST00000551269 NUP188Q5SRE5 1749 aa15.28■□□□□ 0.04
PRPF40B-213ENST00000551269 CACNA1FO60840 1977 aa15.27■□□□□ 0.04
PRPF40B-213ENST00000551269 BTBD11A6QL63 1104 aa15.27■□□□□ 0.04
PRPF40B-213ENST00000551269 NFATC2IPQ8NCF5 419 aa15.27■□□□□ 0.04
PRPF40B-213ENST00000551269 BCL11BQ9C0K0 894 aaPredicted RBP15.27■□□□□ 0.04
PRPF40B-213ENST00000551269 PALLDQ8WX93 1383 aa15.26■□□□□ 0.03
PRPF40B-213ENST00000551269 IL16Q14005 1332 aa15.26■□□□□ 0.03
PRPF40B-213ENST00000551269 KCNQ2O43526 872 aa15.26■□□□□ 0.03
PRPF40B-213ENST00000551269 GNAI1P63096 354 aa15.26■□□□□ 0.03
PRPF40B-213ENST00000551269 TAF7Q15545 349 aaPredicted RBP15.26■□□□□ 0.03
PRPF40B-213ENST00000551269 WDR63Q8IWG1 891 aa15.26■□□□□ 0.03
PRPF40B-213ENST00000551269 PIGBQ92521 554 aa15.26■□□□□ 0.03
PRPF40B-213ENST00000551269 IFT57Q9NWB7 429 aa15.26■□□□□ 0.03
PRPF40B-213ENST00000551269 TSPYL4Q9UJ04 414 aa15.26■□□□□ 0.03
PRPF40B-213ENST00000551269 ZNF521Q96K83 1311 aa15.25■□□□□ 0.03
PRPF40B-213ENST00000551269 GOLGA2Q08379 1002 aa15.25■□□□□ 0.03
PRPF40B-213ENST00000551269 SMARCC1Q92922 1105 aaPredicted RBP15.25■□□□□ 0.03
PRPF40B-213ENST00000551269 MYH16Q9H6N6 1097 aa15.24■□□□□ 0.03
PRPF40B-213ENST00000551269 BABAM1Q9NWV8 329 aa15.24■□□□□ 0.03
PRPF40B-213ENST00000551269 TUBGCP6Q96RT7 1819 aa15.24■□□□□ 0.03
PRPF40B-213ENST00000551269 CFAP44Q96MT7 982 aa15.23■□□□□ 0.03
PRPF40B-213ENST00000551269 C4BP0C0L5 1744 aa15.23■□□□□ 0.03
PRPF40B-213ENST00000551269 E9PSI1 815 aa15.22■□□□□ 0.03
PRPF40B-213ENST00000551269 APBA3O96018 575 aa15.22■□□□□ 0.03
PRPF40B-213ENST00000551269 BAG6P46379 1132 aa15.22■□□□□ 0.03
PRPF40B-213ENST00000551269 SLC39A6Q13433 755 aa15.22■□□□□ 0.03
PRPF40B-213ENST00000551269 ZNF790Q6PG37 636 aa15.22■□□□□ 0.03
PRPF40B-213ENST00000551269 ILDR2Q71H61 639 aa15.22■□□□□ 0.03
PRPF40B-213ENST00000551269 PTF1AQ7RTS3 328 aa15.21■□□□□ 0.03
PRPF40B-213ENST00000551269 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
PRPF40B-213ENST00000551269 ATG3Q9NT62 314 aa15.21■□□□□ 0.03
PRPF40B-213ENST00000551269 ASAP1Q9ULH1 1129 aa15.21■□□□□ 0.03
PRPF40B-213ENST00000551269 QSER1Q2KHR3 1735 aa15.2■□□□□ 0.02
PRPF40B-213ENST00000551269 FANCIQ9NVI1 1328 aa15.2■□□□□ 0.02
PRPF40B-213ENST00000551269 CCDC125Q86Z20 511 aa15.2■□□□□ 0.02
PRPF40B-213ENST00000551269 FMNL2Q96PY5 1086 aa15.2■□□□□ 0.02
PRPF40B-213ENST00000551269 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
PRPF40B-213ENST00000551269 MIS18AQ9NYP9 233 aa15.2■□□□□ 0.02
PRPF40B-213ENST00000551269 UBR3Q6ZT12 1888 aa15.2■□□□□ 0.02
PRPF40B-213ENST00000551269 MYH14Q7Z406 1995 aaKnown RBP15.19■□□□□ 0.02
PRPF40B-213ENST00000551269 CHL1O00533 1208 aa15.19■□□□□ 0.02
PRPF40B-213ENST00000551269 PTCD1O75127 700 aaKnown RBP15.19■□□□□ 0.02
PRPF40B-213ENST00000551269 ZNF853P0CG23 659 aa15.19■□□□□ 0.02
PRPF40B-213ENST00000551269 TSR2Q969E8 191 aaKnown RBP15.19■□□□□ 0.02
PRPF40B-213ENST00000551269 HEG1Q9ULI3 1381 aa15.19■□□□□ 0.02
PRPF40B-213ENST00000551269 C4AP0C0L4 1744 aa15.17■□□□□ 0.02
PRPF40B-213ENST00000551269 LOC102724428A0A0B4J2F2 783 aa15.17■□□□□ 0.02
PRPF40B-213ENST00000551269 SIK1P57059 783 aa15.17■□□□□ 0.02
PRPF40B-213ENST00000551269 CCNL1Q9UK58 526 aaPredicted RBP15.17■□□□□ 0.02
PRPF40B-213ENST00000551269 PLSCR1O15162 318 aa15.16■□□□□ 0.02
PRPF40B-213ENST00000551269 KCNQ3O43525 872 aa15.16■□□□□ 0.02
PRPF40B-213ENST00000551269 EIF4A1P60842 406 aaKnown RBP15.16■□□□□ 0.02
PRPF40B-213ENST00000551269 SLFN5Q08AF3 891 aa15.16■□□□□ 0.02
PRPF40B-213ENST00000551269 ZNF496Q96IT1 587 aaPredicted RBP15.16■□□□□ 0.02
PRPF40B-213ENST00000551269 ATP6V1AP38606 617 aa15.15■□□□□ 0.02
PRPF40B-213ENST00000551269 SLC27A3Q5K4L6 730 aa15.15■□□□□ 0.02
PRPF40B-213ENST00000551269 UPF1Q92900 1129 aaKnown RBP eCLIP15.15■□□□□ 0.02
PRPF40B-213ENST00000551269 CDCA7LQ96GN5 454 aa15.15■□□□□ 0.02
PRPF40B-213ENST00000551269 SPINK5Q9NQ38 1064 aaPredicted RBP15.15■□□□□ 0.02
PRPF40B-213ENST00000551269 BCORQ6W2J9 1755 aa15.14■□□□□ 0.01
PRPF40B-213ENST00000551269 SNRPA1P09661 255 aaKnown RBP15.14■□□□□ 0.01
PRPF40B-213ENST00000551269 HMGB2P26583 209 aaKnown RBP15.14■□□□□ 0.01
PRPF40B-213ENST00000551269 EN1Q05925 392 aaPredicted RBP15.14■□□□□ 0.01
PRPF40B-213ENST00000551269 VSIG10Q8N0Z9 540 aa15.14■□□□□ 0.01
PRPF40B-213ENST00000551269 SOS1Q07889 1333 aaPredicted RBP15.14■□□□□ 0.01
PRPF40B-213ENST00000551269 SCN7AQ01118 1682 aa15.13■□□□□ 0.01
PRPF40B-213ENST00000551269 TXNRD1Q16881 649 aa15.13■□□□□ 0.01
PRPF40B-213ENST00000551269 DEFB132Q7Z7B7 95 aa15.13■□□□□ 0.01
PRPF40B-213ENST00000551269 ANKRD36CQ5JPF3 1778 aa15.12■□□□□ 0.01
PRPF40B-213ENST00000551269 ARFGEF2Q9Y6D5 1785 aa15.12■□□□□ 0.01
PRPF40B-213ENST00000551269 HOXB7P09629 217 aa15.12■□□□□ 0.01
PRPF40B-213ENST00000551269 EXOSC9Q06265 439 aaKnown RBP15.12■□□□□ 0.01
PRPF40B-213ENST00000551269 EZH2Q15910 746 aaKnown RBP15.12■□□□□ 0.01
PRPF40B-213ENST00000551269 TWISTNBQ3B726 338 aaPredicted RBP15.12■□□□□ 0.01
PRPF40B-213ENST00000551269 DUSP27Q5VZP5 1158 aa15.12■□□□□ 0.01
PRPF40B-213ENST00000551269 TEX13AQ9BXU3 409 aaPredicted RBP15.12■□□□□ 0.01
PRPF40B-213ENST00000551269 GIGYF1O75420 1035 aaPredicted RBP15.11■□□□□ 0.01
PRPF40B-213ENST00000551269 STARD3NLO95772 234 aa15.11■□□□□ 0.01
PRPF40B-213ENST00000551269 KRT24Q2M2I5 525 aa15.11■□□□□ 0.01
PRPF40B-213ENST00000551269 DNAJC10Q8IXB1 793 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms