RNA–Protein interactions for RNA: ENST00000551223.5

PFDN5-215, Transcript of prefoldin subunit 5, humanhuman

TSL 4

Gene PFDN5, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-215ENST00000551223 NFE2L2Q16236 605 aa12.57□□□□□ -0.4
PFDN5-215ENST00000551223 MAPK8IP3Q9UPT6 1336 aa12.57□□□□□ -0.4
PFDN5-215ENST00000551223 VIRMAQ69YN4 1812 aaKnown RBP12.56□□□□□ -0.4
PFDN5-215ENST00000551223 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
PFDN5-215ENST00000551223 HTATSF1O43719 755 aaKnown RBP12.56□□□□□ -0.4
PFDN5-215ENST00000551223 SIK1P57059 783 aa12.56□□□□□ -0.4
PFDN5-215ENST00000551223 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
PFDN5-215ENST00000551223 RTF1Q92541 710 aaKnown RBP12.56□□□□□ -0.4
PFDN5-215ENST00000551223 MRS2Q9HD23 443 aa12.56□□□□□ -0.4
PFDN5-215ENST00000551223 MRC1P22897 1456 aa12.56□□□□□ -0.4
PFDN5-215ENST00000551223 CEMIPQ8WUJ3 1361 aa12.56□□□□□ -0.4
PFDN5-215ENST00000551223 TEFQ10587 303 aa12.55□□□□□ -0.4
PFDN5-215ENST00000551223 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
PFDN5-215ENST00000551223 SLC15A2Q16348 729 aa12.55□□□□□ -0.4
PFDN5-215ENST00000551223 MCM10Q7L590 875 aa12.55□□□□□ -0.4
PFDN5-215ENST00000551223 PNISRQ8TF01 805 aaKnown RBP12.55□□□□□ -0.4
PFDN5-215ENST00000551223 RUNDC1Q96C34 613 aa12.55□□□□□ -0.4
PFDN5-215ENST00000551223 STK32BQ9NY57 414 aa12.55□□□□□ -0.4
PFDN5-215ENST00000551223 TMPOP42166 694 aaKnown RBP12.54□□□□□ -0.4
PFDN5-215ENST00000551223 SLC39A6Q13433 755 aa12.54□□□□□ -0.4
PFDN5-215ENST00000551223 ZNF827Q17R98 1081 aa12.54□□□□□ -0.4
PFDN5-215ENST00000551223 AKT1S1Q96B36 256 aa12.54□□□□□ -0.4
PFDN5-215ENST00000551223 SLC4A9Q96Q91 983 aa12.54□□□□□ -0.4
PFDN5-215ENST00000551223 RBM42Q9BTD8 480 aaKnown RBP12.54□□□□□ -0.4
PFDN5-215ENST00000551223 PAPPAQ13219 1627 aa12.54□□□□□ -0.4
PFDN5-215ENST00000551223 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
PFDN5-215ENST00000551223 PTCD1O75127 700 aaKnown RBP12.53□□□□□ -0.4
PFDN5-215ENST00000551223 ATP6V1AP38606 617 aa12.53□□□□□ -0.4
PFDN5-215ENST00000551223 RIPK4P57078 832 aa12.53□□□□□ -0.4
PFDN5-215ENST00000551223 ITPK1Q13572 414 aa12.53□□□□□ -0.4
PFDN5-215ENST00000551223 RRP7AQ9Y3A4 280 aaKnown RBP12.53□□□□□ -0.4
PFDN5-215ENST00000551223 HMGB2P26583 209 aaKnown RBP12.51□□□□□ -0.41
PFDN5-215ENST00000551223 NEUROD2Q15784 382 aa12.51□□□□□ -0.41
PFDN5-215ENST00000551223 LINC00116Q8NCU8 138 aa12.51□□□□□ -0.41
PFDN5-215ENST00000551223 THUMPD2Q9BTF0 503 aaKnown RBP12.51□□□□□ -0.41
PFDN5-215ENST00000551223 PDGFDQ9GZP0 370 aaPredicted RBP12.51□□□□□ -0.41
PFDN5-215ENST00000551223 SIPA1L3O60292 1781 aaPredicted RBP12.51□□□□□ -0.41
PFDN5-215ENST00000551223 TAF1LQ8IZX4 1826 aa12.51□□□□□ -0.41
PFDN5-215ENST00000551223 BTBD11A6QL63 1104 aa12.5□□□□□ -0.41
PFDN5-215ENST00000551223 TAF7Q15545 349 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-215ENST00000551223 DIEXFQ68CQ4 756 aaKnown RBP12.5□□□□□ -0.41
PFDN5-215ENST00000551223 ZNF790Q6PG37 636 aa12.5□□□□□ -0.41
PFDN5-215ENST00000551223 TFCP2L1Q9NZI6 479 aa12.5□□□□□ -0.41
PFDN5-215ENST00000551223 C5P01031 1676 aa12.5□□□□□ -0.41
PFDN5-215ENST00000551223 APAF1O14727 1248 aa12.49□□□□□ -0.41
PFDN5-215ENST00000551223 KCNQ3O43525 872 aa12.49□□□□□ -0.41
PFDN5-215ENST00000551223 TTC5Q8N0Z6 440 aa12.49□□□□□ -0.41
PFDN5-215ENST00000551223 TRIM35Q9UPQ4 493 aa12.49□□□□□ -0.41
PFDN5-215ENST00000551223 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
PFDN5-215ENST00000551223 KCPQ6ZWJ8 1503 aa12.48□□□□□ -0.41
PFDN5-215ENST00000551223 PNPLA7Q6ZV29 1317 aa12.48□□□□□ -0.41
PFDN5-215ENST00000551223 LMOD3Q0VAK6 560 aa12.48□□□□□ -0.41
PFDN5-215ENST00000551223 DNAJC10Q8IXB1 793 aa12.48□□□□□ -0.41
PFDN5-215ENST00000551223 ZNF496Q96IT1 587 aaPredicted RBP12.48□□□□□ -0.41
PFDN5-215ENST00000551223 MIS18AQ9NYP9 233 aa12.48□□□□□ -0.41
PFDN5-215ENST00000551223 C4BP0C0L5 1744 aa12.48□□□□□ -0.41
PFDN5-215ENST00000551223 AMIGO3Q86WK7 504 aa12.47□□□□□ -0.41
PFDN5-215ENST00000551223 FAM9BQ8IZU0 186 aa12.47□□□□□ -0.41
PFDN5-215ENST00000551223 VSIG10Q8N0Z9 540 aa12.47□□□□□ -0.41
PFDN5-215ENST00000551223 AK7Q96M32 723 aa12.47□□□□□ -0.41
PFDN5-215ENST00000551223 UBR2Q8IWV8 1755 aa12.46□□□□□ -0.41
PFDN5-215ENST00000551223 CNTNAP4Q9C0A0 1308 aa12.46□□□□□ -0.41
PFDN5-215ENST00000551223 GNPATO15228 680 aa12.46□□□□□ -0.41
PFDN5-215ENST00000551223 RC3H1Q5TC82 1133 aaKnown RBP12.46□□□□□ -0.41
PFDN5-215ENST00000551223 SMIM5Q71RC9 77 aa12.46□□□□□ -0.41
PFDN5-215ENST00000551223 COL23A1Q86Y22 540 aaPredicted RBP12.46□□□□□ -0.41
PFDN5-215ENST00000551223 FMNL2Q96PY5 1086 aa12.46□□□□□ -0.41
PFDN5-215ENST00000551223 TUBGCP6Q96RT7 1819 aa12.46□□□□□ -0.42
PFDN5-215ENST00000551223 CASZ1Q86V15 1759 aa12.46□□□□□ -0.42
PFDN5-215ENST00000551223 TJP1Q07157 1748 aa12.45□□□□□ -0.42
PFDN5-215ENST00000551223 HEG1Q9ULI3 1381 aa12.45□□□□□ -0.42
PFDN5-215ENST00000551223 SENP3-EIF4A1A0A087X0R7 540 aa12.45□□□□□ -0.42
PFDN5-215ENST00000551223 CCER2I3L3R5 266 aa12.45□□□□□ -0.42
PFDN5-215ENST00000551223 ZBTB7AO95365 584 aa12.45□□□□□ -0.42
PFDN5-215ENST00000551223 CYP19A1P11511 503 aaPredicted RBP12.45□□□□□ -0.42
PFDN5-215ENST00000551223 CRKLP46109 303 aaKnown RBP12.45□□□□□ -0.42
PFDN5-215ENST00000551223 COL5A3P25940 1745 aaPredicted RBP12.45□□□□□ -0.42
PFDN5-215ENST00000551223 QSER1Q2KHR3 1735 aa12.45□□□□□ -0.42
PFDN5-215ENST00000551223 MYH14Q7Z406 1995 aaKnown RBP12.45□□□□□ -0.42
PFDN5-215ENST00000551223 CICQ96RK0 1608 aaPredicted RBP12.44□□□□□ -0.42
PFDN5-215ENST00000551223 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.44□□□□□ -0.42
PFDN5-215ENST00000551223 PHF14O94880 888 aa12.44□□□□□ -0.42
PFDN5-215ENST00000551223 INTS5Q6P9B9 1019 aaKnown RBP12.44□□□□□ -0.42
PFDN5-215ENST00000551223 FLAD1Q8NFF5 587 aa12.44□□□□□ -0.42
PFDN5-215ENST00000551223 UBR3Q6ZT12 1888 aa12.44□□□□□ -0.42
PFDN5-215ENST00000551223 MSH5O43196 834 aa12.43□□□□□ -0.42
PFDN5-215ENST00000551223 RPS6KA4O75676 772 aa12.43□□□□□ -0.42
PFDN5-215ENST00000551223 SSFA2P28290 1259 aa12.43□□□□□ -0.42
PFDN5-215ENST00000551223 MIER1Q8N108 512 aa12.43□□□□□ -0.42
PFDN5-215ENST00000551223 SLC16A10Q8TF71 515 aa12.43□□□□□ -0.42
PFDN5-215ENST00000551223 TEX13AQ9BXU3 409 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-215ENST00000551223 SPON1Q9HCB6 807 aa12.43□□□□□ -0.42
PFDN5-215ENST00000551223 CCDC87Q9NVE4 849 aa12.43□□□□□ -0.42
PFDN5-215ENST00000551223 ATF5Q9Y2D1 282 aaPredicted RBP12.43□□□□□ -0.42
PFDN5-215ENST00000551223 RTCBQ9Y3I0 505 aaKnown RBP12.43□□□□□ -0.42
PFDN5-215ENST00000551223 PRAMEF22A3QJZ6 481 aa12.42□□□□□ -0.42
PFDN5-215ENST00000551223 CHL1O00533 1208 aa12.42□□□□□ -0.42
PFDN5-215ENST00000551223 STARD3NLO95772 234 aa12.42□□□□□ -0.42
PFDN5-215ENST00000551223 SNRPA1P09661 255 aaKnown RBP12.42□□□□□ -0.42
PFDN5-215ENST00000551223 EIF4A1P60842 406 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms