RNA–Protein interactions for RNA: ENST00000551216.2

SCN8A-207, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-207ENST00000551216 EIF4A1P60842 406 aaKnown RBP18.19■□□□□ 0.5
SCN8A-207ENST00000551216 SPG7Q9UQ90 795 aa18.19■□□□□ 0.5
SCN8A-207ENST00000551216 SCN11AQ9UI33 1791 aa18.18■□□□□ 0.5
SCN8A-207ENST00000551216 PKD1L3Q7Z443 1732 aa18.18■□□□□ 0.5
SCN8A-207ENST00000551216 FLIIQ13045 1269 aa18.18■□□□□ 0.5
SCN8A-207ENST00000551216 CHD1LQ86WJ1 897 aa18.18■□□□□ 0.5
SCN8A-207ENST00000551216 NOP58Q9Y2X3 529 aaKnown RBP18.18■□□□□ 0.5
SCN8A-207ENST00000551216 NHSL1Q5SYE7 1610 aa18.18■□□□□ 0.5
SCN8A-207ENST00000551216 TATP17735 454 aaPredicted RBP18.17■□□□□ 0.5
SCN8A-207ENST00000551216 ERICH6Q7L0X2 663 aa18.17■□□□□ 0.5
SCN8A-207ENST00000551216 ANKRD44Q8N8A2 993 aa18.17■□□□□ 0.5
SCN8A-207ENST00000551216 LGR6Q9HBX8 967 aa18.17■□□□□ 0.5
SCN8A-207ENST00000551216 ZBTB47Q9UFB7 747 aaPredicted RBP18.17■□□□□ 0.5
SCN8A-207ENST00000551216 HEG1Q9ULI3 1381 aa18.17■□□□□ 0.5
SCN8A-207ENST00000551216 BTBD11A6QL63 1104 aa18.16■□□□□ 0.5
SCN8A-207ENST00000551216 HDGFL1Q5TGJ6 251 aa18.16■□□□□ 0.5
SCN8A-207ENST00000551216 ATP10DQ9P241 1426 aa18.16■□□□□ 0.5
SCN8A-207ENST00000551216 DDX17Q92841 729 aaKnown RBP18.16■□□□□ 0.5
SCN8A-207ENST00000551216 DCTPP1Q9H773 170 aa18.16■□□□□ 0.5
SCN8A-207ENST00000551216 NLRP2Q9NX02 1062 aa18.16■□□□□ 0.5
SCN8A-207ENST00000551216 SIRT2Q8IXJ6 389 aa18.15■□□□□ 0.5
SCN8A-207ENST00000551216 HMMRO75330 724 aa18.14■□□□□ 0.49
SCN8A-207ENST00000551216 HSP90AB1P08238 724 aaKnown RBP18.14■□□□□ 0.49
SCN8A-207ENST00000551216 GNAI3P08754 354 aa18.14■□□□□ 0.49
SCN8A-207ENST00000551216 ABCA3Q99758 1704 aa18.14■□□□□ 0.49
SCN8A-207ENST00000551216 PARP4Q9UKK3 1724 aaKnown RBP18.13■□□□□ 0.49
SCN8A-207ENST00000551216 FKBP5Q13451 457 aaPredicted RBP18.13■□□□□ 0.49
SCN8A-207ENST00000551216 MPRIPQ6WCQ1 1025 aa18.13■□□□□ 0.49
SCN8A-207ENST00000551216 G2E3Q7L622 706 aa18.13■□□□□ 0.49
SCN8A-207ENST00000551216 ANP32EQ9BTT0 268 aa18.13■□□□□ 0.49
SCN8A-207ENST00000551216 UPF2Q9HAU5 1272 aaKnown RBP18.13■□□□□ 0.49
SCN8A-207ENST00000551216 MRC1P22897 1456 aa18.13■□□□□ 0.49
SCN8A-207ENST00000551216 EIF5BO60841 1220 aaKnown RBP18.12■□□□□ 0.49
SCN8A-207ENST00000551216 IFNL2Q8IZJ0 200 aa18.12■□□□□ 0.49
SCN8A-207ENST00000551216 CSB-PGBD3P0DP91 1061 aa18.12■□□□□ 0.49
SCN8A-207ENST00000551216 CEP85Q6P2H3 762 aa18.12■□□□□ 0.49
SCN8A-207ENST00000551216 NPM2Q86SE8 214 aaKnown RBP18.12■□□□□ 0.49
SCN8A-207ENST00000551216 BMP2KLQ5H9B9 411 aa18.11■□□□□ 0.49
SCN8A-207ENST00000551216 CABLES1Q8TDN4 633 aa18.11■□□□□ 0.49
SCN8A-207ENST00000551216 C1orf115Q9H7X2 142 aa18.11■□□□□ 0.49
SCN8A-207ENST00000551216 MEGF6O75095 1541 aa18.11■□□□□ 0.49
SCN8A-207ENST00000551216 WDR17Q8IZU2 1322 aa18.11■□□□□ 0.49
SCN8A-207ENST00000551216 GNAI2P04899 355 aa18.1■□□□□ 0.49
SCN8A-207ENST00000551216 PHKG2P15735 406 aa18.1■□□□□ 0.49
SCN8A-207ENST00000551216 ANKRD45Q5TZF3 282 aa18.1■□□□□ 0.49
SCN8A-207ENST00000551216 DCAF5Q96JK2 942 aa18.1■□□□□ 0.49
SCN8A-207ENST00000551216 DBF4Q9UBU7 674 aaPredicted RBP18.1■□□□□ 0.49
SCN8A-207ENST00000551216 IBTKQ9P2D0 1353 aaPredicted RBP18.09■□□□□ 0.49
SCN8A-207ENST00000551216 MEIS3Q99687 375 aa18.09■□□□□ 0.49
SCN8A-207ENST00000551216 GIGYF1O75420 1035 aaPredicted RBP18.09■□□□□ 0.49
SCN8A-207ENST00000551216 PLEKHG5O94827 1062 aa18.09■□□□□ 0.49
SCN8A-207ENST00000551216 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
SCN8A-207ENST00000551216 LNPKQ9C0E8 428 aa18.09■□□□□ 0.49
SCN8A-207ENST00000551216 SLC52A2Q9HAB3 445 aa18.09■□□□□ 0.49
SCN8A-207ENST00000551216 PRDM11Q9NQV5 511 aa18.09■□□□□ 0.49
SCN8A-207ENST00000551216 KDM6AO15550 1401 aaPredicted RBP18.08■□□□□ 0.48
SCN8A-207ENST00000551216 COL5A2P05997 1499 aaPredicted RBP18.07■□□□□ 0.48
SCN8A-207ENST00000551216 F6X3S4 739 aa18.07■□□□□ 0.48
SCN8A-207ENST00000551216 CHRNA2Q15822 529 aa18.06■□□□□ 0.48
SCN8A-207ENST00000551216 HYPKQ9NX55 129 aa18.06■□□□□ 0.48
SCN8A-207ENST00000551216 HDAC5Q9UQL6 1122 aa18.06■□□□□ 0.48
SCN8A-207ENST00000551216 ZNF790Q6PG37 636 aa18.05■□□□□ 0.48
SCN8A-207ENST00000551216 CARD10Q9BWT7 1032 aa18.05■□□□□ 0.48
SCN8A-207ENST00000551216 SRCIN1Q9C0H9 1055 aa18.04■□□□□ 0.48
SCN8A-207ENST00000551216 CHPF2Q9P2E5 772 aa18.04■□□□□ 0.48
SCN8A-207ENST00000551216 KCNQ3O43525 872 aa18.03■□□□□ 0.48
SCN8A-207ENST00000551216 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
SCN8A-207ENST00000551216 DNAAF4Q8WXU2 420 aa18.03■□□□□ 0.48
SCN8A-207ENST00000551216 TBC1D32Q96NH3 1257 aa18.03■□□□□ 0.48
SCN8A-207ENST00000551216 PCDH11XQ9BZA7 1347 aa18.03■□□□□ 0.48
SCN8A-207ENST00000551216 PCDH11YQ9BZA8 1340 aa18.03■□□□□ 0.48
SCN8A-207ENST00000551216 AHDC1Q5TGY3 1603 aaPredicted RBP18.03■□□□□ 0.48
SCN8A-207ENST00000551216 ATP8B2P98198 1209 aa18.02■□□□□ 0.48
SCN8A-207ENST00000551216 DDX21Q9NR30 783 aaKnown RBP eCLIP18.02■□□□□ 0.48
SCN8A-207ENST00000551216 DAXXQ9UER7 740 aaPredicted RBP18.02■□□□□ 0.48
SCN8A-207ENST00000551216 CYP27B1O15528 508 aa18.01■□□□□ 0.47
SCN8A-207ENST00000551216 ALDH1L1O75891 902 aa18.01■□□□□ 0.47
SCN8A-207ENST00000551216 NECTIN2Q92692 538 aa18.01■□□□□ 0.47
SCN8A-207ENST00000551216 USP44Q9H0E7 712 aa18.01■□□□□ 0.47
SCN8A-207ENST00000551216 PHAXQ9H814 394 aaKnown RBP18.01■□□□□ 0.47
SCN8A-207ENST00000551216 COL22A1Q8NFW1 1626 aaPredicted RBP18.01■□□□□ 0.47
SCN8A-207ENST00000551216 DDX58O95786 925 aaKnown RBP18.01■□□□□ 0.47
SCN8A-207ENST00000551216 UBTFL1P0CB47 393 aaPredicted RBP18.01■□□□□ 0.47
SCN8A-207ENST00000551216 MYT1Q01538 1121 aa18.01■□□□□ 0.47
SCN8A-207ENST00000551216 NKX1-1Q15270 411 aaPredicted RBP18.01■□□□□ 0.47
SCN8A-207ENST00000551216 TOM1L2Q6ZVM7 507 aa18.01■□□□□ 0.47
SCN8A-207ENST00000551216 SEC24BO95487 1268 aa18■□□□□ 0.47
SCN8A-207ENST00000551216 BEND3Q5T5X7 828 aa18■□□□□ 0.47
SCN8A-207ENST00000551216 KSR2Q6VAB6 950 aa18■□□□□ 0.47
SCN8A-207ENST00000551216 ERVV-2B6SEH9 535 aa17.99■□□□□ 0.47
SCN8A-207ENST00000551216 PLEKHM2Q8IWE5 1019 aa17.99■□□□□ 0.47
SCN8A-207ENST00000551216 NFATC2IPQ8NCF5 419 aa17.99■□□□□ 0.47
SCN8A-207ENST00000551216 ZCRB1Q8TBF4 217 aaKnown RBP17.99■□□□□ 0.47
SCN8A-207ENST00000551216 ADCY9O60503 1353 aa17.99■□□□□ 0.47
SCN8A-207ENST00000551216 LAMB4A4D0S4 1761 aa17.98■□□□□ 0.47
SCN8A-207ENST00000551216 COL14A1Q05707 1796 aaKnown RBP17.98■□□□□ 0.47
SCN8A-207ENST00000551216 PI4KAP2A4QPH2 592 aa17.98■□□□□ 0.47
SCN8A-207ENST00000551216 IL2RBP14784 551 aa17.98■□□□□ 0.47
SCN8A-207ENST00000551216 BECN1Q14457 450 aa17.98■□□□□ 0.47
SCN8A-207ENST00000551216 AEBP2Q6ZN18 517 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms