RNA–Protein interactions for RNA: ENST00000551206.5

USP15-217, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-217ENST00000551206 AKT1S1Q96B36 256 aa17.47■□□□□ 0.39
USP15-217ENST00000551206 SPON1Q9HCB6 807 aa17.47■□□□□ 0.39
USP15-217ENST00000551206 ATG3Q9NT62 314 aa17.47■□□□□ 0.39
USP15-217ENST00000551206 NFATC2IPQ8NCF5 419 aa17.46■□□□□ 0.39
USP15-217ENST00000551206 LGR6Q9HBX8 967 aa17.46■□□□□ 0.39
USP15-217ENST00000551206 ATF5Q9Y2D1 282 aaPredicted RBP17.46■□□□□ 0.39
USP15-217ENST00000551206 TOGARAM1Q9Y4F4 1720 aa17.46■□□□□ 0.39
USP15-217ENST00000551206 KDM6AO15550 1401 aaPredicted RBP17.45■□□□□ 0.38
USP15-217ENST00000551206 LOC102724428A0A0B4J2F2 783 aa17.44■□□□□ 0.38
USP15-217ENST00000551206 PRKAR2BP31323 418 aa17.44■□□□□ 0.38
USP15-217ENST00000551206 SIK1P57059 783 aa17.44■□□□□ 0.38
USP15-217ENST00000551206 RALBP1Q15311 655 aa17.44■□□□□ 0.38
USP15-217ENST00000551206 PHACTR3Q96KR7 559 aa17.44■□□□□ 0.38
USP15-217ENST00000551206 ITGB4P16144 1822 aa17.44■□□□□ 0.38
USP15-217ENST00000551206 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
USP15-217ENST00000551206 RNMTO43148 476 aaKnown RBP17.42■□□□□ 0.38
USP15-217ENST00000551206 ATP6V1AP38606 617 aa17.42■□□□□ 0.38
USP15-217ENST00000551206 RSPH6AQ9H0K4 717 aa17.42■□□□□ 0.38
USP15-217ENST00000551206 PPP1R1BQ9UD71 204 aaPredicted RBP17.42■□□□□ 0.38
USP15-217ENST00000551206 GAS2L2Q8NHY3 880 aa17.41■□□□□ 0.38
USP15-217ENST00000551206 PTCD1O75127 700 aaKnown RBP17.4■□□□□ 0.38
USP15-217ENST00000551206 FCHSD2O94868 740 aa17.4■□□□□ 0.38
USP15-217ENST00000551206 ITPK1Q13572 414 aa17.4■□□□□ 0.38
USP15-217ENST00000551206 LY75O60449 1722 aa17.4■□□□□ 0.38
USP15-217ENST00000551206 PNPLA7Q6ZV29 1317 aa17.4■□□□□ 0.38
USP15-217ENST00000551206 PAPPAQ13219 1627 aa17.39■□□□□ 0.38
USP15-217ENST00000551206 GNAT3A8MTJ3 354 aa17.39■□□□□ 0.37
USP15-217ENST00000551206 HMGB2P26583 209 aaKnown RBP17.39■□□□□ 0.37
USP15-217ENST00000551206 SMIM5Q71RC9 77 aa17.39■□□□□ 0.37
USP15-217ENST00000551206 LINC00116Q8NCU8 138 aa17.39■□□□□ 0.37
USP15-217ENST00000551206 AK7Q96M32 723 aa17.39■□□□□ 0.37
USP15-217ENST00000551206 MTFR1LQ9H019 292 aa17.39■□□□□ 0.37
USP15-217ENST00000551206 SLC52A2Q9HAB3 445 aa17.39■□□□□ 0.37
USP15-217ENST00000551206 COL23A1Q86Y22 540 aaPredicted RBP17.38■□□□□ 0.37
USP15-217ENST00000551206 SLC4A9Q96Q91 983 aa17.38■□□□□ 0.37
USP15-217ENST00000551206 LRP5O75197 1615 aa17.37■□□□□ 0.37
USP15-217ENST00000551206 ZNF316A6NFI3 1004 aaPredicted RBP17.37■□□□□ 0.37
USP15-217ENST00000551206 PTGER2P43116 358 aa17.37■□□□□ 0.37
USP15-217ENST00000551206 SLC39A6Q13433 755 aa17.37■□□□□ 0.37
USP15-217ENST00000551206 IL17REQ8NFR9 667 aa17.37■□□□□ 0.37
USP15-217ENST00000551206 PHF14O94880 888 aa17.36■□□□□ 0.37
USP15-217ENST00000551206 CASZ1Q86V15 1759 aa17.35■□□□□ 0.37
USP15-217ENST00000551206 AMIGO3Q86WK7 504 aa17.35■□□□□ 0.37
USP15-217ENST00000551206 SLC16A10Q8TF71 515 aa17.35■□□□□ 0.37
USP15-217ENST00000551206 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
USP15-217ENST00000551206 MAP3K5Q99683 1374 aa17.35■□□□□ 0.37
USP15-217ENST00000551206 GNPATO15228 680 aa17.34■□□□□ 0.37
USP15-217ENST00000551206 NEFMP07197 916 aa17.34■□□□□ 0.37
USP15-217ENST00000551206 TEFQ10587 303 aa17.34■□□□□ 0.37
USP15-217ENST00000551206 SAMD1Q6SPF0 538 aaPredicted RBP17.34■□□□□ 0.37
USP15-217ENST00000551206 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.33■□□□□ 0.36
USP15-217ENST00000551206 MSL1Q68DK7 614 aa17.33■□□□□ 0.36
USP15-217ENST00000551206 FLAD1Q8NFF5 587 aa17.33■□□□□ 0.36
USP15-217ENST00000551206 RTF1Q92541 710 aaKnown RBP17.32■□□□□ 0.36
USP15-217ENST00000551206 PRKRIP1Q9H875 184 aaPredicted RBP17.32■□□□□ 0.36
USP15-217ENST00000551206 SCN11AQ9UI33 1791 aa17.31■□□□□ 0.36
USP15-217ENST00000551206 DCTN1Q14203 1278 aa17.31■□□□□ 0.36
USP15-217ENST00000551206 MCM10Q7L590 875 aa17.31■□□□□ 0.36
USP15-217ENST00000551206 ARXQ96QS3 562 aa17.31■□□□□ 0.36
USP15-217ENST00000551206 SGIP1Q9BQI5 828 aa17.31■□□□□ 0.36
USP15-217ENST00000551206 C5P01031 1676 aa17.31■□□□□ 0.36
USP15-217ENST00000551206 POLD1P28340 1107 aa17.3■□□□□ 0.36
USP15-217ENST00000551206 PLEKHF1Q96S99 279 aa17.3■□□□□ 0.36
USP15-217ENST00000551206 PNNQ9H307 717 aaKnown RBP17.3■□□□□ 0.36
USP15-217ENST00000551206 RTCBQ9Y3I0 505 aaKnown RBP17.3■□□□□ 0.36
USP15-217ENST00000551206 C4BP0C0L5 1744 aa17.3■□□□□ 0.36
USP15-217ENST00000551206 SSFA2P28290 1259 aa17.29■□□□□ 0.36
USP15-217ENST00000551206 DNAJC10Q8IXB1 793 aa17.29■□□□□ 0.36
USP15-217ENST00000551206 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
USP15-217ENST00000551206 TAF1LQ8IZX4 1826 aa17.28■□□□□ 0.36
USP15-217ENST00000551206 TRAPPC3LQ5T215 181 aa17.28■□□□□ 0.36
USP15-217ENST00000551206 RC3H1Q5TC82 1133 aaKnown RBP17.28■□□□□ 0.36
USP15-217ENST00000551206 KLHL34Q8N239 644 aa17.28■□□□□ 0.36
USP15-217ENST00000551206 FHDC1Q9C0D6 1143 aaPredicted RBP17.28■□□□□ 0.36
USP15-217ENST00000551206 MAPK8IP3Q9UPT6 1336 aa17.27■□□□□ 0.36
USP15-217ENST00000551206 BTBD11A6QL63 1104 aa17.27■□□□□ 0.36
USP15-217ENST00000551206 CRKLP46109 303 aaKnown RBP17.27■□□□□ 0.36
USP15-217ENST00000551206 ZNF790Q6PG37 636 aa17.27■□□□□ 0.36
USP15-217ENST00000551206 TUBGCP6Q96RT7 1819 aa17.26■□□□□ 0.35
USP15-217ENST00000551206 CNTNAP4Q9C0A0 1308 aa17.26■□□□□ 0.35
USP15-217ENST00000551206 MRC1P22897 1456 aa17.26■□□□□ 0.35
USP15-217ENST00000551206 KCNQ3O43525 872 aa17.26■□□□□ 0.35
USP15-217ENST00000551206 HTATSF1O43719 755 aaKnown RBP17.26■□□□□ 0.35
USP15-217ENST00000551206 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
USP15-217ENST00000551206 WDR43Q15061 677 aaKnown RBP eCLIP17.26■□□□□ 0.35
USP15-217ENST00000551206 NFE2L2Q16236 605 aa17.26■□□□□ 0.35
USP15-217ENST00000551206 ZNF496Q96IT1 587 aaPredicted RBP17.26■□□□□ 0.35
USP15-217ENST00000551206 CEMIPQ8WUJ3 1361 aa17.26■□□□□ 0.35
USP15-217ENST00000551206 KCNA4P22459 653 aa17.25■□□□□ 0.35
USP15-217ENST00000551206 INTS5Q6P9B9 1019 aaKnown RBP17.25■□□□□ 0.35
USP15-217ENST00000551206 CCDC146Q8IYE0 955 aa17.25■□□□□ 0.35
USP15-217ENST00000551206 ARHGEF1Q92888 912 aaKnown RBP17.25■□□□□ 0.35
USP15-217ENST00000551206 SYT17Q9BSW7 474 aa17.25■□□□□ 0.35
USP15-217ENST00000551206 CYP19A1P11511 503 aaPredicted RBP17.24■□□□□ 0.35
USP15-217ENST00000551206 RFC4P35249 363 aa17.24■□□□□ 0.35
USP15-217ENST00000551206 THUMPD2Q9BTF0 503 aaKnown RBP17.24■□□□□ 0.35
USP15-217ENST00000551206 MIS18AQ9NYP9 233 aa17.24■□□□□ 0.35
USP15-217ENST00000551206 ADAMTS8Q9UP79 889 aa17.24■□□□□ 0.35
USP15-217ENST00000551206 QSER1Q2KHR3 1735 aa17.24■□□□□ 0.35
USP15-217ENST00000551206 CHRDL2Q6WN34 429 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms