RNA–Protein interactions for RNA: ENST00000550869.5

ERBB3-216, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-216ENST00000550869 AEBP1Q8IUX7 1158 aa16■□□□□ 0.15
ERBB3-216ENST00000550869 USHBP1Q8N6Y0 703 aa16■□□□□ 0.15
ERBB3-216ENST00000550869 ZNF784Q8NCA9 323 aaPredicted RBP16■□□□□ 0.15
ERBB3-216ENST00000550869 ITGB4P16144 1822 aa15.99■□□□□ 0.15
ERBB3-216ENST00000550869 PRKAR2BP31323 418 aa15.99■□□□□ 0.15
ERBB3-216ENST00000550869 CCDC146Q8IYE0 955 aa15.99■□□□□ 0.15
ERBB3-216ENST00000550869 NGEFQ8N5V2 710 aa15.99■□□□□ 0.15
ERBB3-216ENST00000550869 TOGARAM1Q9Y4F4 1720 aa15.99■□□□□ 0.15
ERBB3-216ENST00000550869 PLEKHG2Q9H7P9 1386 aa15.98■□□□□ 0.15
ERBB3-216ENST00000550869 APAF1O14727 1248 aa15.97■□□□□ 0.15
ERBB3-216ENST00000550869 KCNQ4P56696 695 aa15.97■□□□□ 0.15
ERBB3-216ENST00000550869 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
ERBB3-216ENST00000550869 GPR162Q16538 588 aa15.97■□□□□ 0.15
ERBB3-216ENST00000550869 FLAD1Q8NFF5 587 aa15.97■□□□□ 0.15
ERBB3-216ENST00000550869 PHACTR3Q96KR7 559 aa15.97■□□□□ 0.15
ERBB3-216ENST00000550869 PALLDQ8WX93 1383 aa15.97■□□□□ 0.15
ERBB3-216ENST00000550869 SMARCC1Q92922 1105 aaPredicted RBP15.96■□□□□ 0.15
ERBB3-216ENST00000550869 ZBED9Q6R2W3 1325 aa15.95■□□□□ 0.14
ERBB3-216ENST00000550869 CYP27B1O15528 508 aa15.95■□□□□ 0.14
ERBB3-216ENST00000550869 TMPOP42166 694 aaKnown RBP15.95■□□□□ 0.14
ERBB3-216ENST00000550869 ZNF521Q96K83 1311 aa15.94■□□□□ 0.14
ERBB3-216ENST00000550869 C4BP0C0L5 1744 aa15.94■□□□□ 0.14
ERBB3-216ENST00000550869 NKX1-1Q15270 411 aaPredicted RBP15.94■□□□□ 0.14
ERBB3-216ENST00000550869 CCDC27Q2M243 656 aa15.94■□□□□ 0.14
ERBB3-216ENST00000550869 COL23A1Q86Y22 540 aaPredicted RBP15.94■□□□□ 0.14
ERBB3-216ENST00000550869 KLHL34Q8N239 644 aa15.94■□□□□ 0.14
ERBB3-216ENST00000550869 YTHDC1Q96MU7 727 aaKnown RBP15.94■□□□□ 0.14
ERBB3-216ENST00000550869 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.94■□□□□ 0.142e-13■□□□□ 8.8
ERBB3-216ENST00000550869 SPG7Q9UQ90 795 aa15.94■□□□□ 0.14
ERBB3-216ENST00000550869 MSH5O43196 834 aa15.93■□□□□ 0.14
ERBB3-216ENST00000550869 MPRIPQ6WCQ1 1025 aa15.93■□□□□ 0.14
ERBB3-216ENST00000550869 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
ERBB3-216ENST00000550869 NFE2L2Q16236 605 aa15.92■□□□□ 0.14
ERBB3-216ENST00000550869 MAPK8IP3Q9UPT6 1336 aa15.92■□□□□ 0.14
ERBB3-216ENST00000550869 DLG5Q8TDM6 1919 aa15.91■□□□□ 0.14
ERBB3-216ENST00000550869 GRIN3BO60391 1043 aa15.9■□□□□ 0.14
ERBB3-216ENST00000550869 NEFMP07197 916 aa15.9■□□□□ 0.14
ERBB3-216ENST00000550869 MTHFSDQ2M296 383 aaKnown RBP15.9■□□□□ 0.14
ERBB3-216ENST00000550869 NLGN2Q8NFZ4 835 aa15.9■□□□□ 0.14
ERBB3-216ENST00000550869 TRIM35Q9UPQ4 493 aa15.9■□□□□ 0.14
ERBB3-216ENST00000550869 CD2APQ9Y5K6 639 aa15.9■□□□□ 0.14
ERBB3-216ENST00000550869 WWC1Q8IX03 1113 aa15.89■□□□□ 0.13
ERBB3-216ENST00000550869 GAS2L2Q8NHY3 880 aa15.89■□□□□ 0.13
ERBB3-216ENST00000550869 AK7Q96M32 723 aa15.89■□□□□ 0.13
ERBB3-216ENST00000550869 RIPK4P57078 832 aa15.88■□□□□ 0.13
ERBB3-216ENST00000550869 AMOTQ4VCS5 1084 aa15.88■□□□□ 0.13
ERBB3-216ENST00000550869 PELP1Q8IZL8 1130 aaKnown RBP15.88■□□□□ 0.13
ERBB3-216ENST00000550869 PIGBQ92521 554 aa15.88■□□□□ 0.13
ERBB3-216ENST00000550869 ZNF831Q5JPB2 1677 aa15.87■□□□□ 0.13
ERBB3-216ENST00000550869 SSFA2P28290 1259 aa15.87■□□□□ 0.13
ERBB3-216ENST00000550869 PLEKHO1Q53GL0 409 aaPredicted RBP15.87■□□□□ 0.13
ERBB3-216ENST00000550869 IFNL2Q8IZJ0 200 aa15.87■□□□□ 0.13
ERBB3-216ENST00000550869 TMOD3Q9NYL9 352 aa15.87■□□□□ 0.13
ERBB3-216ENST00000550869 RRP7AQ9Y3A4 280 aaKnown RBP15.87■□□□□ 0.13
ERBB3-216ENST00000550869 SENP3-EIF4A1A0A087X0R7 540 aa15.86■□□□□ 0.13
ERBB3-216ENST00000550869 HTATSF1O43719 755 aaKnown RBP15.86■□□□□ 0.13
ERBB3-216ENST00000550869 MSL1Q68DK7 614 aa15.86■□□□□ 0.13
ERBB3-216ENST00000550869 WDR63Q8IWG1 891 aa15.86■□□□□ 0.13
ERBB3-216ENST00000550869 LOC102724428A0A0B4J2F2 783 aa15.85■□□□□ 0.13
ERBB3-216ENST00000550869 PHKG2P15735 406 aa15.85■□□□□ 0.13
ERBB3-216ENST00000550869 SIK1P57059 783 aa15.85■□□□□ 0.13
ERBB3-216ENST00000550869 C1QTNF8P60827 252 aa15.85■□□□□ 0.13
ERBB3-216ENST00000550869 NEUROD2Q15784 382 aa15.85■□□□□ 0.13
ERBB3-216ENST00000550869 SALL2Q9Y467 1007 aaPredicted RBP15.85■□□□□ 0.13
ERBB3-216ENST00000550869 YBX3P16989 372 aaKnown RBP eCLIP15.84■□□□□ 0.131e-6■■■■□ 20.3
ERBB3-216ENST00000550869 LMOD3Q0VAK6 560 aa15.84■□□□□ 0.13
ERBB3-216ENST00000550869 TRMT2AQ8IZ69 625 aaKnown RBP15.84■□□□□ 0.13
ERBB3-216ENST00000550869 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.83■□□□□ 0.12
ERBB3-216ENST00000550869 HSP90AB1P08238 724 aaKnown RBP15.83■□□□□ 0.12
ERBB3-216ENST00000550869 AKAP4Q5JQC9 854 aa15.83■□□□□ 0.12
ERBB3-216ENST00000550869 ADAMTS7Q9UKP4 1686 aa15.83■□□□□ 0.12
ERBB3-216ENST00000550869 GIGYF1O75420 1035 aaPredicted RBP15.82■□□□□ 0.12
ERBB3-216ENST00000550869 LINC00116Q8NCU8 138 aa15.82■□□□□ 0.12
ERBB3-216ENST00000550869 IL16Q14005 1332 aa15.82■□□□□ 0.12
ERBB3-216ENST00000550869 GNAT3A8MTJ3 354 aa15.81■□□□□ 0.12
ERBB3-216ENST00000550869 ERVV-2B6SEH9 535 aa15.81■□□□□ 0.12
ERBB3-216ENST00000550869 GOLGA2Q08379 1002 aa15.81■□□□□ 0.12
ERBB3-216ENST00000550869 SLFN5Q08AF3 891 aa15.81■□□□□ 0.12
ERBB3-216ENST00000550869 CEMIPQ8WUJ3 1361 aa15.81■□□□□ 0.12
ERBB3-216ENST00000550869 ASAP1Q9ULH1 1129 aa15.81■□□□□ 0.12
ERBB3-216ENST00000550869 COL5A3P25940 1745 aaPredicted RBP15.8■□□□□ 0.12
ERBB3-216ENST00000550869 PHF14O94880 888 aa15.8■□□□□ 0.12
ERBB3-216ENST00000550869 ATP6V1AP38606 617 aa15.8■□□□□ 0.12
ERBB3-216ENST00000550869 ZNF530Q6P9A1 599 aaPredicted RBP15.8■□□□□ 0.12
ERBB3-216ENST00000550869 AMIGO3Q86WK7 504 aa15.8■□□□□ 0.12
ERBB3-216ENST00000550869 IL17REQ8NFR9 667 aa15.8■□□□□ 0.12
ERBB3-216ENST00000550869 CDCA7LQ96GN5 454 aa15.8■□□□□ 0.12
ERBB3-216ENST00000550869 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
ERBB3-216ENST00000550869 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
ERBB3-216ENST00000550869 GNPATO15228 680 aa15.79■□□□□ 0.12
ERBB3-216ENST00000550869 ZNF853P0CG23 659 aa15.79■□□□□ 0.12
ERBB3-216ENST00000550869 ATG3Q9NT62 314 aa15.79■□□□□ 0.12
ERBB3-216ENST00000550869 VIRMAQ69YN4 1812 aaKnown RBP15.79■□□□□ 0.12
ERBB3-216ENST00000550869 KIF13BQ9NQT8 1826 aa15.79■□□□□ 0.12
ERBB3-216ENST00000550869 CEP350Q5VT06 3117 aa15.79■□□□□ 0.12
ERBB3-216ENST00000550869 E9PSI1 815 aa15.78■□□□□ 0.12
ERBB3-216ENST00000550869 ITPK1Q13572 414 aa15.78■□□□□ 0.12
ERBB3-216ENST00000550869 DUSP27Q5VZP5 1158 aa15.78■□□□□ 0.12
ERBB3-216ENST00000550869 ADRA2BP18089 450 aa15.77■□□□□ 0.12
ERBB3-216ENST00000550869 CALD1Q05682 793 aaKnown RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms