RNA–Protein interactions for RNA: ENST00000550661.1

PTPRR-210, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 3

Gene PTPRR, Length 1,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-210ENST00000550661 CCDC7Q96M83 1385 aa8.23□□□□□ -1.09
PTPRR-210ENST00000550661 NRKQ7Z2Y5 1582 aa8.23□□□□□ -1.09
PTPRR-210ENST00000550661 BRINP3Q76B58 766 aa8.23□□□□□ -1.09
PTPRR-210ENST00000550661 METTL3Q86U44 580 aaKnown RBP8.23□□□□□ -1.09
PTPRR-210ENST00000550661 WBP1LQ9NX94 342 aa8.23□□□□□ -1.09
PTPRR-210ENST00000550661 TSR3Q9UJK0 312 aaKnown RBP8.23□□□□□ -1.09
PTPRR-210ENST00000550661 KIF7Q2M1P5 1343 aa8.23□□□□□ -1.09
PTPRR-210ENST00000550661 NPHP3Q7Z494 1330 aa8.23□□□□□ -1.09
PTPRR-210ENST00000550661 BRD4O60885 1362 aaPredicted RBP8.22□□□□□ -1.09
PTPRR-210ENST00000550661 ANKRD36BQ8N2N9 1353 aa8.22□□□□□ -1.09
PTPRR-210ENST00000550661 PXDNQ92626 1479 aa8.22□□□□□ -1.09
PTPRR-210ENST00000550661 CD163L1Q9NR16 1453 aa8.22□□□□□ -1.09
PTPRR-210ENST00000550661 PLEKHG3A1L390 1219 aa8.22□□□□□ -1.09
PTPRR-210ENST00000550661 PPP4CP60510 307 aa8.22□□□□□ -1.09
PTPRR-210ENST00000550661 ESCO1Q5FWF5 840 aa8.22□□□□□ -1.09
PTPRR-210ENST00000550661 WASHC2AQ641Q2 1341 aa8.22□□□□□ -1.09
PTPRR-210ENST00000550661 USP6P35125 1406 aa8.21□□□□□ -1.09
PTPRR-210ENST00000550661 CPSF1Q10570 1443 aaKnown RBP8.21□□□□□ -1.09
PTPRR-210ENST00000550661 MON2Q7Z3U7 1717 aa8.21□□□□□ -1.09
PTPRR-210ENST00000550661 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.21□□□□□ -1.1
PTPRR-210ENST00000550661 SLC4A3P48751 1232 aa8.21□□□□□ -1.1
PTPRR-210ENST00000550661 MAP2K5Q13163 448 aa8.21□□□□□ -1.1
PTPRR-210ENST00000550661 SLF2Q8IX21 1173 aa8.21□□□□□ -1.1
PTPRR-210ENST00000550661 ZC3H15Q8WU90 426 aaKnown RBP8.21□□□□□ -1.1
PTPRR-210ENST00000550661 ORAI2Q96SN7 254 aa8.21□□□□□ -1.1
PTPRR-210ENST00000550661 TMEM134Q9H6X4 195 aa8.21□□□□□ -1.1
PTPRR-210ENST00000550661 COL16A1Q07092 1604 aaPredicted RBP8.21□□□□□ -1.1
PTPRR-210ENST00000550661 A0A1W2PP64 1363 aa8.21□□□□□ -1.1
PTPRR-210ENST00000550661 EDC4Q6P2E9 1401 aaKnown RBP8.2□□□□□ -1.1
PTPRR-210ENST00000550661 AKAP12Q02952 1782 aa8.2□□□□□ -1.1
PTPRR-210ENST00000550661 TERF2IPQ9NYB0 399 aa8.2□□□□□ -1.1
PTPRR-210ENST00000550661 SBNO1A3KN83 1393 aa8.2□□□□□ -1.1
PTPRR-210ENST00000550661 TRPM3Q9HCF6 1732 aaPredicted RBP8.2□□□□□ -1.1
PTPRR-210ENST00000550661 TNS3Q68CZ2 1445 aa8.2□□□□□ -1.1
PTPRR-210ENST00000550661 MED1Q15648 1581 aaPredicted RBP8.19□□□□□ -1.1
PTPRR-210ENST00000550661 C11orf95C9JLR9 678 aaPredicted RBP8.19□□□□□ -1.1
PTPRR-210ENST00000550661 IRF6O14896 467 aa8.19□□□□□ -1.1
PTPRR-210ENST00000550661 PIP4K2BP78356 416 aa8.19□□□□□ -1.1
PTPRR-210ENST00000550661 NYAP1Q6ZVC0 841 aa8.19□□□□□ -1.1
PTPRR-210ENST00000550661 HDGFL2Q7Z4V5 671 aaPredicted RBP8.19□□□□□ -1.1
PTPRR-210ENST00000550661 NGDNQ8NEJ9 315 aaKnown RBP8.19□□□□□ -1.1
PTPRR-210ENST00000550661 TMC1Q8TDI8 760 aa8.19□□□□□ -1.1
PTPRR-210ENST00000550661 FBXO41Q8TF61 875 aa8.19□□□□□ -1.1
PTPRR-210ENST00000550661 CABP1Q9NZU7 370 aa8.19□□□□□ -1.1
PTPRR-210ENST00000550661 PHLPP1O60346 1717 aa8.19□□□□□ -1.1
PTPRR-210ENST00000550661 ACEP12821 1306 aa8.19□□□□□ -1.1
PTPRR-210ENST00000550661 SOS2Q07890 1332 aaPredicted RBP8.19□□□□□ -1.1
PTPRR-210ENST00000550661 RGPD8O14715 1765 aaPredicted RBP8.19□□□□□ -1.1
PTPRR-210ENST00000550661 KTN1Q86UP2 1357 aaKnown RBP8.19□□□□□ -1.1
PTPRR-210ENST00000550661 SSH2Q76I76 1423 aa8.19□□□□□ -1.1
PTPRR-210ENST00000550661 KRI1Q8N9T8 703 aaKnown RBP8.18□□□□□ -1.1
PTPRR-210ENST00000550661 PMFBP1Q8TBY8 1022 aa8.18□□□□□ -1.1
PTPRR-210ENST00000550661 NLRP7Q8WX94 980 aa8.18□□□□□ -1.1
PTPRR-210ENST00000550661 ARHGEF10O15013 1369 aa8.18□□□□□ -1.1
PTPRR-210ENST00000550661 NSD3Q9BZ95 1437 aa8.18□□□□□ -1.1
PTPRR-210ENST00000550661 USP54Q70EL1 1684 aa8.18□□□□□ -1.1
PTPRR-210ENST00000550661 ALS2Q96Q42 1657 aa8.18□□□□□ -1.1
PTPRR-210ENST00000550661 FOXO3O43524 673 aa8.17□□□□□ -1.1
PTPRR-210ENST00000550661 ZMYND10O75800 440 aa8.17□□□□□ -1.1
PTPRR-210ENST00000550661 PSME1Q06323 249 aa8.17□□□□□ -1.1
PTPRR-210ENST00000550661 NECTIN2Q92692 538 aa8.17□□□□□ -1.1
PTPRR-210ENST00000550661 CCDC102AQ96A19 550 aa8.17□□□□□ -1.1
PTPRR-210ENST00000550661 PHOX2BQ99453 314 aa8.17□□□□□ -1.1
PTPRR-210ENST00000550661 POLR3GLQ9BT43 218 aa8.17□□□□□ -1.1
PTPRR-210ENST00000550661 SLC12A5Q9H2X9 1139 aa8.17□□□□□ -1.1
PTPRR-210ENST00000550661 TTC21AQ8NDW8 1320 aa8.17□□□□□ -1.1
PTPRR-210ENST00000550661 COL22A1Q8NFW1 1626 aaPredicted RBP8.17□□□□□ -1.1
PTPRR-210ENST00000550661 PIK3C2AO00443 1686 aa8.16□□□□□ -1.1
PTPRR-210ENST00000550661 NSD2O96028 1365 aa8.16□□□□□ -1.1
PTPRR-210ENST00000550661 SHPRHQ149N8 1683 aa8.16□□□□□ -1.1
PTPRR-210ENST00000550661 BARGINQ6ZT62 677 aa8.16□□□□□ -1.1
PTPRR-210ENST00000550661 PLA2G2EQ9NZK7 142 aa8.16□□□□□ -1.1
PTPRR-210ENST00000550661 OVOS2A0A0J9YW53 1432 aa8.15□□□□□ -1.1
PTPRR-210ENST00000550661 OVOS2Q6IE36 1432 aa8.15□□□□□ -1.1
PTPRR-210ENST00000550661 JCADQ9P266 1359 aa8.15□□□□□ -1.1
PTPRR-210ENST00000550661 SPATA31A3Q5VYP0 1347 aa8.15□□□□□ -1.1
PTPRR-210ENST00000550661 KRT28Q7Z3Y7 464 aa8.15□□□□□ -1.1
PTPRR-210ENST00000550661 DAXXQ9UER7 740 aaPredicted RBP8.15□□□□□ -1.1
PTPRR-210ENST00000550661 PNPLA6Q8IY17 1366 aa8.14□□□□□ -1.11
PTPRR-210ENST00000550661 CGNL1Q0VF96 1302 aa8.14□□□□□ -1.11
PTPRR-210ENST00000550661 TTC21BQ7Z4L5 1316 aa8.14□□□□□ -1.11
PTPRR-210ENST00000550661 DDX17Q92841 729 aaKnown RBP8.14□□□□□ -1.11
PTPRR-210ENST00000550661 LRRC59Q96AG4 307 aaKnown RBP8.14□□□□□ -1.11
PTPRR-210ENST00000550661 KIF20BQ96Q89 1820 aa8.14□□□□□ -1.11
PTPRR-210ENST00000550661 SLIT3O75094 1523 aa8.13□□□□□ -1.11
PTPRR-210ENST00000550661 USP31Q70CQ4 1352 aa8.13□□□□□ -1.11
PTPRR-210ENST00000550661 NPC1L1Q9UHC9 1359 aa8.13□□□□□ -1.11
PTPRR-210ENST00000550661 USP19O94966 1318 aa8.13□□□□□ -1.11
PTPRR-210ENST00000550661 ABCA3Q99758 1704 aa8.13□□□□□ -1.11
PTPRR-210ENST00000550661 CRYBG1Q9Y4K1 1723 aa8.13□□□□□ -1.11
PTPRR-210ENST00000550661 HSPA1LP34931 641 aa8.13□□□□□ -1.11
PTPRR-210ENST00000550661 APLP1P51693 650 aa8.13□□□□□ -1.11
PTPRR-210ENST00000550661 XPCQ01831 940 aaPredicted RBP8.13□□□□□ -1.11
PTPRR-210ENST00000550661 PANK3Q9H999 370 aa8.13□□□□□ -1.11
PTPRR-210ENST00000550661 PHRF1Q9P1Y6 1649 aaKnown RBP8.13□□□□□ -1.11
PTPRR-210ENST00000550661 ANKRD26Q9UPS8 1709 aa8.12□□□□□ -1.11
PTPRR-210ENST00000550661 SPATA31A6Q5VVP1 1343 aa8.11□□□□□ -1.11
PTPRR-210ENST00000550661 DDX11L8A8MPP1 907 aa8.11□□□□□ -1.11
PTPRR-210ENST00000550661 SLC10A3P09131 477 aa8.11□□□□□ -1.11
PTPRR-210ENST00000550661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms