RNA–Protein interactions for RNA: ENST00000550483.5

CACNB3-217, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 730 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-217ENST00000550483 FRAT1Q92837 279 aaPredicted RBP16.07■□□□□ 0.16
CACNB3-217ENST00000550483 PKD1L3Q7Z443 1732 aa16.07■□□□□ 0.16
CACNB3-217ENST00000550483 EVA1CP58658 441 aa16.06■□□□□ 0.16
CACNB3-217ENST00000550483 ATF7IPQ6VMQ6 1270 aa16.06■□□□□ 0.16
CACNB3-217ENST00000550483 DZIP1LQ8IYY4 767 aaKnown RBP16.06■□□□□ 0.16
CACNB3-217ENST00000550483 MEGF6O75095 1541 aa16.05■□□□□ 0.16
CACNB3-217ENST00000550483 RNMTO43148 476 aaKnown RBP16.05■□□□□ 0.16
CACNB3-217ENST00000550483 PCDH11XQ9BZA7 1347 aa16.04■□□□□ 0.16
CACNB3-217ENST00000550483 PCDH11YQ9BZA8 1340 aa16.04■□□□□ 0.16
CACNB3-217ENST00000550483 UNC5CLQ8IV45 518 aa16.04■□□□□ 0.16
CACNB3-217ENST00000550483 SEPT12Q8IYM1 358 aa16.04■□□□□ 0.16
CACNB3-217ENST00000550483 MRPL50Q8N5N7 158 aaKnown RBP16.04■□□□□ 0.16
CACNB3-217ENST00000550483 C8orf58Q8NAV2 365 aa16.04■□□□□ 0.16
CACNB3-217ENST00000550483 API5Q9BZZ5 524 aaKnown RBP16.04■□□□□ 0.16
CACNB3-217ENST00000550483 PTPRCP08575 1304 aa16.03■□□□□ 0.16
CACNB3-217ENST00000550483 IL2RBP14784 551 aa16.03■□□□□ 0.16
CACNB3-217ENST00000550483 PHKG2P15735 406 aa16.03■□□□□ 0.16
CACNB3-217ENST00000550483 SF3B2Q13435 895 aaKnown RBP16.03■□□□□ 0.16
CACNB3-217ENST00000550483 C20orf194Q5TEA3 1177 aa16.03■□□□□ 0.16
CACNB3-217ENST00000550483 B4GALNT3Q6L9W6 998 aa16.03■□□□□ 0.16
CACNB3-217ENST00000550483 DCAF5Q96JK2 942 aa16.03■□□□□ 0.16
CACNB3-217ENST00000550483 DDX19BQ9UMR2 479 aa16.03■□□□□ 0.16
CACNB3-217ENST00000550483 MVPQ14764 893 aaKnown RBP16.02■□□□□ 0.16
CACNB3-217ENST00000550483 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
CACNB3-217ENST00000550483 BCL2L13Q9BXK5 485 aa16.02■□□□□ 0.16
CACNB3-217ENST00000550483 NOB1Q9ULX3 412 aaKnown RBP16.02■□□□□ 0.16
CACNB3-217ENST00000550483 MRC1P22897 1456 aa16.02■□□□□ 0.15
CACNB3-217ENST00000550483 TRIM27P14373 513 aa16.01■□□□□ 0.15
CACNB3-217ENST00000550483 CCDC30Q5VVM6 783 aa16.01■□□□□ 0.15
CACNB3-217ENST00000550483 CDCA7Q9BWT1 371 aaPredicted RBP16.01■□□□□ 0.15
CACNB3-217ENST00000550483 STK31Q9BXU1 1019 aa16.01■□□□□ 0.15
CACNB3-217ENST00000550483 KDM3BQ7LBC6 1761 aa16■□□□□ 0.15
CACNB3-217ENST00000550483 CLUAP1Q96AJ1 413 aa16■□□□□ 0.15
CACNB3-217ENST00000550483 PLCH1Q4KWH8 1693 aa15.99■□□□□ 0.15
CACNB3-217ENST00000550483 BTBD11A6QL63 1104 aa15.99■□□□□ 0.15
CACNB3-217ENST00000550483 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
CACNB3-217ENST00000550483 CENPQQ7L2Z9 268 aaPredicted RBP15.99■□□□□ 0.15
CACNB3-217ENST00000550483 ZCRB1Q8TBF4 217 aaKnown RBP15.99■□□□□ 0.15
CACNB3-217ENST00000550483 BTG4Q9NY30 223 aa15.99■□□□□ 0.15
CACNB3-217ENST00000550483 GLI3P10071 1580 aa15.99■□□□□ 0.15
CACNB3-217ENST00000550483 BRWD3Q6RI45 1802 aa15.98■□□□□ 0.15
CACNB3-217ENST00000550483 ELL2O00472 640 aaPredicted RBP15.98■□□□□ 0.15
CACNB3-217ENST00000550483 PANK1Q8TE04 598 aa15.98■□□□□ 0.15
CACNB3-217ENST00000550483 LGR6Q9HBX8 967 aa15.98■□□□□ 0.15
CACNB3-217ENST00000550483 STRN4Q9NRL3 753 aa15.98■□□□□ 0.15
CACNB3-217ENST00000550483 COG6Q9Y2V7 657 aa15.98■□□□□ 0.15
CACNB3-217ENST00000550483 THRAP3Q9Y2W1 955 aaKnown RBP15.98■□□□□ 0.15
CACNB3-217ENST00000550483 ABCC4O15439 1325 aa15.97■□□□□ 0.15
CACNB3-217ENST00000550483 EIF4A1P60842 406 aaKnown RBP15.97■□□□□ 0.15
CACNB3-217ENST00000550483 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
CACNB3-217ENST00000550483 LARP1Q6PKG0 1096 aaKnown RBP15.97■□□□□ 0.15
CACNB3-217ENST00000550483 KRT27Q7Z3Y8 459 aa15.97■□□□□ 0.15
CACNB3-217ENST00000550483 SLC52A2Q9HAB3 445 aa15.97■□□□□ 0.15
CACNB3-217ENST00000550483 SCN11AQ9UI33 1791 aa15.97■□□□□ 0.15
CACNB3-217ENST00000550483 NWD2Q9ULI1 1742 aa15.97■□□□□ 0.15
CACNB3-217ENST00000550483 KDM6AO15550 1401 aaPredicted RBP15.96■□□□□ 0.15
CACNB3-217ENST00000550483 SIPA1L3O60292 1781 aaPredicted RBP15.96■□□□□ 0.15
CACNB3-217ENST00000550483 CCDC9Q9Y3X0 531 aaKnown RBP15.96■□□□□ 0.15
CACNB3-217ENST00000550483 DISP2A7MBM2 1401 aa15.95■□□□□ 0.14
CACNB3-217ENST00000550483 ERVV-2B6SEH9 535 aa15.95■□□□□ 0.14
CACNB3-217ENST00000550483 CYP27B1O15528 508 aa15.95■□□□□ 0.14
CACNB3-217ENST00000550483 EN1Q05925 392 aaPredicted RBP15.95■□□□□ 0.14
CACNB3-217ENST00000550483 R3HDM1Q15032 1099 aaKnown RBP15.95■□□□□ 0.14
CACNB3-217ENST00000550483 MIS18AQ9NYP9 233 aa15.95■□□□□ 0.14
CACNB3-217ENST00000550483 SLIT2O94813 1529 aa15.94■□□□□ 0.14
CACNB3-217ENST00000550483 LRP5O75197 1615 aa15.94■□□□□ 0.14
CACNB3-217ENST00000550483 ONECUT3O60422 494 aaPredicted RBP15.94■□□□□ 0.14
CACNB3-217ENST00000550483 RLBP1P12271 317 aa15.94■□□□□ 0.14
CACNB3-217ENST00000550483 FAM182BQ5T319 152 aa15.94■□□□□ 0.14
CACNB3-217ENST00000550483 ITPRIPQ8IWB1 547 aa15.94■□□□□ 0.14
CACNB3-217ENST00000550483 HEG1Q9ULI3 1381 aa15.94■□□□□ 0.14
CACNB3-217ENST00000550483 SLC4A2P04920 1241 aa15.93■□□□□ 0.14
CACNB3-217ENST00000550483 VPS72Q15906 364 aa15.93■□□□□ 0.14
CACNB3-217ENST00000550483 NRAPQ86VF7 1730 aa15.93■□□□□ 0.14
CACNB3-217ENST00000550483 BAG6P46379 1132 aa15.92■□□□□ 0.14
CACNB3-217ENST00000550483 CABP4P57796 275 aa15.92■□□□□ 0.14
CACNB3-217ENST00000550483 KRT24Q2M2I5 525 aa15.92■□□□□ 0.14
CACNB3-217ENST00000550483 HDGFL1Q5TGJ6 251 aa15.92■□□□□ 0.14
CACNB3-217ENST00000550483 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
CACNB3-217ENST00000550483 TMEM57Q8N5G2 664 aa15.92■□□□□ 0.14
CACNB3-217ENST00000550483 KDM2BQ8NHM5 1336 aa15.92■□□□□ 0.14
CACNB3-217ENST00000550483 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
CACNB3-217ENST00000550483 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
CACNB3-217ENST00000550483 A0A0G2JS52 829 aa15.91■□□□□ 0.14
CACNB3-217ENST00000550483 MYT1Q01538 1121 aa15.91■□□□□ 0.14
CACNB3-217ENST00000550483 INTS3Q68E01 1043 aaKnown RBP15.91■□□□□ 0.14
CACNB3-217ENST00000550483 ZNF790Q6PG37 636 aa15.91■□□□□ 0.14
CACNB3-217ENST00000550483 RWDD1Q9H446 243 aaPredicted RBP15.91■□□□□ 0.14
CACNB3-217ENST00000550483 VIRMAQ69YN4 1812 aaKnown RBP15.91■□□□□ 0.14
CACNB3-217ENST00000550483 CCT4P50991 539 aaKnown RBP15.9■□□□□ 0.14
CACNB3-217ENST00000550483 TNS2Q63HR2 1409 aa15.89■□□□□ 0.13
CACNB3-217ENST00000550483 GIGYF1O75420 1035 aaPredicted RBP15.89■□□□□ 0.13
CACNB3-217ENST00000550483 FAM98CQ17RN3 349 aaKnown RBP15.89■□□□□ 0.13
CACNB3-217ENST00000550483 BARGINQ6ZT62 677 aa15.89■□□□□ 0.13
CACNB3-217ENST00000550483 FMNL2Q96PY5 1086 aa15.89■□□□□ 0.13
CACNB3-217ENST00000550483 ZBTB40Q9NUA8 1239 aa15.89■□□□□ 0.13
CACNB3-217ENST00000550483 DBF4Q9UBU7 674 aaPredicted RBP15.89■□□□□ 0.13
CACNB3-217ENST00000550483 SPATA31A1Q5TZJ5 1347 aa15.89■□□□□ 0.13
CACNB3-217ENST00000550483 WNK3Q9BYP7 1800 aa15.89■□□□□ 0.13
CACNB3-217ENST00000550483 YY1P25490 414 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms