RNA–Protein interactions for RNA: ENST00000550380.5

LINC02407-201, Transcript of long intergenic non-protein coding RNA 2407, humanhuman

TSL 4

Gene LINC02407, Length 543 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02407-201ENST00000550380 ATRNO75882 1429 aa16.03■□□□□ 0.16
LINC02407-201ENST00000550380 SENP3-EIF4A1A0A087X0R7 540 aa16.03■□□□□ 0.16
LINC02407-201ENST00000550380 DCTN1Q14203 1278 aa16.03■□□□□ 0.16
LINC02407-201ENST00000550380 PDE3AQ14432 1141 aa16.03■□□□□ 0.16
LINC02407-201ENST00000550380 TWISTNBQ3B726 338 aaPredicted RBP16.03■□□□□ 0.16
LINC02407-201ENST00000550380 TSR2Q969E8 191 aaKnown RBP16.03■□□□□ 0.16
LINC02407-201ENST00000550380 THUMPD2Q9BTF0 503 aaKnown RBP16.03■□□□□ 0.16
LINC02407-201ENST00000550380 TRPC5Q9UL62 973 aaPredicted RBP16.03■□□□□ 0.16
LINC02407-201ENST00000550380 PAPPAQ13219 1627 aa16.03■□□□□ 0.16
LINC02407-201ENST00000550380 BCL9O00512 1426 aa16.02■□□□□ 0.16
LINC02407-201ENST00000550380 IPO8O15397 1037 aaKnown RBP16.02■□□□□ 0.16
LINC02407-201ENST00000550380 MPRIPQ6WCQ1 1025 aa16.02■□□□□ 0.16
LINC02407-201ENST00000550380 ARHGAP45Q92619 1136 aa16.02■□□□□ 0.16
LINC02407-201ENST00000550380 HEG1Q9ULI3 1381 aa16.01■□□□□ 0.15
LINC02407-201ENST00000550380 UBR2Q8IWV8 1755 aa16.01■□□□□ 0.15
LINC02407-201ENST00000550380 BTBD11A6QL63 1104 aa16.01■□□□□ 0.15
LINC02407-201ENST00000550380 VAMP4O75379 141 aa16.01■□□□□ 0.15
LINC02407-201ENST00000550380 DDB1Q16531 1140 aa16.01■□□□□ 0.15
LINC02407-201ENST00000550380 LAS1LQ9Y4W2 734 aaKnown RBP16.01■□□□□ 0.15
LINC02407-201ENST00000550380 ONECUT3O60422 494 aaPredicted RBP16■□□□□ 0.15
LINC02407-201ENST00000550380 ZNF772Q68DY9 489 aaPredicted RBP15.99■□□□□ 0.15
LINC02407-201ENST00000550380 LGR6Q9HBX8 967 aa15.99■□□□□ 0.15
LINC02407-201ENST00000550380 USP35Q9P2H5 1018 aa15.99■□□□□ 0.15
LINC02407-201ENST00000550380 CABP4P57796 275 aa15.98■□□□□ 0.15
LINC02407-201ENST00000550380 GJD4Q96KN9 370 aaPredicted RBP15.98■□□□□ 0.15
LINC02407-201ENST00000550380 CHMP4BQ9H444 224 aaKnown RBP15.98■□□□□ 0.15
LINC02407-201ENST00000550380 ITGB4P16144 1822 aa15.98■□□□□ 0.15
LINC02407-201ENST00000550380 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
LINC02407-201ENST00000550380 PTPRCP08575 1304 aa15.97■□□□□ 0.15
LINC02407-201ENST00000550380 AFF2P51816 1311 aa15.97■□□□□ 0.15
LINC02407-201ENST00000550380 TOGARAM1Q9Y4F4 1720 aa15.97■□□□□ 0.15
LINC02407-201ENST00000550380 GLI3P10071 1580 aa15.97■□□□□ 0.15
LINC02407-201ENST00000550380 CCDC30Q5VVM6 783 aa15.97■□□□□ 0.15
LINC02407-201ENST00000550380 ZNF790Q6PG37 636 aa15.97■□□□□ 0.15
LINC02407-201ENST00000550380 TTC5Q8N0Z6 440 aa15.97■□□□□ 0.15
LINC02407-201ENST00000550380 SMC4Q9NTJ3 1288 aa15.97■□□□□ 0.15
LINC02407-201ENST00000550380 CCDC9Q9Y3X0 531 aaKnown RBP15.97■□□□□ 0.15
LINC02407-201ENST00000550380 CICQ96RK0 1608 aaPredicted RBP15.97■□□□□ 0.15
LINC02407-201ENST00000550380 ZNF831Q5JPB2 1677 aa15.96■□□□□ 0.15
LINC02407-201ENST00000550380 EIF4A1P60842 406 aaKnown RBP15.96■□□□□ 0.15
LINC02407-201ENST00000550380 ZKSCAN2Q63HK3 967 aa15.96■□□□□ 0.15
LINC02407-201ENST00000550380 GTF3C3Q9Y5Q9 886 aa15.96■□□□□ 0.15
LINC02407-201ENST00000550380 C8orf58Q8NAV2 365 aa15.95■□□□□ 0.14
LINC02407-201ENST00000550380 NFATC2IPQ8NCF5 419 aa15.95■□□□□ 0.14
LINC02407-201ENST00000550380 SSH1Q8WYL5 1049 aa15.95■□□□□ 0.14
LINC02407-201ENST00000550380 STK31Q9BXU1 1019 aa15.95■□□□□ 0.14
LINC02407-201ENST00000550380 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
LINC02407-201ENST00000550380 HMGB2P26583 209 aaKnown RBP15.94■□□□□ 0.14
LINC02407-201ENST00000550380 CANXP27824 592 aaKnown RBP15.94■□□□□ 0.14
LINC02407-201ENST00000550380 VSIG10Q8N0Z9 540 aa15.94■□□□□ 0.14
LINC02407-201ENST00000550380 DDX54Q8TDD1 881 aaKnown RBP15.94■□□□□ 0.14
LINC02407-201ENST00000550380 FMNL2Q96PY5 1086 aa15.94■□□□□ 0.14
LINC02407-201ENST00000550380 TEX13AQ9BXU3 409 aaPredicted RBP15.94■□□□□ 0.14
LINC02407-201ENST00000550380 TMOD3Q9NYL9 352 aa15.94■□□□□ 0.14
LINC02407-201ENST00000550380 DOT1LQ8TEK3 1739 aa15.94■□□□□ 0.14
LINC02407-201ENST00000550380 API5Q9BZZ5 524 aaKnown RBP15.93■□□□□ 0.14
LINC02407-201ENST00000550380 ATF7IPQ6VMQ6 1270 aa15.92■□□□□ 0.14
LINC02407-201ENST00000550380 N4BP2Q86UW6 1770 aaPredicted RBP15.92■□□□□ 0.14
LINC02407-201ENST00000550380 IBTKQ9P2D0 1353 aaPredicted RBP15.91■□□□□ 0.14
LINC02407-201ENST00000550380 GIGYF1O75420 1035 aaPredicted RBP15.91■□□□□ 0.14
LINC02407-201ENST00000550380 BCAR3O75815 825 aa15.91■□□□□ 0.14
LINC02407-201ENST00000550380 SNRPA1P09661 255 aaKnown RBP15.91■□□□□ 0.14
LINC02407-201ENST00000550380 MRPL50Q8N5N7 158 aaKnown RBP15.91■□□□□ 0.14
LINC02407-201ENST00000550380 TSPYL6Q8N831 410 aa15.91■□□□□ 0.14
LINC02407-201ENST00000550380 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
LINC02407-201ENST00000550380 KCPQ6ZWJ8 1503 aa15.9■□□□□ 0.14
LINC02407-201ENST00000550380 NHSQ6T4R5 1651 aa15.9■□□□□ 0.14
LINC02407-201ENST00000550380 FKBP8Q14318 412 aa15.9■□□□□ 0.14
LINC02407-201ENST00000550380 DBF4Q9UBU7 674 aaPredicted RBP15.9■□□□□ 0.14
LINC02407-201ENST00000550380 RBM6P78332 1123 aaKnown RBP15.89■□□□□ 0.13
LINC02407-201ENST00000550380 FAM98CQ17RN3 349 aaKnown RBP15.89■□□□□ 0.13
LINC02407-201ENST00000550380 HDGFL1Q5TGJ6 251 aa15.89■□□□□ 0.13
LINC02407-201ENST00000550380 FTSJ3Q8IY81 847 aaKnown RBP15.89■□□□□ 0.13
LINC02407-201ENST00000550380 MIS18AQ9NYP9 233 aa15.89■□□□□ 0.13
LINC02407-201ENST00000550380 DZIP1LQ8IYY4 767 aaKnown RBP15.88■□□□□ 0.13
LINC02407-201ENST00000550380 SMARCC1Q92922 1105 aaPredicted RBP15.88■□□□□ 0.13
LINC02407-201ENST00000550380 QTRT2Q9H974 415 aaKnown RBP15.88■□□□□ 0.13
LINC02407-201ENST00000550380 MARCH10Q8NA82 808 aaPredicted RBP15.87■□□□□ 0.13
LINC02407-201ENST00000550380 HYPKQ9NX55 129 aa15.87■□□□□ 0.13
LINC02407-201ENST00000550380 PPP4R2Q9NY27 417 aa15.87■□□□□ 0.13
LINC02407-201ENST00000550380 DDX19BQ9UMR2 479 aa15.87■□□□□ 0.13
LINC02407-201ENST00000550380 C5P01031 1676 aa15.86■□□□□ 0.13
LINC02407-201ENST00000550380 TRIM27P14373 513 aa15.86■□□□□ 0.13
LINC02407-201ENST00000550380 NOB1Q9ULX3 412 aaKnown RBP15.86■□□□□ 0.13
LINC02407-201ENST00000550380 ABCC4O15439 1325 aa15.86■□□□□ 0.13
LINC02407-201ENST00000550380 ELL2O00472 640 aaPredicted RBP15.85■□□□□ 0.13
LINC02407-201ENST00000550380 SLC4A2P04920 1241 aa15.85■□□□□ 0.13
LINC02407-201ENST00000550380 FRAT1Q92837 279 aaPredicted RBP15.85■□□□□ 0.13
LINC02407-201ENST00000550380 ZNF496Q96IT1 587 aaPredicted RBP15.85■□□□□ 0.13
LINC02407-201ENST00000550380 DDX21Q9NR30 783 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC02407-201ENST00000550380 SBF2Q86WG5 1849 aa15.84■□□□□ 0.13
LINC02407-201ENST00000550380 KAT6BQ8WYB5 2073 aa15.84■□□□□ 0.13
LINC02407-201ENST00000550380 MVPQ14764 893 aaKnown RBP15.84■□□□□ 0.13
LINC02407-201ENST00000550380 PIGBQ92521 554 aa15.84■□□□□ 0.13
LINC02407-201ENST00000550380 STARD3NLO95772 234 aa15.82■□□□□ 0.12
LINC02407-201ENST00000550380 DDX58O95786 925 aaKnown RBP15.82■□□□□ 0.12
LINC02407-201ENST00000550380 CCT4P50991 539 aaKnown RBP15.82■□□□□ 0.12
LINC02407-201ENST00000550380 FLIIQ13045 1269 aa15.82■□□□□ 0.12
LINC02407-201ENST00000550380 KRT24Q2M2I5 525 aa15.82■□□□□ 0.12
LINC02407-201ENST00000550380 INTS3Q68E01 1043 aaKnown RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms