RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 SCNN1DP51172 638 aa9.26□□□□□ -0.93
HCFC2-204ENST00000550335 MYT1Q01538 1121 aa9.26□□□□□ -0.93
HCFC2-204ENST00000550335 PPP1R18Q6NYC8 613 aa9.26□□□□□ -0.93
HCFC2-204ENST00000550335 NPAS4Q8IUM7 802 aa9.26□□□□□ -0.93
HCFC2-204ENST00000550335 ZSCAN29Q8IWY8 852 aaPredicted RBP9.26□□□□□ -0.93
HCFC2-204ENST00000550335 TMC1Q8TDI8 760 aa9.26□□□□□ -0.93
HCFC2-204ENST00000550335 ETNK1Q9HBU6 452 aa9.26□□□□□ -0.93
HCFC2-204ENST00000550335 RAB6BQ9NRW1 208 aa9.26□□□□□ -0.93
HCFC2-204ENST00000550335 FOXO3O43524 673 aa9.25□□□□□ -0.93
HCFC2-204ENST00000550335 GRM5P41594 1212 aa9.25□□□□□ -0.93
HCFC2-204ENST00000550335 RPIAP49247 311 aa9.25□□□□□ -0.93
HCFC2-204ENST00000550335 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.25□□□□□ -0.93
HCFC2-204ENST00000550335 KIAA1522Q9P206 1035 aaPredicted RBP9.25□□□□□ -0.93
HCFC2-204ENST00000550335 IGSF3O75054 1194 aa9.24□□□□□ -0.93
HCFC2-204ENST00000550335 TAGLNQ01995 201 aaKnown RBP9.24□□□□□ -0.93
HCFC2-204ENST00000550335 PPP1R26Q5T8A7 1209 aaPredicted RBP9.24□□□□□ -0.93
HCFC2-204ENST00000550335 CYP2U1Q7Z449 544 aa9.24□□□□□ -0.93
HCFC2-204ENST00000550335 CCDC116Q8IYX3 515 aa9.24□□□□□ -0.93
HCFC2-204ENST00000550335 HELQQ8TDG4 1101 aa9.24□□□□□ -0.93
HCFC2-204ENST00000550335 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.24□□□□□ -0.93
HCFC2-204ENST00000550335 FAM13AO94988 1023 aa9.23□□□□□ -0.93
HCFC2-204ENST00000550335 ARHGAP4P98171 946 aa9.23□□□□□ -0.93
HCFC2-204ENST00000550335 CDK15Q96Q40 435 aa9.23□□□□□ -0.93
HCFC2-204ENST00000550335 HCSTQ9UBK5 93 aa9.23□□□□□ -0.93
HCFC2-204ENST00000550335 A0A1W2PRU2 124 aa9.22□□□□□ -0.93
HCFC2-204ENST00000550335 MPSTP25325 297 aa9.22□□□□□ -0.93
HCFC2-204ENST00000550335 ECM1Q16610 540 aa9.22□□□□□ -0.93
HCFC2-204ENST00000550335 ESCO1Q5FWF5 840 aa9.22□□□□□ -0.93
HCFC2-204ENST00000550335 SLC9A9Q8IVB4 645 aa9.22□□□□□ -0.93
HCFC2-204ENST00000550335 ASB16Q96NS5 453 aa9.22□□□□□ -0.93
HCFC2-204ENST00000550335 SAP130Q9H0E3 1048 aa9.22□□□□□ -0.93
HCFC2-204ENST00000550335 USP35Q9P2H5 1018 aa9.22□□□□□ -0.93
HCFC2-204ENST00000550335 GNRH1P01148 92 aa9.21□□□□□ -0.94
HCFC2-204ENST00000550335 ADD1P35611 737 aaKnown RBP9.21□□□□□ -0.94
HCFC2-204ENST00000550335 C16orf46Q6P387 395 aa9.21□□□□□ -0.94
HCFC2-204ENST00000550335 COL26A1Q96A83 441 aa9.21□□□□□ -0.94
HCFC2-204ENST00000550335 NGLY1Q96IV0 654 aa9.21□□□□□ -0.94
HCFC2-204ENST00000550335 ARHGEF10LQ9HCE6 1279 aa9.21□□□□□ -0.94
HCFC2-204ENST00000550335 CHMP3Q9Y3E7 222 aa9.21□□□□□ -0.94
HCFC2-204ENST00000550335 ADH1CP00326 375 aa9.2□□□□□ -0.94
HCFC2-204ENST00000550335 EAPPQ56P03 285 aaPredicted RBP9.2□□□□□ -0.94
HCFC2-204ENST00000550335 LIAT1Q6ZQX7 453 aa9.2□□□□□ -0.94
HCFC2-204ENST00000550335 PGPEP1Q9NXJ5 209 aa9.2□□□□□ -0.94
HCFC2-204ENST00000550335 BRPF3Q9ULD4 1205 aa9.2□□□□□ -0.94
HCFC2-204ENST00000550335 A6NJY4 79 aa9.19□□□□□ -0.94
HCFC2-204ENST00000550335 LILRA1O75019 489 aa9.19□□□□□ -0.94
HCFC2-204ENST00000550335 ITGBL1O95965 494 aaPredicted RBP9.19□□□□□ -0.94
HCFC2-204ENST00000550335 SMTNP53814 917 aa9.19□□□□□ -0.94
HCFC2-204ENST00000550335 NR5A1Q13285 461 aa9.19□□□□□ -0.94
HCFC2-204ENST00000550335 BCL11AQ9H165 835 aa9.19□□□□□ -0.94
HCFC2-204ENST00000550335 WASLO00401 505 aaPredicted RBP9.18□□□□□ -0.94
HCFC2-204ENST00000550335 NDUFB5O43674 189 aa9.18□□□□□ -0.94
HCFC2-204ENST00000550335 EPHA4P54764 986 aa9.18□□□□□ -0.94
HCFC2-204ENST00000550335 MRGPRX2Q96LB1 330 aa9.18□□□□□ -0.94
HCFC2-204ENST00000550335 SLC4A9Q96Q91 983 aa9.18□□□□□ -0.94
HCFC2-204ENST00000550335 SIAH2O43255 324 aa9.17□□□□□ -0.94
HCFC2-204ENST00000550335 NR3C2P08235 984 aa9.17□□□□□ -0.94
HCFC2-204ENST00000550335 TLR1Q15399 786 aa9.17□□□□□ -0.94
HCFC2-204ENST00000550335 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
HCFC2-204ENST00000550335 SCHIP1Q9P0W5 487 aaPredicted RBP9.17□□□□□ -0.94
HCFC2-204ENST00000550335 ZNF232Q9UNY5 417 aa9.17□□□□□ -0.94
HCFC2-204ENST00000550335 ALDH1A1P00352 501 aa9.16□□□□□ -0.94
HCFC2-204ENST00000550335 COX20Q5RI15 118 aa9.16□□□□□ -0.94
HCFC2-204ENST00000550335 TMC7Q7Z402 723 aa9.16□□□□□ -0.94
HCFC2-204ENST00000550335 FBXO33Q7Z6M2 555 aa9.16□□□□□ -0.94
HCFC2-204ENST00000550335 RGL4Q8IZJ4 473 aa9.16□□□□□ -0.94
HCFC2-204ENST00000550335 CNKSR1Q969H4 720 aa9.16□□□□□ -0.94
HCFC2-204ENST00000550335 CCDC87Q9NVE4 849 aa9.16□□□□□ -0.94
HCFC2-204ENST00000550335 HCN4Q9Y3Q4 1203 aa9.16□□□□□ -0.94
HCFC2-204ENST00000550335 EMILIN1Q9Y6C2 1016 aa9.16□□□□□ -0.94
HCFC2-204ENST00000550335 IL2RAP01589 272 aa9.15□□□□□ -0.94
HCFC2-204ENST00000550335 SLC19A1P41440 591 aa9.15□□□□□ -0.94
HCFC2-204ENST00000550335 MAPK8P45983 427 aa9.15□□□□□ -0.94
HCFC2-204ENST00000550335 EIF1AXP47813 144 aaKnown RBP9.15□□□□□ -0.94
HCFC2-204ENST00000550335 PSMA6P60900 246 aaKnown RBP9.15□□□□□ -0.94
HCFC2-204ENST00000550335 RNF166Q96A37 237 aaPredicted RBP9.15□□□□□ -0.94
HCFC2-204ENST00000550335 C2orf49Q9BVC5 232 aaPredicted RBP9.15□□□□□ -0.94
HCFC2-204ENST00000550335 CABP1Q9NZU7 370 aa9.15□□□□□ -0.94
HCFC2-204ENST00000550335 STIM2Q9P246 746 aa9.15□□□□□ -0.94
HCFC2-204ENST00000550335 WASF2Q9Y6W5 498 aa9.15□□□□□ -0.94
HCFC2-204ENST00000550335 MEN1O00255 615 aa9.14□□□□□ -0.95
HCFC2-204ENST00000550335 FOXK2Q01167 660 aa9.14□□□□□ -0.95
HCFC2-204ENST00000550335 FOXC1Q12948 553 aa9.14□□□□□ -0.95
HCFC2-204ENST00000550335 CBLBQ13191 982 aa9.14□□□□□ -0.95
HCFC2-204ENST00000550335 TSNAXIP1Q2TAA8 658 aa9.14□□□□□ -0.95
HCFC2-204ENST00000550335 ALKBH2Q6NS38 261 aa9.14□□□□□ -0.95
HCFC2-204ENST00000550335 MPNDQ8N594 471 aa9.14□□□□□ -0.95
HCFC2-204ENST00000550335 XAGE2Q96GT9 111 aa9.14□□□□□ -0.95
HCFC2-204ENST00000550335 PARP3Q9Y6F1 533 aa9.14□□□□□ -0.95
HCFC2-204ENST00000550335 USP3Q9Y6I4 520 aa9.14□□□□□ -0.95
HCFC2-204ENST00000550335 LOC105371045A0A1W2PR82 267 aa9.13□□□□□ -0.95
HCFC2-204ENST00000550335 SERTM1A2A2V5 107 aa9.13□□□□□ -0.95
HCFC2-204ENST00000550335 WNT7AO00755 349 aa9.13□□□□□ -0.95
HCFC2-204ENST00000550335 TCF3P15923 654 aa9.13□□□□□ -0.95
HCFC2-204ENST00000550335 NPR3P17342 541 aa9.13□□□□□ -0.95
HCFC2-204ENST00000550335 PLCB3Q01970 1234 aa9.13□□□□□ -0.95
HCFC2-204ENST00000550335 NLRP3Q96P20 1036 aa9.13□□□□□ -0.95
HCFC2-204ENST00000550335 CDK2AP1O14519 115 aa9.12□□□□□ -0.95
HCFC2-204ENST00000550335 P4HBP07237 508 aaKnown RBP9.12□□□□□ -0.95
HCFC2-204ENST00000550335 NNTQ13423 1086 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms