RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ERVV-2B6SEH9 535 aa15□□□□□ -0.01
RAB5B-208ENST00000550283 ITPK1Q13572 414 aa15□□□□□ -0.01
RAB5B-208ENST00000550283 AKT1S1Q96B36 256 aa15□□□□□ -0.01
RAB5B-208ENST00000550283 CCNL1Q9UK58 526 aaPredicted RBP15□□□□□ -0.01
RAB5B-208ENST00000550283 VIRMAQ69YN4 1812 aaKnown RBP14.99□□□□□ -0.01
RAB5B-208ENST00000550283 TUBGCP6Q96RT7 1819 aa14.99□□□□□ -0.01
RAB5B-208ENST00000550283 CASZ1Q86V15 1759 aa14.99□□□□□ -0.01
RAB5B-208ENST00000550283 FCHSD2O94868 740 aa14.99□□□□□ -0.01
RAB5B-208ENST00000550283 YY1P25490 414 aa14.99□□□□□ -0.01
RAB5B-208ENST00000550283 CABP4P57796 275 aa14.99□□□□□ -0.01
RAB5B-208ENST00000550283 DCTN1Q14203 1278 aa14.99□□□□□ -0.01
RAB5B-208ENST00000550283 MAP3K5Q99683 1374 aa14.98□□□□□ -0.01
RAB5B-208ENST00000550283 HSP90AB1P08238 724 aaKnown RBP14.98□□□□□ -0.01
RAB5B-208ENST00000550283 SLC39A6Q13433 755 aa14.98□□□□□ -0.01
RAB5B-208ENST00000550283 SLC15A2Q16348 729 aa14.98□□□□□ -0.01
RAB5B-208ENST00000550283 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
RAB5B-208ENST00000550283 SLC27A3Q5K4L6 730 aa14.97□□□□□ -0.01
RAB5B-208ENST00000550283 CCDC146Q8IYE0 955 aa14.97□□□□□ -0.01
RAB5B-208ENST00000550283 LINC00116Q8NCU8 138 aa14.97□□□□□ -0.01
RAB5B-208ENST00000550283 SLC52A2Q9HAB3 445 aa14.97□□□□□ -0.01
RAB5B-208ENST00000550283 C5P01031 1676 aa14.97□□□□□ -0.01
RAB5B-208ENST00000550283 TAF1LQ8IZX4 1826 aa14.96□□□□□ -0.01
RAB5B-208ENST00000550283 LOC102724428A0A0B4J2F2 783 aa14.96□□□□□ -0.01
RAB5B-208ENST00000550283 GNAT3A8MTJ3 354 aa14.96□□□□□ -0.01
RAB5B-208ENST00000550283 SIK1P57059 783 aa14.96□□□□□ -0.01
RAB5B-208ENST00000550283 NBPF14Q5TI25 921 aa14.96□□□□□ -0.01
RAB5B-208ENST00000550283 MCM10Q7L590 875 aa14.96□□□□□ -0.01
RAB5B-208ENST00000550283 ADAMTS8Q9UP79 889 aa14.96□□□□□ -0.01
RAB5B-208ENST00000550283 CEMIPQ8WUJ3 1361 aa14.96□□□□□ -0.02
RAB5B-208ENST00000550283 KCNQ3O43525 872 aa14.95□□□□□ -0.02
RAB5B-208ENST00000550283 GAS2L2Q8NHY3 880 aa14.95□□□□□ -0.02
RAB5B-208ENST00000550283 THUMPD2Q9BTF0 503 aaKnown RBP14.95□□□□□ -0.02
RAB5B-208ENST00000550283 STK32BQ9NY57 414 aa14.95□□□□□ -0.02
RAB5B-208ENST00000550283 KCPQ6ZWJ8 1503 aa14.95□□□□□ -0.02
RAB5B-208ENST00000550283 SIPA1L3O60292 1781 aaPredicted RBP14.95□□□□□ -0.02
RAB5B-208ENST00000550283 PNPLA7Q6ZV29 1317 aa14.94□□□□□ -0.02
RAB5B-208ENST00000550283 PTCD1O75127 700 aaKnown RBP14.94□□□□□ -0.02
RAB5B-208ENST00000550283 SMARCC1Q92922 1105 aaPredicted RBP14.94□□□□□ -0.02
RAB5B-208ENST00000550283 C4BP0C0L5 1744 aa14.94□□□□□ -0.02
RAB5B-208ENST00000550283 DLG5Q8TDM6 1919 aa14.94□□□□□ -0.02
RAB5B-208ENST00000550283 TJP1Q07157 1748 aa14.93□□□□□ -0.02
RAB5B-208ENST00000550283 SENP3-EIF4A1A0A087X0R7 540 aa14.93□□□□□ -0.02
RAB5B-208ENST00000550283 ZBTB7AO95365 584 aa14.93□□□□□ -0.02
RAB5B-208ENST00000550283 RBM42Q9BTD8 480 aaKnown RBP14.93□□□□□ -0.02
RAB5B-208ENST00000550283 RRP7AQ9Y3A4 280 aaKnown RBP14.93□□□□□ -0.02
RAB5B-208ENST00000550283 ATP6V1AP38606 617 aa14.92□□□□□ -0.02
RAB5B-208ENST00000550283 NFE2L2Q16236 605 aa14.91□□□□□ -0.02
RAB5B-208ENST00000550283 COL5A3P25940 1745 aaPredicted RBP14.91□□□□□ -0.02
RAB5B-208ENST00000550283 COL23A1Q86Y22 540 aaPredicted RBP14.9□□□□□ -0.02
RAB5B-208ENST00000550283 MIS18AQ9NYP9 233 aa14.9□□□□□ -0.02
RAB5B-208ENST00000550283 ATF5Q9Y2D1 282 aaPredicted RBP14.9□□□□□ -0.02
RAB5B-208ENST00000550283 UBR2Q8IWV8 1755 aa14.9□□□□□ -0.02
RAB5B-208ENST00000550283 QSER1Q2KHR3 1735 aa14.89□□□□□ -0.03
RAB5B-208ENST00000550283 PTGER2P43116 358 aa14.89□□□□□ -0.03
RAB5B-208ENST00000550283 DNAJC10Q8IXB1 793 aa14.89□□□□□ -0.03
RAB5B-208ENST00000550283 TFCP2L1Q9NZI6 479 aa14.89□□□□□ -0.03
RAB5B-208ENST00000550283 ZNF831Q5JPB2 1677 aa14.89□□□□□ -0.03
RAB5B-208ENST00000550283 MYH14Q7Z406 1995 aaKnown RBP14.89□□□□□ -0.03
RAB5B-208ENST00000550283 UBR3Q6ZT12 1888 aa14.89□□□□□ -0.03
RAB5B-208ENST00000550283 PRAMEF22A3QJZ6 481 aa14.88□□□□□ -0.03
RAB5B-208ENST00000550283 ANP32CO43423 234 aa14.88□□□□□ -0.03
RAB5B-208ENST00000550283 TMPOP42166 694 aaKnown RBP14.88□□□□□ -0.03
RAB5B-208ENST00000550283 ZNF496Q96IT1 587 aaPredicted RBP14.88□□□□□ -0.03
RAB5B-208ENST00000550283 PHF14O94880 888 aa14.87□□□□□ -0.03
RAB5B-208ENST00000550283 TEFQ10587 303 aa14.87□□□□□ -0.03
RAB5B-208ENST00000550283 WDR43Q15061 677 aaKnown RBP eCLIP14.87□□□□□ -0.03
RAB5B-208ENST00000550283 PNISRQ8TF01 805 aaKnown RBP14.87□□□□□ -0.03
RAB5B-208ENST00000550283 SGIP1Q9BQI5 828 aa14.87□□□□□ -0.03
RAB5B-208ENST00000550283 TRIM35Q9UPQ4 493 aa14.87□□□□□ -0.03
RAB5B-208ENST00000550283 CICQ96RK0 1608 aaPredicted RBP14.87□□□□□ -0.03
RAB5B-208ENST00000550283 NEUROD2Q15784 382 aa14.86□□□□□ -0.03
RAB5B-208ENST00000550283 INTS5Q6P9B9 1019 aaKnown RBP14.86□□□□□ -0.03
RAB5B-208ENST00000550283 ZNF790Q6PG37 636 aa14.86□□□□□ -0.03
RAB5B-208ENST00000550283 RUNDC1Q96C34 613 aa14.86□□□□□ -0.03
RAB5B-208ENST00000550283 MAPK8IP3Q9UPT6 1336 aa14.86□□□□□ -0.03
RAB5B-208ENST00000550283 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.85□□□□□ -0.03
RAB5B-208ENST00000550283 GNPATO15228 680 aa14.85□□□□□ -0.03
RAB5B-208ENST00000550283 RIPK4P57078 832 aa14.85□□□□□ -0.03
RAB5B-208ENST00000550283 MSL1Q68DK7 614 aa14.85□□□□□ -0.03
RAB5B-208ENST00000550283 MRS2Q9HD23 443 aa14.85□□□□□ -0.03
RAB5B-208ENST00000550283 BTBD11A6QL63 1104 aa14.84□□□□□ -0.03
RAB5B-208ENST00000550283 HTATSF1O43719 755 aaKnown RBP14.84□□□□□ -0.03
RAB5B-208ENST00000550283 CYP19A1P11511 503 aaPredicted RBP14.84□□□□□ -0.03
RAB5B-208ENST00000550283 CRKLP46109 303 aaKnown RBP14.84□□□□□ -0.03
RAB5B-208ENST00000550283 RTF1Q92541 710 aaKnown RBP14.84□□□□□ -0.03
RAB5B-208ENST00000550283 AK7Q96M32 723 aa14.84□□□□□ -0.03
RAB5B-208ENST00000550283 APAF1O14727 1248 aa14.83□□□□□ -0.04
RAB5B-208ENST00000550283 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
RAB5B-208ENST00000550283 CNTNAP4Q9C0A0 1308 aa14.83□□□□□ -0.04
RAB5B-208ENST00000550283 HEG1Q9ULI3 1381 aa14.83□□□□□ -0.04
RAB5B-208ENST00000550283 COL24A1Q17RW2 1714 aa14.83□□□□□ -0.04
RAB5B-208ENST00000550283 PIP4K2AP48426 406 aaPredicted RBP14.82□□□□□ -0.04
RAB5B-208ENST00000550283 MTFR1LQ9H019 292 aa14.82□□□□□ -0.04
RAB5B-208ENST00000550283 SPON1Q9HCB6 807 aa14.82□□□□□ -0.04
RAB5B-208ENST00000550283 KDM3BQ7LBC6 1761 aa14.82□□□□□ -0.04
RAB5B-208ENST00000550283 TAF7Q15545 349 aaPredicted RBP14.81□□□□□ -0.04
RAB5B-208ENST00000550283 RC3H1Q5TC82 1133 aaKnown RBP14.81□□□□□ -0.04
RAB5B-208ENST00000550283 SRP68Q9UHB9 627 aaKnown RBP14.81□□□□□ -0.04
RAB5B-208ENST00000550283 ZBTB1Q9Y2K1 713 aa14.81□□□□□ -0.04
RAB5B-208ENST00000550283 USP16Q9Y5T5 823 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms