RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 PTGER2P43116 358 aa24.09■■□□□ 1.45
TUBA1A-206ENST00000550254 MTFR1LQ9H019 292 aa24.09■■□□□ 1.45
TUBA1A-206ENST00000550254 ZNF831Q5JPB2 1677 aa24.08■■□□□ 1.45
TUBA1A-206ENST00000550254 RNMTO43148 476 aaKnown RBP24.08■■□□□ 1.45
TUBA1A-206ENST00000550254 ITPK1Q13572 414 aa24.08■■□□□ 1.45
TUBA1A-206ENST00000550254 U2AF1L5P0DN76 240 aaPredicted RBP24.07■■□□□ 1.44
TUBA1A-206ENST00000550254 PRKAR2BP31323 418 aa24.07■■□□□ 1.44
TUBA1A-206ENST00000550254 U2AF1Q01081 240 aaKnown RBP eCLIP24.07■■□□□ 1.44
TUBA1A-206ENST00000550254 LINC00116Q8NCU8 138 aa24.07■■□□□ 1.44
TUBA1A-206ENST00000550254 PHACTR3Q96KR7 559 aa24.07■■□□□ 1.44
TUBA1A-206ENST00000550254 SLC4A9Q96Q91 983 aa24.07■■□□□ 1.44
TUBA1A-206ENST00000550254 SGIP1Q9BQI5 828 aa24.07■■□□□ 1.44
TUBA1A-206ENST00000550254 COL24A1Q17RW2 1714 aa24.07■■□□□ 1.44
TUBA1A-206ENST00000550254 MRC1P22897 1456 aa24.07■■□□□ 1.44
TUBA1A-206ENST00000550254 ATP6V1AP38606 617 aa24.06■■□□□ 1.44
TUBA1A-206ENST00000550254 RALBP1Q15311 655 aa24.06■■□□□ 1.44
TUBA1A-206ENST00000550254 UBR3Q6ZT12 1888 aa24.06■■□□□ 1.44
TUBA1A-206ENST00000550254 HMGB2P26583 209 aaKnown RBP24.05■■□□□ 1.44
TUBA1A-206ENST00000550254 COL23A1Q86Y22 540 aaPredicted RBP24.05■■□□□ 1.44
TUBA1A-206ENST00000550254 SLC52A2Q9HAB3 445 aa24.05■■□□□ 1.44
TUBA1A-206ENST00000550254 GAS2L2Q8NHY3 880 aa24.04■■□□□ 1.44
TUBA1A-206ENST00000550254 SLC16A10Q8TF71 515 aa24.04■■□□□ 1.44
TUBA1A-206ENST00000550254 RBM42Q9BTD8 480 aaKnown RBP24.04■■□□□ 1.44
TUBA1A-206ENST00000550254 PPP1R1BQ9UD71 204 aaPredicted RBP24.04■■□□□ 1.44
TUBA1A-206ENST00000550254 FCHSD2O94868 740 aa24.03■■□□□ 1.44
TUBA1A-206ENST00000550254 AMIGO3Q86WK7 504 aa24.03■■□□□ 1.44
TUBA1A-206ENST00000550254 COL5A3P25940 1745 aaPredicted RBP24.03■■□□□ 1.44
TUBA1A-206ENST00000550254 MAP3K5Q99683 1374 aa24.02■■□□□ 1.44
TUBA1A-206ENST00000550254 GNAT3A8MTJ3 354 aa24.01■■□□□ 1.43
TUBA1A-206ENST00000550254 SMIM5Q71RC9 77 aa24.01■■□□□ 1.43
TUBA1A-206ENST00000550254 IL17REQ8NFR9 667 aa24.01■■□□□ 1.43
TUBA1A-206ENST00000550254 AK7Q96M32 723 aa24.01■■□□□ 1.43
TUBA1A-206ENST00000550254 TJP1Q07157 1748 aa23.99■■□□□ 1.43
TUBA1A-206ENST00000550254 SIPA1L3O60292 1781 aaPredicted RBP23.99■■□□□ 1.43
TUBA1A-206ENST00000550254 PTCD1O75127 700 aaKnown RBP23.99■■□□□ 1.43
TUBA1A-206ENST00000550254 CICQ96RK0 1608 aaPredicted RBP23.99■■□□□ 1.43
TUBA1A-206ENST00000550254 MSH5O43196 834 aa23.98■■□□□ 1.43
TUBA1A-206ENST00000550254 FLAD1Q8NFF5 587 aa23.98■■□□□ 1.43
TUBA1A-206ENST00000550254 SLC39A6Q13433 755 aa23.97■■□□□ 1.43
TUBA1A-206ENST00000550254 MYBBP1AQ9BQG0 1328 aaKnown RBP23.96■■□□□ 1.43
TUBA1A-206ENST00000550254 MYH14Q7Z406 1995 aaKnown RBP23.96■■□□□ 1.43
TUBA1A-206ENST00000550254 KCPQ6ZWJ8 1503 aa23.95■■□□□ 1.43
TUBA1A-206ENST00000550254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.95■■□□□ 1.42
TUBA1A-206ENST00000550254 GNPATO15228 680 aa23.95■■□□□ 1.42
TUBA1A-206ENST00000550254 PHF14O94880 888 aa23.95■■□□□ 1.42
TUBA1A-206ENST00000550254 UBR2Q8IWV8 1755 aa23.95■■□□□ 1.42
TUBA1A-206ENST00000550254 CEMIPQ8WUJ3 1361 aa23.94■■□□□ 1.42
TUBA1A-206ENST00000550254 SSFA2P28290 1259 aa23.94■■□□□ 1.42
TUBA1A-206ENST00000550254 RC3H1Q5TC82 1133 aaKnown RBP23.94■■□□□ 1.42
TUBA1A-206ENST00000550254 ARXQ96QS3 562 aa23.94■■□□□ 1.42
TUBA1A-206ENST00000550254 PLEKHF1Q96S99 279 aa23.94■■□□□ 1.42
TUBA1A-206ENST00000550254 CNTNAP4Q9C0A0 1308 aa23.93■■□□□ 1.42
TUBA1A-206ENST00000550254 PRKRIP1Q9H875 184 aaPredicted RBP23.93■■□□□ 1.42
TUBA1A-206ENST00000550254 DLG5Q8TDM6 1919 aa23.92■■□□□ 1.42
TUBA1A-206ENST00000550254 TEFQ10587 303 aa23.91■■□□□ 1.42
TUBA1A-206ENST00000550254 MSL1Q68DK7 614 aa23.91■■□□□ 1.42
TUBA1A-206ENST00000550254 FHDC1Q9C0D6 1143 aaPredicted RBP23.91■■□□□ 1.42
TUBA1A-206ENST00000550254 ZNF316A6NFI3 1004 aaPredicted RBP23.9■■□□□ 1.42
TUBA1A-206ENST00000550254 POLD1P28340 1107 aa23.9■■□□□ 1.42
TUBA1A-206ENST00000550254 SYT17Q9BSW7 474 aa23.9■■□□□ 1.42
TUBA1A-206ENST00000550254 DNAJC10Q8IXB1 793 aa23.89■■□□□ 1.41
TUBA1A-206ENST00000550254 RTCBQ9Y3I0 505 aaKnown RBP23.89■■□□□ 1.41
TUBA1A-206ENST00000550254 RPS6KA4O75676 772 aa23.88■■□□□ 1.41
TUBA1A-206ENST00000550254 CRKLP46109 303 aaKnown RBP23.88■■□□□ 1.41
TUBA1A-206ENST00000550254 MCM10Q7L590 875 aa23.88■■□□□ 1.41
TUBA1A-206ENST00000550254 HTATSF1O43719 755 aaKnown RBP23.87■■□□□ 1.41
TUBA1A-206ENST00000550254 DCTN1Q14203 1278 aa23.87■■□□□ 1.41
TUBA1A-206ENST00000550254 TRAPPC3LQ5T215 181 aa23.86■■□□□ 1.41
TUBA1A-206ENST00000550254 INTS5Q6P9B9 1019 aaKnown RBP23.86■■□□□ 1.41
TUBA1A-206ENST00000550254 ZNF790Q6PG37 636 aa23.86■■□□□ 1.41
TUBA1A-206ENST00000550254 RTF1Q92541 710 aaKnown RBP23.86■■□□□ 1.41
TUBA1A-206ENST00000550254 C4AP0C0L4 1744 aa23.86■■□□□ 1.41
TUBA1A-206ENST00000550254 TTC5Q8N0Z6 440 aa23.85■■□□□ 1.41
TUBA1A-206ENST00000550254 VSIG10Q8N0Z9 540 aa23.85■■□□□ 1.41
TUBA1A-206ENST00000550254 ARHGEF1Q92888 912 aaKnown RBP23.85■■□□□ 1.41
TUBA1A-206ENST00000550254 NEFMP07197 916 aa23.84■■□□□ 1.41
TUBA1A-206ENST00000550254 CYP19A1P11511 503 aaPredicted RBP23.84■■□□□ 1.41
TUBA1A-206ENST00000550254 ZNF496Q96IT1 587 aaPredicted RBP23.84■■□□□ 1.41
TUBA1A-206ENST00000550254 PNNQ9H307 717 aaKnown RBP23.84■■□□□ 1.41
TUBA1A-206ENST00000550254 BTBD11A6QL63 1104 aa23.83■■□□□ 1.41
TUBA1A-206ENST00000550254 KCNQ3O43525 872 aa23.83■■□□□ 1.41
TUBA1A-206ENST00000550254 ADRA2BP18089 450 aa23.83■■□□□ 1.41
TUBA1A-206ENST00000550254 NFE2L2Q16236 605 aa23.83■■□□□ 1.41
TUBA1A-206ENST00000550254 HEG1Q9ULI3 1381 aa23.82■■□□□ 1.4
TUBA1A-206ENST00000550254 CCDC87Q9NVE4 849 aa23.81■■□□□ 1.4
TUBA1A-206ENST00000550254 MAPK8IP3Q9UPT6 1336 aa23.81■■□□□ 1.4
TUBA1A-206ENST00000550254 KLHL34Q8N239 644 aa23.8■■□□□ 1.4
TUBA1A-206ENST00000550254 RFC4P35249 363 aa23.79■■□□□ 1.4
TUBA1A-206ENST00000550254 GYS1P13807 737 aa23.78■■□□□ 1.4
TUBA1A-206ENST00000550254 FMNL2Q96PY5 1086 aa23.78■■□□□ 1.4
TUBA1A-206ENST00000550254 ZBTB1Q9Y2K1 713 aa23.78■■□□□ 1.4
TUBA1A-206ENST00000550254 SOS1Q07889 1333 aaPredicted RBP23.78■■□□□ 1.4
TUBA1A-206ENST00000550254 TAF7Q15545 349 aaPredicted RBP23.77■■□□□ 1.4
TUBA1A-206ENST00000550254 NLGN2Q8NFZ4 835 aa23.76■■□□□ 1.39
TUBA1A-206ENST00000550254 SRP68Q9UHB9 627 aaKnown RBP23.76■■□□□ 1.39
TUBA1A-206ENST00000550254 ADAMTS8Q9UP79 889 aa23.76■■□□□ 1.39
TUBA1A-206ENST00000550254 KDM3BQ7LBC6 1761 aa23.75■■□□□ 1.39
TUBA1A-206ENST00000550254 WDR43Q15061 677 aaKnown RBP eCLIP23.75■■□□□ 1.39
TUBA1A-206ENST00000550254 CCDC146Q8IYE0 955 aa23.75■■□□□ 1.39
TUBA1A-206ENST00000550254 NLGN1Q8N2Q7 840 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms