RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 TSPYL4Q9UJ04 414 aa10.58□□□□□ -0.72
GPN3-207ENST00000550228 ZNF853P0CG23 659 aa10.57□□□□□ -0.72
GPN3-207ENST00000550228 CABP4P57796 275 aa10.57□□□□□ -0.72
GPN3-207ENST00000550228 NKX1-1Q15270 411 aaPredicted RBP10.57□□□□□ -0.72
GPN3-207ENST00000550228 TAF7Q15545 349 aaPredicted RBP10.57□□□□□ -0.72
GPN3-207ENST00000550228 POTEAQ6S8J7 498 aa10.57□□□□□ -0.72
GPN3-207ENST00000550228 SLC52A2Q9HAB3 445 aa10.57□□□□□ -0.72
GPN3-207ENST00000550228 BTBD11A6QL63 1104 aa10.56□□□□□ -0.72
GPN3-207ENST00000550228 CHL1O00533 1208 aa10.56□□□□□ -0.72
GPN3-207ENST00000550228 RXRBP28702 533 aa10.56□□□□□ -0.72
GPN3-207ENST00000550228 EXOSC9Q06265 439 aaKnown RBP10.56□□□□□ -0.72
GPN3-207ENST00000550228 FAM182BQ5T319 152 aa10.56□□□□□ -0.72
GPN3-207ENST00000550228 TRMT2AQ8IZ69 625 aaKnown RBP10.56□□□□□ -0.72
GPN3-207ENST00000550228 NFATC2IPQ8NCF5 419 aa10.56□□□□□ -0.72
GPN3-207ENST00000550228 ACSBG1Q96GR2 724 aa10.56□□□□□ -0.72
GPN3-207ENST00000550228 ERVV-2B6SEH9 535 aa10.55□□□□□ -0.72
GPN3-207ENST00000550228 ONECUT3O60422 494 aaPredicted RBP10.55□□□□□ -0.72
GPN3-207ENST00000550228 SLC39A6Q13433 755 aa10.55□□□□□ -0.72
GPN3-207ENST00000550228 SYTL4Q96C24 671 aaPredicted RBP10.55□□□□□ -0.72
GPN3-207ENST00000550228 TMOD3Q9NYL9 352 aa10.55□□□□□ -0.72
GPN3-207ENST00000550228 RGS12O14924 1447 aa10.54□□□□□ -0.72
GPN3-207ENST00000550228 KCNQ3O43525 872 aa10.54□□□□□ -0.72
GPN3-207ENST00000550228 KRT24Q2M2I5 525 aa10.54□□□□□ -0.72
GPN3-207ENST00000550228 PAPPAQ13219 1627 aa10.54□□□□□ -0.72
GPN3-207ENST00000550228 ELL2O00472 640 aaPredicted RBP10.53□□□□□ -0.72
GPN3-207ENST00000550228 PRIM1P49642 420 aaKnown RBP10.53□□□□□ -0.72
GPN3-207ENST00000550228 KRT27Q7Z3Y8 459 aa10.53□□□□□ -0.72
GPN3-207ENST00000550228 SBF2Q86WG5 1849 aa10.52□□□□□ -0.73
GPN3-207ENST00000550228 TTC5Q8N0Z6 440 aa10.52□□□□□ -0.73
GPN3-207ENST00000550228 TSPYL6Q8N831 410 aa10.52□□□□□ -0.73
GPN3-207ENST00000550228 C8orf58Q8NAV2 365 aa10.52□□□□□ -0.73
GPN3-207ENST00000550228 PIGBQ92521 554 aa10.52□□□□□ -0.73
GPN3-207ENST00000550228 BABAM1Q9NWV8 329 aa10.52□□□□□ -0.73
GPN3-207ENST00000550228 NHSQ6T4R5 1651 aa10.52□□□□□ -0.73
GPN3-207ENST00000550228 BCL9O00512 1426 aa10.51□□□□□ -0.73
GPN3-207ENST00000550228 C5P01031 1676 aa10.51□□□□□ -0.73
GPN3-207ENST00000550228 EIF4A1P60842 406 aaKnown RBP10.51□□□□□ -0.73
GPN3-207ENST00000550228 TWISTNBQ3B726 338 aaPredicted RBP10.51□□□□□ -0.73
GPN3-207ENST00000550228 ZNF790Q6PG37 636 aa10.51□□□□□ -0.73
GPN3-207ENST00000550228 RCAN3Q9UKA8 241 aa10.51□□□□□ -0.73
GPN3-207ENST00000550228 UBR2Q8IWV8 1755 aa10.51□□□□□ -0.73
GPN3-207ENST00000550228 BTAF1O14981 1849 aa10.5□□□□□ -0.73
GPN3-207ENST00000550228 TCERG1O14776 1098 aaKnown RBP10.5□□□□□ -0.73
GPN3-207ENST00000550228 KCNQ2O43526 872 aa10.5□□□□□ -0.73
GPN3-207ENST00000550228 KCPQ6ZWJ8 1503 aa10.49□□□□□ -0.73
GPN3-207ENST00000550228 PTCD1O75127 700 aaKnown RBP10.49□□□□□ -0.73
GPN3-207ENST00000550228 NECTIN2Q92692 538 aa10.49□□□□□ -0.73
GPN3-207ENST00000550228 ZNF496Q96IT1 587 aaPredicted RBP10.49□□□□□ -0.73
GPN3-207ENST00000550228 BCL2L13Q9BXK5 485 aa10.49□□□□□ -0.73
GPN3-207ENST00000550228 ATG3Q9NT62 314 aa10.49□□□□□ -0.73
GPN3-207ENST00000550228 ASAP1Q9ULH1 1129 aa10.49□□□□□ -0.73
GPN3-207ENST00000550228 LAMB4A4D0S4 1761 aa10.48□□□□□ -0.73
GPN3-207ENST00000550228 VAMP4O75379 141 aa10.48□□□□□ -0.73
GPN3-207ENST00000550228 CT47B1P0C2W7 299 aaPredicted RBP10.48□□□□□ -0.73
GPN3-207ENST00000550228 FAM196AQ6ZSG2 479 aa10.48□□□□□ -0.73
GPN3-207ENST00000550228 PTF1AQ7RTS3 328 aa10.48□□□□□ -0.73
GPN3-207ENST00000550228 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
GPN3-207ENST00000550228 RBM42Q9BTD8 480 aaKnown RBP10.48□□□□□ -0.73
GPN3-207ENST00000550228 SUPT16HQ9Y5B9 1047 aaKnown RBP10.48□□□□□ -0.73
GPN3-207ENST00000550228 PRAMEF22A3QJZ6 481 aa10.47□□□□□ -0.73
GPN3-207ENST00000550228 BCAR3O75815 825 aa10.47□□□□□ -0.73
GPN3-207ENST00000550228 EIF2S2P20042 333 aaKnown RBP10.47□□□□□ -0.73
GPN3-207ENST00000550228 RARSP54136 660 aaKnown RBP10.47□□□□□ -0.73
GPN3-207ENST00000550228 SSH1Q8WYL5 1049 aa10.47□□□□□ -0.73
GPN3-207ENST00000550228 SMC4Q9NTJ3 1288 aa10.47□□□□□ -0.73
GPN3-207ENST00000550228 GIGYF1O75420 1035 aaPredicted RBP10.46□□□□□ -0.73
GPN3-207ENST00000550228 HDGFL1Q5TGJ6 251 aa10.46□□□□□ -0.73
GPN3-207ENST00000550228 PALLDQ8WX93 1383 aa10.46□□□□□ -0.74
GPN3-207ENST00000550228 HEG1Q9ULI3 1381 aa10.46□□□□□ -0.74
GPN3-207ENST00000550228 TJP1Q07157 1748 aa10.46□□□□□ -0.74
GPN3-207ENST00000550228 TRIM37O94972 964 aa10.45□□□□□ -0.74
GPN3-207ENST00000550228 HOXB7P09629 217 aa10.45□□□□□ -0.74
GPN3-207ENST00000550228 SNRPA1P09661 255 aaKnown RBP10.45□□□□□ -0.74
GPN3-207ENST00000550228 CANXP27824 592 aaKnown RBP10.45□□□□□ -0.74
GPN3-207ENST00000550228 FRAT1Q92837 279 aaPredicted RBP10.45□□□□□ -0.74
GPN3-207ENST00000550228 SMARCC1Q92922 1105 aaPredicted RBP10.45□□□□□ -0.74
GPN3-207ENST00000550228 SOS1Q07889 1333 aaPredicted RBP10.44□□□□□ -0.74
GPN3-207ENST00000550228 PLIN1O60240 522 aa10.44□□□□□ -0.74
GPN3-207ENST00000550228 RRP1P56182 461 aaKnown RBP10.44□□□□□ -0.74
GPN3-207ENST00000550228 ALDH1L2Q3SY69 923 aa10.44□□□□□ -0.74
GPN3-207ENST00000550228 CCDC30Q5VVM6 783 aa10.44□□□□□ -0.74
GPN3-207ENST00000550228 DNAJC10Q8IXB1 793 aa10.44□□□□□ -0.74
GPN3-207ENST00000550228 ZNF428Q96B54 188 aa10.44□□□□□ -0.74
GPN3-207ENST00000550228 STK31Q9BXU1 1019 aa10.44□□□□□ -0.74
GPN3-207ENST00000550228 BCL11BQ9C0K0 894 aaPredicted RBP10.44□□□□□ -0.74
GPN3-207ENST00000550228 CACNA1FO60840 1977 aa10.43□□□□□ -0.74
GPN3-207ENST00000550228 ANXA1P04083 346 aa10.43□□□□□ -0.74
GPN3-207ENST00000550228 IRX6P78412 446 aaPredicted RBP10.43□□□□□ -0.74
GPN3-207ENST00000550228 MRPL50Q8N5N7 158 aaKnown RBP10.43□□□□□ -0.74
GPN3-207ENST00000550228 SLC4A9Q96Q91 983 aa10.43□□□□□ -0.74
GPN3-207ENST00000550228 CHPF2Q9P2E5 772 aa10.43□□□□□ -0.74
GPN3-207ENST00000550228 USP16Q9Y5T5 823 aa10.43□□□□□ -0.74
GPN3-207ENST00000550228 LY75O60449 1722 aa10.43□□□□□ -0.74
GPN3-207ENST00000550228 TNS1Q9HBL0 1735 aaKnown RBP10.43□□□□□ -0.74
GPN3-207ENST00000550228 LOC102724428A0A0B4J2F2 783 aa10.42□□□□□ -0.74
GPN3-207ENST00000550228 SLC4A2P04920 1241 aa10.42□□□□□ -0.74
GPN3-207ENST00000550228 ATP6V1AP38606 617 aa10.42□□□□□ -0.74
GPN3-207ENST00000550228 PIP4K2AP48426 406 aaPredicted RBP10.42□□□□□ -0.74
GPN3-207ENST00000550228 SIK1P57059 783 aa10.42□□□□□ -0.74
GPN3-207ENST00000550228 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms