RNA–Protein interactions for RNA: ENST00000550146.5

TMEM106C-213, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 663 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-213ENST00000550146 MTHFSDQ2M296 383 aaKnown RBP8.58□□□□□ -1.04
TMEM106C-213ENST00000550146 MTFR1LQ9H019 292 aa8.58□□□□□ -1.04
TMEM106C-213ENST00000550146 ATG3Q9NT62 314 aa8.58□□□□□ -1.04
TMEM106C-213ENST00000550146 ASAP1Q9ULH1 1129 aa8.58□□□□□ -1.04
TMEM106C-213ENST00000550146 ATF5Q9Y2D1 282 aaPredicted RBP8.58□□□□□ -1.04
TMEM106C-213ENST00000550146 KDM6AO15550 1401 aaPredicted RBP8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 C5P01031 1676 aa8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 LOC102724428A0A0B4J2F2 783 aa8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 ATP6V1AP38606 617 aa8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 SIK1P57059 783 aa8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 NFATC2IPQ8NCF5 419 aa8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 FLAD1Q8NFF5 587 aa8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 GAS2L2Q8NHY3 880 aa8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 SLC16A10Q8TF71 515 aa8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 AK7Q96M32 723 aa8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 RBM42Q9BTD8 480 aaKnown RBP8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 SRCAPQ6ZRS2 3230 aa8.57□□□□□ -1.04
TMEM106C-213ENST00000550146 PNPLA7Q6ZV29 1317 aa8.56□□□□□ -1.04
TMEM106C-213ENST00000550146 NEFMP07197 916 aa8.56□□□□□ -1.04
TMEM106C-213ENST00000550146 PRKAR2BP31323 418 aa8.56□□□□□ -1.04
TMEM106C-213ENST00000550146 RALBP1Q15311 655 aa8.56□□□□□ -1.04
TMEM106C-213ENST00000550146 UBR3Q6ZT12 1888 aa8.55□□□□□ -1.04
TMEM106C-213ENST00000550146 GNAT3A8MTJ3 354 aa8.55□□□□□ -1.04
TMEM106C-213ENST00000550146 RNMTO43148 476 aaKnown RBP8.55□□□□□ -1.04
TMEM106C-213ENST00000550146 PTCD1O75127 700 aaKnown RBP8.55□□□□□ -1.04
TMEM106C-213ENST00000550146 FCHSD2O94868 740 aa8.55□□□□□ -1.04
TMEM106C-213ENST00000550146 POLD1P28340 1107 aa8.55□□□□□ -1.04
TMEM106C-213ENST00000550146 RSPH6AQ9H0K4 717 aa8.55□□□□□ -1.04
TMEM106C-213ENST00000550146 SLC52A2Q9HAB3 445 aa8.55□□□□□ -1.04
TMEM106C-213ENST00000550146 LGR6Q9HBX8 967 aa8.55□□□□□ -1.04
TMEM106C-213ENST00000550146 ZNF831Q5JPB2 1677 aa8.55□□□□□ -1.04
TMEM106C-213ENST00000550146 ADAMTS7Q9UKP4 1686 aa8.55□□□□□ -1.04
TMEM106C-213ENST00000550146 MYH14Q7Z406 1995 aaKnown RBP8.54□□□□□ -1.04
TMEM106C-213ENST00000550146 MAP3K5Q99683 1374 aa8.54□□□□□ -1.04
TMEM106C-213ENST00000550146 PTGER2P43116 358 aa8.54□□□□□ -1.04
TMEM106C-213ENST00000550146 TEFQ10587 303 aa8.54□□□□□ -1.04
TMEM106C-213ENST00000550146 ITPK1Q13572 414 aa8.54□□□□□ -1.04
TMEM106C-213ENST00000550146 COL23A1Q86Y22 540 aaPredicted RBP8.54□□□□□ -1.04
TMEM106C-213ENST00000550146 LINC00116Q8NCU8 138 aa8.54□□□□□ -1.04
TMEM106C-213ENST00000550146 PHACTR3Q96KR7 559 aa8.54□□□□□ -1.04
TMEM106C-213ENST00000550146 PNNQ9H307 717 aaKnown RBP8.54□□□□□ -1.04
TMEM106C-213ENST00000550146 GNPATO15228 680 aa8.53□□□□□ -1.04
TMEM106C-213ENST00000550146 PHF14O94880 888 aa8.53□□□□□ -1.04
TMEM106C-213ENST00000550146 RTF1Q92541 710 aaKnown RBP8.53□□□□□ -1.04
TMEM106C-213ENST00000550146 ARXQ96QS3 562 aa8.53□□□□□ -1.04
TMEM106C-213ENST00000550146 C4BP0C0L5 1744 aa8.53□□□□□ -1.04
TMEM106C-213ENST00000550146 MYBBP1AQ9BQG0 1328 aaKnown RBP8.53□□□□□ -1.04
TMEM106C-213ENST00000550146 COL5A3P25940 1745 aaPredicted RBP8.52□□□□□ -1.05
TMEM106C-213ENST00000550146 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.52□□□□□ -1.05
TMEM106C-213ENST00000550146 SSFA2P28290 1259 aa8.52□□□□□ -1.05
TMEM106C-213ENST00000550146 TTC5Q8N0Z6 440 aa8.52□□□□□ -1.05
TMEM106C-213ENST00000550146 SGIP1Q9BQI5 828 aa8.52□□□□□ -1.05
TMEM106C-213ENST00000550146 RTCBQ9Y3I0 505 aaKnown RBP8.52□□□□□ -1.05
TMEM106C-213ENST00000550146 CICQ96RK0 1608 aaPredicted RBP8.51□□□□□ -1.05
TMEM106C-213ENST00000550146 SIPA1L3O60292 1781 aaPredicted RBP8.51□□□□□ -1.05
TMEM106C-213ENST00000550146 TRAPPC3LQ5T215 181 aa8.51□□□□□ -1.05
TMEM106C-213ENST00000550146 RC3H1Q5TC82 1133 aaKnown RBP8.51□□□□□ -1.05
TMEM106C-213ENST00000550146 KLHL34Q8N239 644 aa8.51□□□□□ -1.05
TMEM106C-213ENST00000550146 IL17REQ8NFR9 667 aa8.51□□□□□ -1.05
TMEM106C-213ENST00000550146 SLC4A9Q96Q91 983 aa8.51□□□□□ -1.05
TMEM106C-213ENST00000550146 FHDC1Q9C0D6 1143 aaPredicted RBP8.51□□□□□ -1.05
TMEM106C-213ENST00000550146 MAPK8IP3Q9UPT6 1336 aa8.51□□□□□ -1.05
TMEM106C-213ENST00000550146 MRC1P22897 1456 aa8.51□□□□□ -1.05
TMEM106C-213ENST00000550146 DLG5Q8TDM6 1919 aa8.5□□□□□ -1.05
TMEM106C-213ENST00000550146 ZNF316A6NFI3 1004 aaPredicted RBP8.5□□□□□ -1.05
TMEM106C-213ENST00000550146 HTATSF1O43719 755 aaKnown RBP8.5□□□□□ -1.05
TMEM106C-213ENST00000550146 RPS6KA4O75676 772 aa8.5□□□□□ -1.05
TMEM106C-213ENST00000550146 SLC39A6Q13433 755 aa8.5□□□□□ -1.05
TMEM106C-213ENST00000550146 MSL1Q68DK7 614 aa8.5□□□□□ -1.05
TMEM106C-213ENST00000550146 PPP4R3CPQ6ZMV5 832 aa8.5□□□□□ -1.05
TMEM106C-213ENST00000550146 SYT17Q9BSW7 474 aa8.5□□□□□ -1.05
TMEM106C-213ENST00000550146 UBR2Q8IWV8 1755 aa8.5□□□□□ -1.05
TMEM106C-213ENST00000550146 CNTNAP4Q9C0A0 1308 aa8.5□□□□□ -1.05
TMEM106C-213ENST00000550146 BTBD11A6QL63 1104 aa8.49□□□□□ -1.05
TMEM106C-213ENST00000550146 RFC4P35249 363 aa8.49□□□□□ -1.05
TMEM106C-213ENST00000550146 CRKLP46109 303 aaKnown RBP8.49□□□□□ -1.05
TMEM106C-213ENST00000550146 WDR43Q15061 677 aaKnown RBP eCLIP8.49□□□□□ -1.05
TMEM106C-213ENST00000550146 SMIM5Q71RC9 77 aa8.49□□□□□ -1.05
TMEM106C-213ENST00000550146 AMIGO3Q86WK7 504 aa8.49□□□□□ -1.05
TMEM106C-213ENST00000550146 DNAJC10Q8IXB1 793 aa8.49□□□□□ -1.05
TMEM106C-213ENST00000550146 VSIG10Q8N0Z9 540 aa8.49□□□□□ -1.05
TMEM106C-213ENST00000550146 PRKRIP1Q9H875 184 aaPredicted RBP8.49□□□□□ -1.05
TMEM106C-213ENST00000550146 TJP1Q07157 1748 aa8.49□□□□□ -1.05
TMEM106C-213ENST00000550146 CEMIPQ8WUJ3 1361 aa8.48□□□□□ -1.05
TMEM106C-213ENST00000550146 STARD3NLO95772 234 aa8.48□□□□□ -1.05
TMEM106C-213ENST00000550146 NFE2L2Q16236 605 aa8.48□□□□□ -1.05
TMEM106C-213ENST00000550146 ZNF790Q6PG37 636 aa8.48□□□□□ -1.05
TMEM106C-213ENST00000550146 MCM10Q7L590 875 aa8.48□□□□□ -1.05
TMEM106C-213ENST00000550146 NLGN1Q8N2Q7 840 aa8.48□□□□□ -1.05
TMEM106C-213ENST00000550146 ARHGEF1Q92888 912 aaKnown RBP8.48□□□□□ -1.05
TMEM106C-213ENST00000550146 FMNL2Q96PY5 1086 aa8.48□□□□□ -1.05
TMEM106C-213ENST00000550146 TEX13AQ9BXU3 409 aaPredicted RBP8.48□□□□□ -1.05
TMEM106C-213ENST00000550146 CCDC87Q9NVE4 849 aa8.48□□□□□ -1.05
TMEM106C-213ENST00000550146 CYP19A1P11511 503 aaPredicted RBP8.47□□□□□ -1.05
TMEM106C-213ENST00000550146 DCTN1Q14203 1278 aa8.47□□□□□ -1.05
TMEM106C-213ENST00000550146 INTS5Q6P9B9 1019 aaKnown RBP8.47□□□□□ -1.05
TMEM106C-213ENST00000550146 ZNF496Q96IT1 587 aaPredicted RBP8.47□□□□□ -1.05
TMEM106C-213ENST00000550146 PLEKHF1Q96S99 279 aa8.47□□□□□ -1.05
TMEM106C-213ENST00000550146 C4AP0C0L4 1744 aa8.46□□□□□ -1.05
TMEM106C-213ENST00000550146 KCPQ6ZWJ8 1503 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms