RNA–Protein interactions for RNA: ENST00000550104.5

ATXN2-219, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,648 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-219ENST00000550104 PPP1R42Q7Z4L9 355 aa20.38■□□□□ 0.85
ATXN2-219ENST00000550104 CHPF2Q9P2E5 772 aa20.38■□□□□ 0.85
ATXN2-219ENST00000550104 H3BQV1 296 aa20.38■□□□□ 0.85
ATXN2-219ENST00000550104 IFFO2Q5TF58 517 aa20.38■□□□□ 0.85
ATXN2-219ENST00000550104 ROBO2Q9HCK4 1378 aa20.37■□□□□ 0.85
ATXN2-219ENST00000550104 FAM184AQ8NB25 1140 aa20.37■□□□□ 0.85
ATXN2-219ENST00000550104 PIK3R4Q99570 1358 aa20.37■□□□□ 0.85
ATXN2-219ENST00000550104 CWC22Q9HCG8 908 aaKnown RBP20.37■□□□□ 0.85
ATXN2-219ENST00000550104 KIDINS220Q9ULH0 1771 aa20.36■□□□□ 0.85
ATXN2-219ENST00000550104 HTATSF1O43719 755 aaKnown RBP20.36■□□□□ 0.85
ATXN2-219ENST00000550104 SBNO1A3KN83 1393 aa20.36■□□□□ 0.85
ATXN2-219ENST00000550104 PLEKHM2Q8IWE5 1019 aa20.35■□□□□ 0.85
ATXN2-219ENST00000550104 RAB11FIP3O75154 756 aa20.35■□□□□ 0.85
ATXN2-219ENST00000550104 TNPO1Q92973 898 aaKnown RBP20.35■□□□□ 0.85
ATXN2-219ENST00000550104 MSH6P52701 1360 aa20.35■□□□□ 0.85
ATXN2-219ENST00000550104 MAP3K2Q9Y2U5 619 aa20.35■□□□□ 0.85
ATXN2-219ENST00000550104 CHRNA2Q15822 529 aa20.34■□□□□ 0.85
ATXN2-219ENST00000550104 OTUD7AQ8TE49 926 aaPredicted RBP20.34■□□□□ 0.85
ATXN2-219ENST00000550104 ATP7BP35670 1465 aa20.34■□□□□ 0.85
ATXN2-219ENST00000550104 SSFA2P28290 1259 aa20.34■□□□□ 0.85
ATXN2-219ENST00000550104 PDE1AP54750 535 aa20.34■□□□□ 0.85
ATXN2-219ENST00000550104 FAM135BQ49AJ0 1406 aa20.33■□□□□ 0.85
ATXN2-219ENST00000550104 TOMM22Q9NS69 142 aa20.33■□□□□ 0.85
ATXN2-219ENST00000550104 SETBP1Q9Y6X0 1596 aa20.33■□□□□ 0.85
ATXN2-219ENST00000550104 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.84
ATXN2-219ENST00000550104 QRICH2Q9H0J4 1663 aa20.33■□□□□ 0.84
ATXN2-219ENST00000550104 A2ML1A8K2U0 1454 aa20.33■□□□□ 0.84
ATXN2-219ENST00000550104 MAP3K5Q99683 1374 aa20.32■□□□□ 0.84
ATXN2-219ENST00000550104 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.32■□□□□ 0.84
ATXN2-219ENST00000550104 PTCD1O75127 700 aaKnown RBP20.32■□□□□ 0.84
ATXN2-219ENST00000550104 GCP02774 474 aa20.32■□□□□ 0.84
ATXN2-219ENST00000550104 NASPP49321 788 aaPredicted RBP20.32■□□□□ 0.84
ATXN2-219ENST00000550104 MYD88Q99836 296 aa20.32■□□□□ 0.84
ATXN2-219ENST00000550104 PHAXQ9H814 394 aaKnown RBP20.32■□□□□ 0.84
ATXN2-219ENST00000550104 GTF2E1P29083 439 aaPredicted RBP20.31■□□□□ 0.84
ATXN2-219ENST00000550104 RNF214Q8ND24 703 aa20.31■□□□□ 0.84
ATXN2-219ENST00000550104 AATKQ6ZMQ8 1374 aa20.31■□□□□ 0.84
ATXN2-219ENST00000550104 GLRX3O76003 335 aaKnown RBP20.31■□□□□ 0.84
ATXN2-219ENST00000550104 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
ATXN2-219ENST00000550104 KIF3AQ9Y496 699 aa20.31■□□□□ 0.84
ATXN2-219ENST00000550104 TULP4Q9NRJ4 1543 aa20.31■□□□□ 0.84
ATXN2-219ENST00000550104 LARP1Q6PKG0 1096 aaKnown RBP20.31■□□□□ 0.84
ATXN2-219ENST00000550104 IP6K1Q92551 441 aa20.3■□□□□ 0.84
ATXN2-219ENST00000550104 ARID3AQ99856 593 aa20.3■□□□□ 0.84
ATXN2-219ENST00000550104 FOSBP53539 338 aa20.3■□□□□ 0.84
ATXN2-219ENST00000550104 IQGAP1P46940 1657 aa20.3■□□□□ 0.84
ATXN2-219ENST00000550104 HIP1O00291 1037 aa20.3■□□□□ 0.84
ATXN2-219ENST00000550104 PSMA5P28066 241 aa20.3■□□□□ 0.84
ATXN2-219ENST00000550104 ATP8B2P98198 1209 aa20.3■□□□□ 0.84
ATXN2-219ENST00000550104 SLC39A6Q13433 755 aa20.3■□□□□ 0.84
ATXN2-219ENST00000550104 ORAI2Q96SN7 254 aa20.3■□□□□ 0.84
ATXN2-219ENST00000550104 HYPKQ9NX55 129 aa20.3■□□□□ 0.84
ATXN2-219ENST00000550104 CCDC8Q9H0W5 538 aaPredicted RBP20.3■□□□□ 0.84
ATXN2-219ENST00000550104 WASHC4Q2M389 1173 aa20.29■□□□□ 0.84
ATXN2-219ENST00000550104 AKAP4Q5JQC9 854 aa20.29■□□□□ 0.84
ATXN2-219ENST00000550104 LRRFIP1Q32MZ4 808 aaKnown RBP20.29■□□□□ 0.84
ATXN2-219ENST00000550104 CYP46A1Q9Y6A2 500 aa20.29■□□□□ 0.84
ATXN2-219ENST00000550104 ABCC4O15439 1325 aa20.29■□□□□ 0.84
ATXN2-219ENST00000550104 APPP05067 770 aa20.28■□□□□ 0.84
ATXN2-219ENST00000550104 JAKMIP1Q96N16 626 aaKnown RBP20.28■□□□□ 0.84
ATXN2-219ENST00000550104 ALKQ9UM73 1620 aa20.28■□□□□ 0.84
ATXN2-219ENST00000550104 RHPN1Q8TCX5 695 aa20.28■□□□□ 0.84
ATXN2-219ENST00000550104 DIP2CQ9Y2E4 1556 aa20.28■□□□□ 0.84
ATXN2-219ENST00000550104 BOLA2Q9H3K6 86 aa20.28■□□□□ 0.84
ATXN2-219ENST00000550104 GRPEL1Q9HAV7 217 aa20.28■□□□□ 0.84
ATXN2-219ENST00000550104 CABLES1Q8TDN4 633 aa20.27■□□□□ 0.84
ATXN2-219ENST00000550104 CAMSAP1Q5T5Y3 1602 aa20.27■□□□□ 0.84
ATXN2-219ENST00000550104 FIBPO43427 364 aa20.26■□□□□ 0.83
ATXN2-219ENST00000550104 JARID2Q92833 1246 aaPredicted RBP20.26■□□□□ 0.83
ATXN2-219ENST00000550104 LGR6Q9HBX8 967 aa20.26■□□□□ 0.83
ATXN2-219ENST00000550104 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
ATXN2-219ENST00000550104 FAM177BA6PVY3 158 aa20.26■□□□□ 0.83
ATXN2-219ENST00000550104 SF3A1Q15459 793 aaKnown RBP20.26■□□□□ 0.83
ATXN2-219ENST00000550104 CCDC85AQ96PX6 553 aaPredicted RBP20.25■□□□□ 0.83
ATXN2-219ENST00000550104 CASTP20810 708 aaKnown RBP20.25■□□□□ 0.83
ATXN2-219ENST00000550104 LARP6Q9BRS8 491 aaKnown RBP20.25■□□□□ 0.83
ATXN2-219ENST00000550104 MBD3O95983 291 aa20.25■□□□□ 0.83
ATXN2-219ENST00000550104 NBPF6Q5VWK0 638 aa20.25■□□□□ 0.83
ATXN2-219ENST00000550104 IFNL2Q8IZJ0 200 aa20.25■□□□□ 0.83
ATXN2-219ENST00000550104 SNX21Q969T3 373 aa20.25■□□□□ 0.83
ATXN2-219ENST00000550104 NBPF4Q96M43 638 aa20.25■□□□□ 0.83
ATXN2-219ENST00000550104 PRPF40BQ6NWY9 871 aaKnown RBP20.24■□□□□ 0.83
ATXN2-219ENST00000550104 PKNOX2Q96KN3 472 aa20.24■□□□□ 0.83
ATXN2-219ENST00000550104 STK3Q13188 491 aa20.24■□□□□ 0.83
ATXN2-219ENST00000550104 GOLGA6L6A8MZA4 724 aa20.23■□□□□ 0.83
ATXN2-219ENST00000550104 ATP5J2-PTCD1G3V325 749 aa20.23■□□□□ 0.83
ATXN2-219ENST00000550104 ZNF853P0CG23 659 aa20.23■□□□□ 0.83
ATXN2-219ENST00000550104 PIP4K2AP48426 406 aaPredicted RBP20.23■□□□□ 0.83
ATXN2-219ENST00000550104 HSP90AA2PQ14568 343 aaPredicted RBP20.23■□□□□ 0.83
ATXN2-219ENST00000550104 KIF6Q6ZMV9 814 aa20.23■□□□□ 0.83
ATXN2-219ENST00000550104 PDRG1Q9NUG6 133 aa20.23■□□□□ 0.83
ATXN2-219ENST00000550104 ARHGEF10O15013 1369 aa20.23■□□□□ 0.83
ATXN2-219ENST00000550104 NEXMIFQ5QGS0 1516 aa20.23■□□□□ 0.83
ATXN2-219ENST00000550104 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.23■□□□□ 0.83
ATXN2-219ENST00000550104 BICD2Q8TD16 824 aa20.23■□□□□ 0.83
ATXN2-219ENST00000550104 NRXN1Q9ULB1 1477 aa20.23■□□□□ 0.83
ATXN2-219ENST00000550104 WDR33Q9C0J8 1336 aaKnown RBP20.23■□□□□ 0.83
ATXN2-219ENST00000550104 ECHDC1Q9NTX5 307 aa20.22■□□□□ 0.83
ATXN2-219ENST00000550104 USP6P35125 1406 aa20.22■□□□□ 0.83
ATXN2-219ENST00000550104 USP19O94966 1318 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms