RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 ZNF530Q6P9A1 599 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-209ENST00000550020 TBC1D9Q6ZT07 1266 aa11.05□□□□□ -0.64
TMEM116-209ENST00000550020 KRT28Q7Z3Y7 464 aa11.05□□□□□ -0.64
TMEM116-209ENST00000550020 CIZ1Q9ULV3 898 aaPredicted RBP11.05□□□□□ -0.64
TMEM116-209ENST00000550020 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
TMEM116-209ENST00000550020 ATP8B2P98198 1209 aa11.04□□□□□ -0.64
TMEM116-209ENST00000550020 HSP90AB4PQ58FF6 505 aa11.04□□□□□ -0.64
TMEM116-209ENST00000550020 NBPF6Q5VWK0 638 aa11.04□□□□□ -0.64
TMEM116-209ENST00000550020 NBPF4Q96M43 638 aa11.04□□□□□ -0.64
TMEM116-209ENST00000550020 OSBPL3Q9H4L5 887 aa11.04□□□□□ -0.64
TMEM116-209ENST00000550020 ANTXR1Q9H6X2 564 aa11.04□□□□□ -0.64
TMEM116-209ENST00000550020 LTN1O94822 1766 aa11.03□□□□□ -0.64
TMEM116-209ENST00000550020 ZBTB7CA1YPR0 619 aa11.03□□□□□ -0.64
TMEM116-209ENST00000550020 RAB11FIP3O75154 756 aa11.03□□□□□ -0.64
TMEM116-209ENST00000550020 UBTFL1P0CB47 393 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-209ENST00000550020 RABEP1Q15276 862 aa11.03□□□□□ -0.64
TMEM116-209ENST00000550020 ANKRD24Q8TF21 1146 aa11.03□□□□□ -0.64
TMEM116-209ENST00000550020 LRRCC1Q9C099 1032 aa11.03□□□□□ -0.64
TMEM116-209ENST00000550020 SLKQ9H2G2 1235 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-209ENST00000550020 C1orf167Q5SNV9 1468 aa11.03□□□□□ -0.64
TMEM116-209ENST00000550020 AOX1Q06278 1338 aa11.03□□□□□ -0.64
TMEM116-209ENST00000550020 MED1Q15648 1581 aaPredicted RBP11.03□□□□□ -0.64
TMEM116-209ENST00000550020 FAM208AQ9UK61 1670 aaKnown RBP11.02□□□□□ -0.64
TMEM116-209ENST00000550020 BTBD11A6QL63 1104 aa11.02□□□□□ -0.65
TMEM116-209ENST00000550020 HSP90AA1P07900 732 aaKnown RBP11.02□□□□□ -0.65
TMEM116-209ENST00000550020 EIF4A1P60842 406 aaKnown RBP11.02□□□□□ -0.65
TMEM116-209ENST00000550020 LMOD2Q6P5Q4 547 aa11.02□□□□□ -0.65
TMEM116-209ENST00000550020 G2E3Q7L622 706 aa11.02□□□□□ -0.65
TMEM116-209ENST00000550020 DBF4Q9UBU7 674 aaPredicted RBP11.02□□□□□ -0.65
TMEM116-209ENST00000550020 ABCC6O95255 1503 aa11.01□□□□□ -0.65
TMEM116-209ENST00000550020 DDX11L8A8MPP1 907 aa11.01□□□□□ -0.65
TMEM116-209ENST00000550020 F6X3S4 739 aa11.01□□□□□ -0.65
TMEM116-209ENST00000550020 FRAT2O75474 233 aaPredicted RBP11.01□□□□□ -0.65
TMEM116-209ENST00000550020 CADPS2Q86UW7 1296 aa11.01□□□□□ -0.65
TMEM116-209ENST00000550020 USHBP1Q8N6Y0 703 aa11.01□□□□□ -0.65
TMEM116-209ENST00000550020 ORAI2Q96SN7 254 aa11.01□□□□□ -0.65
TMEM116-209ENST00000550020 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.01□□□□□ -0.65
TMEM116-209ENST00000550020 SPG7Q9UQ90 795 aa11.01□□□□□ -0.65
TMEM116-209ENST00000550020 LMO7Q8WWI1 1683 aa11.01□□□□□ -0.65
TMEM116-209ENST00000550020 K7ELQ4 463 aaPredicted RBP11□□□□□ -0.65
TMEM116-209ENST00000550020 RNMTO43148 476 aaKnown RBP11□□□□□ -0.65
TMEM116-209ENST00000550020 EPB41L2O43491 1005 aaKnown RBP11□□□□□ -0.65
TMEM116-209ENST00000550020 ALDH1L1O75891 902 aa11□□□□□ -0.65
TMEM116-209ENST00000550020 DDX58O95786 925 aaKnown RBP11□□□□□ -0.65
TMEM116-209ENST00000550020 GSPT1P15170 499 aaKnown RBP11□□□□□ -0.65
TMEM116-209ENST00000550020 MCCP23508 829 aa11□□□□□ -0.65
TMEM116-209ENST00000550020 RAPGEF4Q8WZA2 1011 aa11□□□□□ -0.65
TMEM116-209ENST00000550020 NPHP3Q7Z494 1330 aa11□□□□□ -0.65
TMEM116-209ENST00000550020 IBTKQ9P2D0 1353 aaPredicted RBP11□□□□□ -0.65
TMEM116-209ENST00000550020 CACNA1FO60840 1977 aa10.99□□□□□ -0.65
TMEM116-209ENST00000550020 ERC2O15083 957 aa10.99□□□□□ -0.65
TMEM116-209ENST00000550020 ST18O60284 1047 aa10.99□□□□□ -0.65
TMEM116-209ENST00000550020 SDSP20132 328 aa10.99□□□□□ -0.65
TMEM116-209ENST00000550020 DNAAF4Q8WXU2 420 aa10.99□□□□□ -0.65
TMEM116-209ENST00000550020 GBP4Q96PP9 640 aa10.99□□□□□ -0.65
TMEM116-209ENST00000550020 HYPKQ9NX55 129 aa10.99□□□□□ -0.65
TMEM116-209ENST00000550020 CAMTA1Q9Y6Y1 1673 aa10.98□□□□□ -0.65
TMEM116-209ENST00000550020 N4BP2Q86UW6 1770 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-209ENST00000550020 TATP17735 454 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-209ENST00000550020 MX1P20591 662 aa10.98□□□□□ -0.65
TMEM116-209ENST00000550020 PDE1AP54750 535 aa10.98□□□□□ -0.65
TMEM116-209ENST00000550020 SSH3Q8TE77 659 aa10.98□□□□□ -0.65
TMEM116-209ENST00000550020 RBM33Q96EV2 1170 aaKnown RBP10.98□□□□□ -0.65
TMEM116-209ENST00000550020 STAP2Q9UGK3 403 aa10.98□□□□□ -0.65
TMEM116-209ENST00000550020 TRPM3Q9HCF6 1732 aaPredicted RBP10.98□□□□□ -0.65
TMEM116-209ENST00000550020 EIF2S2P20042 333 aaKnown RBP10.97□□□□□ -0.65
TMEM116-209ENST00000550020 MCM2P49736 904 aa10.97□□□□□ -0.65
TMEM116-209ENST00000550020 L1TD1Q5T7N2 865 aaKnown RBP10.97□□□□□ -0.65
TMEM116-209ENST00000550020 ERC1Q8IUD2 1116 aa10.97□□□□□ -0.65
TMEM116-209ENST00000550020 NECTIN2Q92692 538 aa10.97□□□□□ -0.65
TMEM116-209ENST00000550020 LRRC59Q96AG4 307 aaKnown RBP10.97□□□□□ -0.65
TMEM116-209ENST00000550020 USP44Q9H0E7 712 aa10.97□□□□□ -0.65
TMEM116-209ENST00000550020 LGR6Q9HBX8 967 aa10.97□□□□□ -0.65
TMEM116-209ENST00000550020 LRRFIP2Q9Y608 721 aaKnown RBP10.97□□□□□ -0.65
TMEM116-209ENST00000550020 KDM3BQ7LBC6 1761 aa10.96□□□□□ -0.65
TMEM116-209ENST00000550020 TMEM94Q12767 1356 aa10.96□□□□□ -0.65
TMEM116-209ENST00000550020 ERBB3P21860 1342 aa10.96□□□□□ -0.65
TMEM116-209ENST00000550020 GOLGA6L22H0YM25 854 aa10.96□□□□□ -0.65
TMEM116-209ENST00000550020 APBB1O00213 710 aa10.96□□□□□ -0.65
TMEM116-209ENST00000550020 MCM4P33991 863 aa10.96□□□□□ -0.65
TMEM116-209ENST00000550020 SKOR2Q2VWA4 1001 aaPredicted RBP10.96□□□□□ -0.65
TMEM116-209ENST00000550020 MPRIPQ6WCQ1 1025 aa10.96□□□□□ -0.65
TMEM116-209ENST00000550020 C16orf71Q8IYS4 520 aaPredicted RBP10.96□□□□□ -0.65
TMEM116-209ENST00000550020 KIF1BPQ96EK5 621 aa10.96□□□□□ -0.65
TMEM116-209ENST00000550020 USP26Q9BXU7 913 aa10.96□□□□□ -0.65
TMEM116-209ENST00000550020 CWC22Q9HCG8 908 aaKnown RBP10.96□□□□□ -0.65
TMEM116-209ENST00000550020 CHPF2Q9P2E5 772 aa10.96□□□□□ -0.65
TMEM116-209ENST00000550020 SMARCA5O60264 1052 aaPredicted RBP10.95□□□□□ -0.66
TMEM116-209ENST00000550020 GIGYF1O75420 1035 aaPredicted RBP10.95□□□□□ -0.66
TMEM116-209ENST00000550020 XPCQ01831 940 aaPredicted RBP10.95□□□□□ -0.66
TMEM116-209ENST00000550020 POLA2Q14181 598 aa10.95□□□□□ -0.66
TMEM116-209ENST00000550020 BEND3Q5T5X7 828 aa10.95□□□□□ -0.66
TMEM116-209ENST00000550020 KSR2Q6VAB6 950 aa10.95□□□□□ -0.66
TMEM116-209ENST00000550020 GPATCH3Q96I76 525 aa10.95□□□□□ -0.66
TMEM116-209ENST00000550020 ISY1Q9ULR0 285 aaKnown RBP10.95□□□□□ -0.66
TMEM116-209ENST00000550020 EXOC6BQ9Y2D4 811 aa10.95□□□□□ -0.66
TMEM116-209ENST00000550020 TNS3Q68CZ2 1445 aa10.94□□□□□ -0.66
TMEM116-209ENST00000550020 HEG1Q9ULI3 1381 aa10.94□□□□□ -0.66
TMEM116-209ENST00000550020 PI4KAP2A4QPH2 592 aa10.94□□□□□ -0.66
TMEM116-209ENST00000550020 SURF6O75683 361 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms