RNA–Protein interactions for RNA: ENST00000549840.1

ATP2A2-208, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 5

Gene ATP2A2, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-208ENST00000549840 CHL1O00533 1208 aa10.55□□□□□ -0.72
ATP2A2-208ENST00000549840 PRIM1P49642 420 aaKnown RBP10.55□□□□□ -0.72
ATP2A2-208ENST00000549840 FAM196AQ6ZSG2 479 aa10.55□□□□□ -0.72
ATP2A2-208ENST00000549840 SYTL4Q96C24 671 aaPredicted RBP10.55□□□□□ -0.72
ATP2A2-208ENST00000549840 ACSBG1Q96GR2 724 aa10.55□□□□□ -0.72
ATP2A2-208ENST00000549840 MYH16Q9H6N6 1097 aa10.55□□□□□ -0.72
ATP2A2-208ENST00000549840 BABAM1Q9NWV8 329 aa10.55□□□□□ -0.72
ATP2A2-208ENST00000549840 TMOD3Q9NYL9 352 aa10.55□□□□□ -0.72
ATP2A2-208ENST00000549840 BRWD3Q6RI45 1802 aa10.54□□□□□ -0.72
ATP2A2-208ENST00000549840 BTBD11A6QL63 1104 aa10.54□□□□□ -0.72
ATP2A2-208ENST00000549840 TRMT2AQ8IZ69 625 aaKnown RBP10.54□□□□□ -0.72
ATP2A2-208ENST00000549840 PIGBQ92521 554 aa10.54□□□□□ -0.72
ATP2A2-208ENST00000549840 TSR2Q969E8 191 aaKnown RBP10.54□□□□□ -0.72
ATP2A2-208ENST00000549840 MBIPQ9NS73 344 aa10.54□□□□□ -0.72
ATP2A2-208ENST00000549840 MIS18AQ9NYP9 233 aa10.54□□□□□ -0.72
ATP2A2-208ENST00000549840 FANCIQ9NVI1 1328 aa10.54□□□□□ -0.72
ATP2A2-208ENST00000549840 DOT1LQ8TEK3 1739 aa10.53□□□□□ -0.72
ATP2A2-208ENST00000549840 KCNQ2O43526 872 aa10.53□□□□□ -0.72
ATP2A2-208ENST00000549840 DUSP27Q5VZP5 1158 aa10.53□□□□□ -0.72
ATP2A2-208ENST00000549840 TSPYL4Q9UJ04 414 aa10.53□□□□□ -0.72
ATP2A2-208ENST00000549840 SLC39A6Q13433 755 aa10.52□□□□□ -0.73
ATP2A2-208ENST00000549840 ZNF790Q6PG37 636 aa10.52□□□□□ -0.73
ATP2A2-208ENST00000549840 PTF1AQ7RTS3 328 aa10.52□□□□□ -0.73
ATP2A2-208ENST00000549840 SIPA1L3O60292 1781 aaPredicted RBP10.52□□□□□ -0.73
ATP2A2-208ENST00000549840 KCNQ3O43525 872 aa10.51□□□□□ -0.73
ATP2A2-208ENST00000549840 TTC5Q8N0Z6 440 aa10.51□□□□□ -0.73
ATP2A2-208ENST00000549840 ATG3Q9NT62 314 aa10.51□□□□□ -0.73
ATP2A2-208ENST00000549840 ASAP1Q9ULH1 1129 aa10.51□□□□□ -0.73
ATP2A2-208ENST00000549840 NHSQ6T4R5 1651 aa10.5□□□□□ -0.73
ATP2A2-208ENST00000549840 VIRMAQ69YN4 1812 aaKnown RBP10.5□□□□□ -0.73
ATP2A2-208ENST00000549840 EIF4A1P60842 406 aaKnown RBP10.5□□□□□ -0.73
ATP2A2-208ENST00000549840 EXOSC9Q06265 439 aaKnown RBP10.5□□□□□ -0.73
ATP2A2-208ENST00000549840 BCL11BQ9C0K0 894 aaPredicted RBP10.5□□□□□ -0.73
ATP2A2-208ENST00000549840 TRIM37O94972 964 aa10.49□□□□□ -0.73
ATP2A2-208ENST00000549840 KRT24Q2M2I5 525 aa10.49□□□□□ -0.73
ATP2A2-208ENST00000549840 C8orf58Q8NAV2 365 aa10.49□□□□□ -0.73
ATP2A2-208ENST00000549840 ZNF496Q96IT1 587 aaPredicted RBP10.49□□□□□ -0.73
ATP2A2-208ENST00000549840 KDM3BQ7LBC6 1761 aa10.49□□□□□ -0.73
ATP2A2-208ENST00000549840 ITGB4P16144 1822 aa10.49□□□□□ -0.73
ATP2A2-208ENST00000549840 PAPPAQ13219 1627 aa10.48□□□□□ -0.73
ATP2A2-208ENST00000549840 PTCD1O75127 700 aaKnown RBP10.48□□□□□ -0.73
ATP2A2-208ENST00000549840 SMARCC1Q92922 1105 aaPredicted RBP10.48□□□□□ -0.73
ATP2A2-208ENST00000549840 FMNL2Q96PY5 1086 aa10.48□□□□□ -0.73
ATP2A2-208ENST00000549840 PALLDQ8WX93 1383 aa10.48□□□□□ -0.73
ATP2A2-208ENST00000549840 HEG1Q9ULI3 1381 aa10.48□□□□□ -0.73
ATP2A2-208ENST00000549840 KCPQ6ZWJ8 1503 aa10.48□□□□□ -0.73
ATP2A2-208ENST00000549840 ELL2O00472 640 aaPredicted RBP10.47□□□□□ -0.73
ATP2A2-208ENST00000549840 TWISTNBQ3B726 338 aaPredicted RBP10.47□□□□□ -0.73
ATP2A2-208ENST00000549840 TSPYL6Q8N831 410 aa10.47□□□□□ -0.73
ATP2A2-208ENST00000549840 SBF2Q86WG5 1849 aa10.47□□□□□ -0.73
ATP2A2-208ENST00000549840 GIGYF1O75420 1035 aaPredicted RBP10.46□□□□□ -0.73
ATP2A2-208ENST00000549840 RBM42Q9BTD8 480 aaKnown RBP10.46□□□□□ -0.73
ATP2A2-208ENST00000549840 SOS1Q07889 1333 aaPredicted RBP10.46□□□□□ -0.73
ATP2A2-208ENST00000549840 BTAF1O14981 1849 aa10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 UBR2Q8IWV8 1755 aa10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 LOC102724428A0A0B4J2F2 783 aa10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 PRAMEF22A3QJZ6 481 aa10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 VAMP4O75379 141 aa10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 CENPBP07199 599 aaPredicted RBP10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 HOXB7P09629 217 aa10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 SNRPA1P09661 255 aaKnown RBP10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 CT47B1P0C2W7 299 aaPredicted RBP10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 SIK1P57059 783 aa10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 VSIG10Q8N0Z9 540 aa10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 SLC4A9Q96Q91 983 aa10.45□□□□□ -0.74
ATP2A2-208ENST00000549840 APBA3O96018 575 aa10.44□□□□□ -0.74
ATP2A2-208ENST00000549840 KAT6BQ8WYB5 2073 aa10.44□□□□□ -0.74
ATP2A2-208ENST00000549840 ATP6V1AP38606 617 aa10.43□□□□□ -0.74
ATP2A2-208ENST00000549840 HDGFL1Q5TGJ6 251 aa10.43□□□□□ -0.74
ATP2A2-208ENST00000549840 DNAJC10Q8IXB1 793 aa10.43□□□□□ -0.74
ATP2A2-208ENST00000549840 ZNF428Q96B54 188 aa10.43□□□□□ -0.74
ATP2A2-208ENST00000549840 TEX13AQ9BXU3 409 aaPredicted RBP10.43□□□□□ -0.74
ATP2A2-208ENST00000549840 USP16Q9Y5T5 823 aa10.43□□□□□ -0.74
ATP2A2-208ENST00000549840 PLSCR1O15162 318 aa10.42□□□□□ -0.74
ATP2A2-208ENST00000549840 EIF2S2P20042 333 aaKnown RBP10.42□□□□□ -0.74
ATP2A2-208ENST00000549840 RARSP54136 660 aaKnown RBP10.42□□□□□ -0.74
ATP2A2-208ENST00000549840 SF3B2Q13435 895 aaKnown RBP10.42□□□□□ -0.74
ATP2A2-208ENST00000549840 ITPK1Q13572 414 aa10.42□□□□□ -0.74
ATP2A2-208ENST00000549840 CCDC30Q5VVM6 783 aa10.42□□□□□ -0.74
ATP2A2-208ENST00000549840 NECTIN2Q92692 538 aa10.42□□□□□ -0.74
ATP2A2-208ENST00000549840 CHMP4AQ9BY43 222 aa10.42□□□□□ -0.74
ATP2A2-208ENST00000549840 CCNL1Q9UK58 526 aaPredicted RBP10.42□□□□□ -0.74
ATP2A2-208ENST00000549840 RCAN3Q9UKA8 241 aa10.42□□□□□ -0.74
ATP2A2-208ENST00000549840 TNS1Q9HBL0 1735 aaKnown RBP10.41□□□□□ -0.74
ATP2A2-208ENST00000549840 TCERG1O14776 1098 aaKnown RBP10.41□□□□□ -0.74
ATP2A2-208ENST00000549840 STARD3NLO95772 234 aa10.41□□□□□ -0.74
ATP2A2-208ENST00000549840 KCNQ4P56696 695 aa10.41□□□□□ -0.74
ATP2A2-208ENST00000549840 ALDH1L2Q3SY69 923 aa10.41□□□□□ -0.74
ATP2A2-208ENST00000549840 SLC27A3Q5K4L6 730 aa10.41□□□□□ -0.74
ATP2A2-208ENST00000549840 CCDC125Q86Z20 511 aa10.41□□□□□ -0.74
ATP2A2-208ENST00000549840 SSH1Q8WYL5 1049 aa10.41□□□□□ -0.74
ATP2A2-208ENST00000549840 C5P01031 1676 aa10.41□□□□□ -0.74
ATP2A2-208ENST00000549840 CYP19A1P11511 503 aaPredicted RBP10.4□□□□□ -0.74
ATP2A2-208ENST00000549840 TXNRD1Q16881 649 aa10.4□□□□□ -0.74
ATP2A2-208ENST00000549840 PROM2Q8N271 834 aa10.4□□□□□ -0.74
ATP2A2-208ENST00000549840 BCL2L13Q9BXK5 485 aa10.4□□□□□ -0.74
ATP2A2-208ENST00000549840 STK31Q9BXU1 1019 aa10.4□□□□□ -0.74
ATP2A2-208ENST00000549840 LRRC4BQ9NT99 713 aa10.4□□□□□ -0.74
ATP2A2-208ENST00000549840 SMC4Q9NTJ3 1288 aa10.4□□□□□ -0.74
ATP2A2-208ENST00000549840 CHPF2Q9P2E5 772 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms